Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40572 Trifolium pratense HOM05D008368 ORTHO05D010489 4.4e-25 117.5 73 100.0
TPR.G30669 Trifolium pratense HOM05D008368 ORTHO05D010489 2.1e-19 98.6 78 85.9
TPR.G30686 Trifolium pratense HOM05D008368 ORTHO05D010489 2.6e-17 91.7 74 85.1
TPR.G40393 Trifolium pratense HOM05D008368 ORTHO05D010489 2.2e-16 88.6 46 97.8
Psat1g182840 Pisum sativum HOM05D008368 ORTHO05D010489 4.9e-16 87.4 73 71.2
Medtr2g022540 Medicago truncatula HOM05D008368 ORTHO05D010489 8.3e-16 86.7 73 64.4
Ca_00633_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 2.4e-15 85.1 46 93.5
Ca_00655_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 2.7e-14 81.6 73 75.3
arahy.Tifrunner.gnm1.ann1.121ATL Arachis hypogaea HOM05D008368 ORTHO05D010489 3.3e-12 74.7 71 63.4
arahy.Tifrunner.gnm1.ann1.IPV0IY Arachis hypogaea HOM05D008368 ORTHO05D010489 3.3e-12 74.7 71 63.4
Glyma.13G207400 Glycine max HOM05D008368 ORTHO05D010489 7.3e-12 73.6 71 63.4
Phvul.006G152200 Phaseolus vulgaris HOM05D008368 ORTHO05D010489 1.6e-11 72.4 66 63.6
MELO3C006556.2 Cucumis melo HOM05D008368 ORTHO05D010489 2.2e-08 62.0 38 71.1
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 2.9e-08 61.6 63 54.0
Cc03_g03240 Coffea canephora HOM05D008368 ORTHO05D010489 3.7e-08 61.2 37 73.0
Potri.008G203800 Populus trichocarpa HOM05D008368 ORTHO05D010489 8.3e-08 60.1 38 71.1
CsaV3_3G013620 Cucumis sativus L. HOM05D008368 ORTHO05D010489 2.4e-07 58.5 39 66.7
AUR62038060 Chenopodium quinoa HOM05D008368 ORTHO05D010489 3.2e-07 58.2 33 75.8
AUR62038186 Chenopodium quinoa HOM05D008368 ORTHO05D010489 3.2e-07 58.2 33 75.8
SalBow2G2001 Salvia bowleyana HOM05D008368 ORTHO05D010489 5.4e-07 57.4 37 64.9
Actinidia08510 Actinidia chinensis HOM05D008368 ORTHO05D010489 7.0e-07 57.0 36 63.9
CSS0036726 Camellia sinensis var. sinensis HOM05D008368 ORTHO05D010489 7.0e-07 57.0 34 70.6
ClCG05G005370 Citrullus lanatus HOM05D008368 ORTHO05D010489 7.0e-07 57.0 39 66.7
Prupe.1G152900 Prunus persica HOM05D008368 ORTHO05D010489 9.2e-07 56.6 34 67.6
Zm00001eb353800 Zea mays HOM05D038576 ORTHO05D010489 9.2e-07 56.6 37 64.9
unitig_32.g10803 Utricularia gibba HOM05D008368 ORTHO05D010489 1.2e-06 56.2 34 67.6
FvH4_4g14770 Fragaria vesca HOM05D008368 ORTHO05D010489 1.6e-06 55.8 38 68.4
FAN07G1534 Fragaria x ananassa HOM05D008368 ORTHO05D010489 1.6e-06 55.8 38 68.4
FAN17G1872 Fragaria x ananassa HOM05D008368 ORTHO05D010489 1.6e-06 55.8 38 68.4
Lsat_1_v5_gn_7_68141 Lactuca sativa HOM05D008368 ORTHO05D010489 1.6e-06 55.8 32 71.9
Os05g0532800 Oryza sativa ssp. japonica HOM05D038576 ORTHO05D010489 1.6e-06 55.8 38 63.2
EL10Ac3g06405 Beta vulgaris HOM05D008368 ORTHO05D010489 2.0e-06 55.5 34 70.6
EL10Ac3g06406 Beta vulgaris HOM05D008368 ORTHO05D010489 2.0e-06 55.5 34 70.6
THA.LOC104818801 Tarenaya hassleriana HOM05D008368 ORTHO05D010489 2.0e-06 55.5 61 44.3
MD13G1185300 Malus domestica HOM05D008368 ORTHO05D010489 2.7e-06 55.1 33 66.7
Sed0011273 Sechium edule HOM05D008368 ORTHO05D010489 2.7e-06 55.1 34 67.6
Sc13g0004110 Simmondsia chinensis HOM05D008368 ORTHO05D010489 2.7e-06 55.1 33 66.7
VMungo0540G0881 Vigna mungo HOM05D008368 ORTHO05D010489 4.6e-06 54.3 59 54.2
Ah.13g074090 Amaranthus hybridus HOM05D008368 ORTHO05D010489 7.8e-06 53.5 63 46.0
FAN22G0200 Fragaria x ananassa HOM05D008368 ORTHO05D010489 7.8e-06 53.5 38 63.2


User provided reference genes

Program Settings