Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40500 Trifolium pratense HOM05D007867 ORTHO05D009953 1.3e-09 64.7 29 100.0
CSS0005733 Camellia sinensis var. sinensis HOM05D007867 ORTHO05D009953 3.9e-09 63.2 29 96.6
ATR0800G156 Amborella trichopoda HOM05D007867 ORTHO05D009953 5.1e-09 62.8 29 96.6
Nn1g05680 Nelumbo nucifera HOM05D007867 ORTHO05D009953 5.1e-09 62.8 29 96.6
Thecc.01G083600 Theobroma cacao HOM05D007867 ORTHO05D009953 5.1e-09 62.8 29 96.6
GSVIVG01006775001 Vitis vinifera HOM05D007867 ORTHO05D009953 8.7e-09 62.0 27 100.0
CiPaw.07G042200 Carya illinoinensis HOM05D007867 ORTHO05D009953 3.3e-08 60.1 27 96.3
Dinv36978 Davidia involucrata HOM05D007867 ORTHO05D009953 3.3e-08 60.1 27 96.3
Gohir.D03G034400 Gossypium hirsutum HOM05D007867 ORTHO05D009953 3.3e-08 60.1 27 96.3
Gorai.003G036100 Gossypium raimondii HOM05D007867 ORTHO05D009953 3.3e-08 60.1 27 96.3
Lalb_Chr09g0325761 Lupinus albus HOM05D007867 ORTHO05D009953 3.3e-08 60.1 27 96.3
Manes.13G104200 Manihot esculenta HOM05D007867 ORTHO05D009953 3.3e-08 60.1 27 96.3
Nn5g29770 Nelumbo nucifera HOM05D007867 ORTHO05D009953 3.3e-08 60.1 27 96.3
Actinidia36378 Actinidia chinensis HOM05D007867 ORTHO05D009953 4.3e-08 59.7 26 100.0
CiPaw.08G145800 Carya illinoinensis HOM05D007867 ORTHO05D009953 4.3e-08 59.7 29 93.1
Gohir.A11G209001 Gossypium hirsutum HOM05D007867 ORTHO05D009953 4.3e-08 59.7 28 92.9
vmacro19595 Vaccinium macrocarpon HOM05D007867 ORTHO05D009953 7.4e-08 58.9 27 92.6
Medtr5g030870 Medicago truncatula HOM05D007867 ORTHO05D009953 2.1e-07 57.4 25 100.0
CiPaw.05G026800 Carya illinoinensis HOM05D007867 ORTHO05D009953 2.8e-07 57.0 27 96.3
Zm00001eb061250 Zea mays HOM05D007867 ORTHO05D009953 2.8e-07 57.0 33 84.8
Sed0014306 Sechium edule HOM05D007867 ORTHO05D009953 4.8e-07 56.2 29 93.1
Oeu033792.2 Olea europaea HOM05D007867 ORTHO05D009953 6.2e-07 55.8 26 96.2
CSS0034185 Camellia sinensis var. sinensis HOM05D007867 ORTHO05D009953 8.1e-07 55.5 24 100.0
EL10Ac9g22129 Beta vulgaris HOM05D007867 ORTHO05D009953 1.1e-06 55.1 27 88.9
Cc07_g07830 Coffea canephora HOM05D007867 ORTHO05D009953 1.4e-06 54.7 28 89.3
FvH4_1g18950 Fragaria vesca HOM05D007867 ORTHO05D009953 1.4e-06 54.7 30 86.7
FAN28G0366 Fragaria x ananassa HOM05D007867 ORTHO05D009953 1.4e-06 54.7 30 86.7
RcHm_v2.0_Chr2g0109971 Rosa chinensis HOM05D007867 ORTHO05D009953 1.4e-06 54.7 30 86.7
RhsimUnG0066800 Rhododendron simsii HOM05D007867 ORTHO05D009953 2.4e-06 53.9 42 66.7
CiPaw.08G145600 Carya illinoinensis HOM05D007867 ORTHO05D009953 3.1e-06 53.5 31 83.9
Ciclev10027423m.g Citrus clementina HOM05D007867 ORTHO05D009953 3.1e-06 53.5 24 95.8
Haze_03934 Corylus avellana HOM05D007867 ORTHO05D009953 3.1e-06 53.5 24 95.8
Glyma.09G202700 Glycine max HOM05D007867 ORTHO05D009953 3.1e-06 53.5 24 95.8
Gohir.A05G401300 Gossypium hirsutum HOM05D007867 ORTHO05D009953 3.1e-06 53.5 29 86.2
Hma1.2p1_1119F.1_g259180 Hydrangea macrophylla HOM05D007867 ORTHO05D009953 3.1e-06 53.5 24 95.8
Lalb_Chr16g0381471 Lupinus albus HOM05D007867 ORTHO05D009953 3.1e-06 53.5 24 95.8
Psat2g134360 Pisum sativum HOM05D007867 ORTHO05D009953 3.1e-06 53.5 24 95.8
Ca_13472_v3 Cicer arietinum L. HOM05D007867 ORTHO05D009953 5.3e-06 52.8 30 86.7
DCAR_021457 Daucus carota HOM05D000419 ORTHO05D000692 5.3e-06 52.8 30 86.7
Potri.015G025700 Populus trichocarpa HOM05D007867 ORTHO05D009953 9.0e-06 52.0 24 91.7
Sc03g0000590 Simmondsia chinensis HOM05D007867 ORTHO05D009953 9.0e-06 52.0 33 78.8


User provided reference genes

Program Settings