Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 8.4e-57 223.4 108 100.0
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 8.4e-57 223.4 108 100.0
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 3.3e-21 105.1 109 45.9
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.8e-19 99.4 113 45.1
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 6.9e-19 97.4 108 45.4
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 9.1e-19 97.1 112 44.6
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 9.1e-19 97.1 109 44.0
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 1.2e-18 96.7 111 47.7
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-18 96.3 111 43.2
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 2.6e-18 95.5 112 44.6
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 3.4e-18 95.1 112 45.5
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 1.3e-17 93.2 113 43.4
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 2.2e-17 92.4 113 43.4
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-16 89.7 111 42.3
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-16 89.7 112 39.3
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 1.9e-16 89.4 112 42.9
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 1.9e-16 89.4 112 42.9
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.9e-16 89.4 109 40.4
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.5e-16 89.0 112 38.4
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-16 89.0 112 39.3
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 3.2e-16 88.6 115 45.2
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-16 87.8 112 38.4
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.5e-16 87.8 112 38.4
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 7.2e-16 87.4 108 38.0
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-16 87.4 112 42.0
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-15 86.3 112 36.6
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-15 86.3 112 38.4
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.6e-15 86.3 111 36.9
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.1e-15 85.9 112 38.4
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 2.1e-15 85.9 112 39.3
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-15 85.5 113 41.6
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.7e-15 85.5 112 38.4
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.6e-15 85.1 112 37.5
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.7e-15 84.7 112 37.5
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.7e-15 84.7 112 37.5
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-14 83.6 110 39.1
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.8e-14 82.8 112 37.5
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 1.8e-14 82.8 112 38.4
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-14 82.4 112 37.5
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.2e-14 81.3 110 38.2
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 8.8e-14 80.5 112 41.1
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-13 80.1 112 34.8
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-13 79.7 91 40.7
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-13 79.7 112 35.7
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-13 79.3 112 36.6
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 2.0e-13 79.3 72 50.0
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 2.0e-13 79.3 111 35.1
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-13 79.0 112 39.3
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.4e-13 78.2 111 37.8
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 4.4e-13 78.2 112 35.7
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.7e-13 77.8 112 35.7
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 5.7e-13 77.8 110 34.5
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-12 76.6 105 37.1
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 1.7e-12 76.3 111 36.9
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.8e-12 75.5 111 36.9
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.8e-12 75.5 113 35.4
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.7e-12 75.1 95 37.9
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 8.2e-12 73.9 104 40.4
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-11 73.2 113 37.2
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.8e-11 72.8 112 37.5
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.8e-11 72.8 111 34.2
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 2.4e-11 72.4 112 37.5
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.1e-11 71.6 113 34.5
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.1e-11 71.6 113 35.4
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 5.3e-11 71.2 80 47.5
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 5.3e-11 71.2 80 47.5
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 5.3e-11 71.2 113 36.3
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.5e-10 68.2 111 33.3
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 4.5e-10 68.2 106 32.1
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.9e-10 67.8 111 32.4
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.9e-10 67.8 112 33.0
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 7.7e-10 67.4 91 40.7
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-09 67.0 111 31.5
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.3e-09 66.6 110 32.7
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.3e-09 66.6 110 32.7
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-09 66.6 71 49.3
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.7e-09 66.2 110 31.8
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 1.7e-09 66.2 113 33.6
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 8.5e-09 63.9 113 30.1
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.5e-08 63.2 107 34.6
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 3.2e-08 62.0 110 33.6
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-08 62.0 108 34.3
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-08 62.0 113 32.7
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-08 62.0 108 34.3
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.2e-08 62.0 113 32.7
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 4.2e-08 61.6 112 30.4
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 5.5e-08 61.2 110 34.5
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 5.5e-08 61.2 107 34.6
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 7.2e-08 60.8 83 37.3
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.6e-07 59.7 113 33.6
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.6e-07 59.7 110 31.8
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 4.7e-07 58.2 107 32.7
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 8.0e-07 57.4 104 31.7
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-06 56.6 107 33.6
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-06 56.6 107 33.6
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.4e-06 56.6 107 33.6
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.4e-06 56.6 102 35.3
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.3e-06 55.8 89 36.0
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 3.0e-06 55.5 106 31.1
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 5.2e-06 54.7 89 36.0
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.2e-06 54.7 105 28.6


User provided reference genes

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