Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40417 Trifolium pratense HOM05D000382 ORTHO05D413256 9.0e-28 126.7 91 100.0
Psat5g257080 Pisum sativum HOM05D000382 ORTHO05D000391 2.1e-16 89.0 49 91.8
Medtr2g086420 Medicago truncatula HOM05D000382 ORTHO05D000391 1.4e-15 86.3 51 90.2
Ca_01663_v3 Cicer arietinum L. HOM05D000382 ORTHO05D000391 1.9e-14 82.4 51 86.3
arahy.Tifrunner.gnm1.ann1.J1CFJJ Arachis hypogaea HOM05D000382 ORTHO05D000391 4.1e-12 74.7 48 72.9
Phvul.005G124100 Phaseolus vulgaris HOM05D000382 ORTHO05D000391 3.4e-11 71.6 48 77.1
VMungo1080G1439 Vigna mungo HOM05D000382 ORTHO05D000391 3.4e-11 71.6 48 77.1
Glyma.12G184500 Glycine max HOM05D000382 ORTHO05D000391 3.8e-10 68.2 48 75.0
arahy.Tifrunner.gnm1.ann1.980X4K Arachis hypogaea HOM05D000382 ORTHO05D000391 6.5e-10 67.4 49 69.4
Glyma.13G316900 Glycine max HOM05D000382 ORTHO05D000391 3.2e-09 65.1 49 73.5
Glyma.12G088700 Glycine max HOM05D000382 ORTHO05D000391 1.2e-08 63.2 53 67.9
Glyma.11G183700 Glycine max HOM05D000382 ORTHO05D000391 1.6e-08 62.8 53 69.8
Lalb_Chr01g0004841 Lupinus albus HOM05D000382 ORTHO05D000391 2.1e-08 62.4 47 66.0
VMungo1127G2201 Vigna mungo HOM05D000382 ORTHO05D000391 4.7e-08 61.2 53 66.0
Phvul.011G093700 Phaseolus vulgaris HOM05D000382 ORTHO05D000391 7.9e-08 60.5 53 66.0
Prupe.6G129100 Prunus persica HOM05D000382 ORTHO05D000391 1.4e-07 59.7 50 66.0
TAR636G2058 Trochodendron aralioides HOM05D000382 ORTHO05D000391 1.8e-07 59.3 39 76.9
Duzib150G1096 Durio zibethinus HOM05D000382 ORTHO05D000391 3.9e-07 58.2 52 65.4
GSVIVG01036134001 Vitis vinifera HOM05D000382 ORTHO05D000391 5.1e-07 57.8 50 66.0
Thecc.09G284400 Theobroma cacao HOM05D000382 ORTHO05D000391 6.7e-07 57.4 52 63.5
Gohir.A09G095400 Gossypium hirsutum HOM05D000382 ORTHO05D000391 1.5e-06 56.2 52 61.5
Dinv29476 Davidia involucrata HOM05D000382 ORTHO05D000391 2.6e-06 55.5 51 64.7
Duzib170G0404 Durio zibethinus HOM05D000382 ORTHO05D000391 2.6e-06 55.5 52 63.5
DCAR_006160 Daucus carota HOM05D000382 ORTHO05D000391 5.7e-06 54.3 42 61.9
MD11G1164300 Malus domestica HOM05D000382 ORTHO05D000391 7.4e-06 53.9 41 68.3
arahy.Tifrunner.gnm1.ann1.EH3L7F Arachis hypogaea HOM05D000382 ORTHO05D000391 9.7e-06 53.5 41 70.7
arahy.Tifrunner.gnm1.ann1.LTZY89 Arachis hypogaea HOM05D000382 ORTHO05D000391 9.7e-06 53.5 41 70.7
arahy.Tifrunner.gnm1.ann1.S1DMKE Arachis hypogaea HOM05D000382 ORTHO05D000391 9.7e-06 53.5 41 70.7
CSS0015217 Camellia sinensis var. sinensis HOM05D000382 ORTHO05D000391 9.7e-06 53.5 50 60.0
CiPaw.13G136400 Carya illinoinensis HOM05D000382 ORTHO05D000391 9.7e-06 53.5 38 71.1
QL01p012343 Quercus lobata HOM05D000382 ORTHO05D000391 9.7e-06 53.5 48 64.6


User provided reference genes

Program Settings