Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40416 Trifolium pratense HOM05D000334 ORTHO05D030157 4.5e-40 167.5 89 100.0
TPR.G2695 Trifolium pratense HOM05D001341 ORTHO05D030157 4.7e-37 157.5 89 94.4
TPR.G23938 Trifolium pratense HOM05D000334 ORTHO05D030157 1.4e-36 156.0 88 94.3
TPR.G32769 Trifolium pratense HOM05D000334 ORTHO05D000200 5.9e-24 114.0 164 48.2
Medtr1g041155 Medicago truncatula HOM05D000334 ORTHO05D000200 1.3e-18 96.3 159 44.0
Psat6g137000 Pisum sativum HOM05D000334 ORTHO05D000200 2.2e-18 95.5 163 43.6
Ca_01766_v3 Cicer arietinum L. HOM05D000334 ORTHO05D000200 1.5e-14 82.8 163 39.3
VMungo0720G2938 Vigna mungo HOM05D000334 ORTHO05D000200 3.7e-10 68.2 152 34.9
Phvul.007G279300 Phaseolus vulgaris HOM05D000334 ORTHO05D000200 8.3e-10 67.0 91 46.2
Glyma.02G001700 Glycine max HOM05D000334 ORTHO05D000200 2.4e-09 65.5 92 46.7
Ca_09884_v3 Cicer arietinum L. HOM05D000334 ORTHO05D000200 3.1e-09 65.1 152 34.2
Glyma.10G002100 Glycine max HOM05D000334 ORTHO05D000200 7.0e-09 63.9 71 50.7
Glyma.10G179100 Glycine max HOM05D000334 ORTHO05D000200 9.2e-09 63.5 161 32.9
Psat6g113840 Pisum sativum HOM05D000334 ORTHO05D000200 1.2e-08 63.2 152 32.9
TPR.G14028 Trifolium pratense HOM05D000334 ORTHO05D000200 1.6e-08 62.8 152 34.2
Glyma.20G211100 Glycine max HOM05D000334 ORTHO05D000200 2.0e-08 62.4 153 32.7
arahy.Tifrunner.gnm1.ann1.37XEK7 Arachis hypogaea HOM05D000334 ORTHO05D000200 3.5e-08 61.6 144 33.3
arahy.Tifrunner.gnm1.ann1.RX1L3G Arachis hypogaea HOM05D000334 ORTHO05D000200 4.5e-08 61.2 144 33.3
Phvul.007G110800 Phaseolus vulgaris HOM05D000334 ORTHO05D000200 4.5e-08 61.2 148 33.8
Dinv14068 Davidia involucrata HOM05D000334 ORTHO05D000200 1.3e-07 59.7 57 49.1
VMungo0720G1211 Vigna mungo HOM05D000334 ORTHO05D000200 1.3e-07 59.7 157 32.5
Lalb_Chr19g0127841 Lupinus albus HOM05D000334 ORTHO05D000200 3.9e-07 58.2 144 33.3
Medtr1g103610 Medicago truncatula HOM05D000334 ORTHO05D030157 3.9e-07 58.2 30 90.0
CSS0033897 Camellia sinensis var. sinensis HOM05D000334 ORTHO05D000200 5.0e-07 57.8 56 51.8
Prupe.8G233100 Prunus persica HOM05D000334 ORTHO05D000200 5.0e-07 57.8 61 49.2
Lj5g0001975 Lotus japonicus HOM05D000334 ORTHO05D000200 6.6e-07 57.4 138 33.3
Actinidia40103 Actinidia chinensis HOM05D000334 ORTHO05D000200 8.6e-07 57.0 43 58.1
Ciclev10020512m.g Citrus clementina HOM05D000334 ORTHO05D000200 8.6e-07 57.0 90 36.7
CSS0041713 Camellia sinensis var. sinensis HOM05D000334 ORTHO05D000200 1.1e-06 56.6 56 51.8
Lalb_Chr21g0311931 Lupinus albus HOM05D000334 ORTHO05D000200 1.1e-06 56.6 143 32.2
Medtr1g076500 Medicago truncatula HOM05D000334 ORTHO05D000200 1.1e-06 56.6 162 32.1
Gohir.A07G208200 Gossypium hirsutum HOM05D000334 ORTHO05D000200 1.5e-06 56.2 64 43.8
Gohir.D07G214200 Gossypium hirsutum HOM05D000334 ORTHO05D000200 1.5e-06 56.2 64 43.8
Gorai.001G242200 Gossypium raimondii HOM05D000334 ORTHO05D000200 1.5e-06 56.2 64 43.8
QL06p000443 Quercus lobata HOM05D000334 ORTHO05D000200 1.5e-06 56.2 144 31.9
Glyma.02G143100 Glycine max HOM05D000334 ORTHO05D000200 1.9e-06 55.8 74 40.5
Hma1.2p1_0172F.1_g076120 Hydrangea macrophylla HOM05D000334 ORTHO05D000200 1.9e-06 55.8 42 61.9
TAR636G1310 Trochodendron aralioides HOM05D000334 ORTHO05D000200 1.9e-06 55.8 56 53.6
Aqoxy2G03496 Aquilegia oxysepala HOM05D000334 ORTHO05D000200 2.5e-06 55.5 57 43.9
Glyma.10G031300 Glycine max HOM05D000334 ORTHO05D000200 2.5e-06 55.5 64 45.3
Gorai.004G218200 Gossypium raimondii HOM05D000334 ORTHO05D000200 2.5e-06 55.5 64 43.8
COL.COLO4_06094 Corchorus olitorius HOM05D000334 ORTHO05D000200 3.3e-06 55.1 69 40.6
Atru.chr5.1550 Acer truncatum HOM05D000334 ORTHO05D000200 4.3e-06 54.7 66 42.4
BcaNung00351 Brassica carinata HOM05D000334 ORTHO05D000200 4.3e-06 54.7 86 41.9
SEGI_38502 Sequoiadendron giganteum HOM05D000334 ORTHO05D000200 4.3e-06 54.7 51 51.0
ATR0665G015 Amborella trichopoda HOM05D000334 ORTHO05D000200 5.6e-06 54.3 62 48.4
CiPaw.03G256300 Carya illinoinensis HOM05D000334 ORTHO05D000200 5.6e-06 54.3 83 39.8
Duzib133G0145 Durio zibethinus HOM05D000334 ORTHO05D000200 5.6e-06 54.3 64 42.2
Duzib211G0605 Durio zibethinus HOM05D000334 ORTHO05D000200 5.6e-06 54.3 62 43.5
Gohir.A08G187800 Gossypium hirsutum HOM05D000334 ORTHO05D000200 5.6e-06 54.3 64 42.2
PSO210G3762 Papaver somniferum HOM05D000334 ORTHO05D000200 5.6e-06 54.3 48 64.6
Potri.010G080600 Populus trichocarpa HOM05D000334 ORTHO05D000200 5.6e-06 54.3 58 51.7
Aa31LG8G9470 Aethionema arabicum HOM05D000334 ORTHO05D000200 7.3e-06 53.9 70 42.9
CSS0010805 Camellia sinensis var. sinensis HOM05D000334 ORTHO05D000200 7.3e-06 53.9 42 57.1
Dinv44602 Davidia involucrata HOM05D000334 ORTHO05D000200 7.3e-06 53.9 58 50.0
MD03G1256000 Malus domestica HOM05D000334 ORTHO05D000200 7.3e-06 53.9 40 60.0
Hund02873 Selenicereus undatus HOM05D000334 ORTHO05D000200 7.3e-06 53.9 29 75.9
TWI53G0477 Tripterygium wilfordii HOM05D000334 ORTHO05D000200 7.3e-06 53.9 58 50.0
CARHR220870 Cardamine hirsuta HOM05D000334 ORTHO05D000200 9.5e-06 53.5 58 48.3
CsaV3_3G012760 Cucumis sativus L. HOM05D000334 ORTHO05D000200 9.5e-06 53.5 49 49.0
Sp7g12720 Schrenkiella parvula HOM05D000334 ORTHO05D000200 9.5e-06 53.5 90 40.0
TWI73G0502 Tripterygium wilfordii HOM05D000334 ORTHO05D000200 9.5e-06 53.5 57 47.4


User provided reference genes

Program Settings