Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4039 Trifolium pratense HOM05D010505 ORTHO05D014594 3.1e-162 575.1 296 100.0
TPR.G21558 Trifolium pratense HOM05D010505 ORTHO05D014594 1.2e-132 476.9 298 85.2
TPR.G23982 Trifolium pratense HOM05D010505 ORTHO05D014594 7.1e-66 255.0 323 52.0
TPR.G22082 Trifolium pratense HOM05D010505 ORTHO05D014594 5.3e-61 238.8 315 49.5
TPR.G29155 Trifolium pratense HOM05D010505 ORTHO05D014594 2.6e-60 236.5 271 53.9
TPR.G23185 Trifolium pratense HOM05D010505 ORTHO05D014594 2.8e-54 216.5 316 48.1
Psat3g080800 Pisum sativum HOM05D010505 ORTHO05D014594 1.0e-48 198.0 341 43.7
Ca_08700_v3 Cicer arietinum L. HOM05D010505 ORTHO05D014594 3.0e-48 196.4 326 45.7
Psat3g087040 Pisum sativum HOM05D010505 ORTHO05D014594 1.7e-43 180.6 342 39.5
Psat1g108920 Pisum sativum HOM05D010505 ORTHO05D014594 4.7e-41 172.6 364 38.2
Psat3g088000 Pisum sativum HOM05D010505 ORTHO05D014594 4.8e-38 162.5 301 40.9
Psat0s698g0080 Pisum sativum HOM05D010505 ORTHO05D014594 1.4e-37 161.0 341 37.5
TPR.G8383 Trifolium pratense HOM05D010505 ORTHO05D014594 8.0e-25 118.6 232 39.2
Glyma.02G162200 Glycine max HOM05D000333 ORTHO05D000190 3.5e-12 76.6 184 35.9
Glyma.10G101900 Glycine max HOM05D000333 ORTHO05D000190 8.6e-11 72.0 201 34.3
Phvul.007G244400 Phaseolus vulgaris HOM05D010505 ORTHO05D000190 1.9e-10 70.9 194 36.6
Ca_11231_v3 Cicer arietinum L. HOM05D000333 ORTHO05D000190 2.8e-09 67.0 127 37.0
Lalb_Chr09g0328931 Lupinus albus HOM05D010505 ORTHO05D000190 4.7e-09 66.2 221 32.6
Oeu023841.1 Olea europaea HOM05D000333 ORTHO05D000190 6.1e-09 65.9 174 35.6
COL.COLO4_06932 Corchorus olitorius HOM05D000333 ORTHO05D000190 1.4e-08 64.7 82 46.3
Lalb_Chr05g0219851 Lupinus albus HOM05D000333 ORTHO05D000190 3.0e-08 63.5 186 32.8
Thecc.01G209600 Theobroma cacao HOM05D000333 ORTHO05D000190 3.0e-08 63.5 50 62.0
Lalb_Chr16g0385421 Lupinus albus HOM05D000333 ORTHO05D000190 4.0e-08 63.2 135 36.3
Lalb_Chr22g0357931 Lupinus albus HOM05D010505 ORTHO05D000190 5.2e-08 62.8 221 30.3
FAN09G3007 Fragaria x ananassa HOM05D000333 ORTHO05D000190 1.2e-07 61.6 149 36.2
Potri.003G192000 Populus trichocarpa HOM05D000333 ORTHO05D000190 1.2e-07 61.6 195 31.8
Duzib187G0847 Durio zibethinus HOM05D000333 ORTHO05D000190 1.5e-07 61.2 148 35.1
FAN02G4128 Fragaria x ananassa HOM05D000333 ORTHO05D000190 1.5e-07 61.2 149 36.2
Lj1g0014985 Lotus japonicus HOM05D000333 ORTHO05D000190 1.5e-07 61.2 68 50.0
Aa31LG5G11530 Aethionema arabicum HOM05D000333 ORTHO05D000190 2.0e-07 60.8 149 32.9
QL07p002376 Quercus lobata HOM05D000333 ORTHO05D000190 2.0e-07 60.8 233 30.5
COL.COLO4_18932 Corchorus olitorius HOM05D000333 ORTHO05D000190 2.6e-07 60.5 140 37.1
FAN05G2386 Fragaria x ananassa HOM05D000333 ORTHO05D000190 2.6e-07 60.5 137 38.0
Manes.08G161500 Manihot esculenta HOM05D000333 ORTHO05D000190 3.4e-07 60.1 223 30.0
Psat0s4247g0040 Pisum sativum HOM05D010505 ORTHO05D014594 3.4e-07 60.1 163 33.7
Cpa.g.sc48.112 Carica papaya HOM05D000333 ORTHO05D000190 4.4e-07 59.7 236 30.1
Medtr2g067740 Medicago truncatula HOM05D000333 ORTHO05D000190 4.4e-07 59.7 210 28.6
Actinidia01691 Actinidia chinensis HOM05D000333 ORTHO05D000190 5.7e-07 59.3 134 36.6
CiPaw.08G007300 Carya illinoinensis HOM05D000333 ORTHO05D000190 5.7e-07 59.3 119 37.0
ClCG07G012130 Citrullus lanatus HOM05D000333 ORTHO05D000190 5.7e-07 59.3 157 32.5
FvH4_6g28840 Fragaria vesca HOM05D000333 ORTHO05D000190 5.7e-07 59.3 151 35.8
FAN14G2736 Fragaria x ananassa HOM05D000333 ORTHO05D000190 5.7e-07 59.3 151 35.8
Sabra03G0132100 Salix brachista HOM05D000333 ORTHO05D000190 5.7e-07 59.3 190 31.6
Duzib150G0172 Durio zibethinus HOM05D000333 ORTHO05D000190 7.5e-07 58.9 194 30.9
Gohir.A07G031200 Gossypium hirsutum HOM05D000333 ORTHO05D000190 7.5e-07 58.9 153 33.3
Aqoxy6G00447 Aquilegia oxysepala HOM05D000333 ORTHO05D000190 9.8e-07 58.5 211 29.9
Cfa019953 Carpinus fangiana HOM05D000333 ORTHO05D000190 9.8e-07 58.5 110 38.2
A03p00070 Brassica napus HOM05D000333 ORTHO05D000190 1.3e-06 58.2 78 41.0
C03p00210 Brassica napus HOM05D000333 ORTHO05D000190 1.3e-06 58.2 78 41.0
BraA03t09396Z Brassica rapa HOM05D000333 ORTHO05D000190 1.3e-06 58.2 78 41.0
Eucgr.F03951 Eucalyptus grandis HOM05D000333 ORTHO05D000190 1.3e-06 58.2 86 43.0
Oeu029866.1 Olea europaea HOM05D000333 ORTHO05D000190 1.7e-06 57.8 139 36.7
PSO135G0943 Papaver somniferum HOM05D000333 ORTHO05D000190 1.7e-06 57.8 145 33.1
TPR.G37695 Trifolium pratense HOM05D000333 ORTHO05D000190 1.7e-06 57.8 76 44.7
Psat5g224200 Pisum sativum HOM05D000333 ORTHO05D000190 2.2e-06 57.4 89 36.0
AUR62031681 Chenopodium quinoa HOM05D000333 ORTHO05D000190 2.9e-06 57.0 123 34.1
Ciclev10026234m.g Citrus clementina HOM05D000333 ORTHO05D000190 2.9e-06 57.0 188 29.8
PSO063G0247 Papaver somniferum HOM05D000333 ORTHO05D000190 2.9e-06 57.0 172 31.4
Sabra18G0105700 Salix brachista HOM05D000333 ORTHO05D000190 2.9e-06 57.0 279 26.5
Sed0022974 Sechium edule HOM05D000333 ORTHO05D000190 2.9e-06 57.0 100 36.0
Thecc.10G138600 Theobroma cacao HOM05D000333 ORTHO05D000190 2.9e-06 57.0 144 32.6
TWI63G0744 Tripterygium wilfordii HOM05D000333 ORTHO05D000190 2.9e-06 57.0 113 34.5
AL6G10170 Arabidopsis lyrata HOM05D000333 ORTHO05D000190 3.7e-06 56.6 85 43.5
BcaB01g06121 Brassica carinata HOM05D000333 ORTHO05D000190 3.7e-06 56.6 78 39.7
BcaB01g06122 Brassica carinata HOM05D000333 ORTHO05D000190 3.7e-06 56.6 78 39.7
BolC3t12590H Brassica oleracea HOM05D000333 ORTHO05D000190 3.7e-06 56.6 78 39.7
Gorai.001G036700 Gossypium raimondii HOM05D000333 ORTHO05D000190 3.7e-06 56.6 182 31.9
Manes.08G041900 Manihot esculenta HOM05D003047 ORTHO05D000627 3.7e-06 56.6 147 36.1
Oeu050397.1 Olea europaea HOM05D000333 ORTHO05D000190 3.7e-06 56.6 206 28.2
Psat5g297840 Pisum sativum HOM05D000333 ORTHO05D000190 3.7e-06 56.6 114 32.5
Potri.016G028100 Populus trichocarpa HOM05D000333 ORTHO05D000190 3.7e-06 56.6 141 35.5
Rhsim02G0207600 Rhododendron simsii HOM05D000333 ORTHO05D000190 3.7e-06 56.6 152 35.5
MELO3C017834.2 Cucumis melo HOM05D000333 ORTHO05D000190 4.9e-06 56.2 149 31.5
Gohir.D07G035000 Gossypium hirsutum HOM05D000333 ORTHO05D000190 4.9e-06 56.2 182 31.9
Lj3g0021707 Lotus japonicus HOM05D000333 ORTHO05D000190 4.9e-06 56.2 145 31.7
Psat5g202560 Pisum sativum HOM05D000333 ORTHO05D000190 4.9e-06 56.2 194 30.4
Sed0003528 Sechium edule HOM05D000333 ORTHO05D000190 4.9e-06 56.2 63 39.7
THA.LOC109117277 Tarenaya hassleriana HOM05D000333 ORTHO05D000627 4.9e-06 56.2 60 50.0
C03p08270 Brassica napus HOM05D000333 ORTHO05D000190 6.4e-06 55.8 90 33.3
DCAR_019771 Daucus carota HOM05D000333 ORTHO05D000190 6.4e-06 55.8 166 30.7
Duzib168G1567 Durio zibethinus HOM05D000333 ORTHO05D000190 6.4e-06 55.8 139 33.8
Glyma.04G062600 Glycine max HOM05D000333 ORTHO05D000190 6.4e-06 55.8 128 34.4
Lalb_Chr05g0220161 Lupinus albus HOM05D000333 ORTHO05D000190 6.4e-06 55.8 35 65.7
Oeu004188.1 Olea europaea HOM05D000333 ORTHO05D000190 6.4e-06 55.8 74 40.5
Psat5g214360 Pisum sativum HOM05D000333 ORTHO05D000190 6.4e-06 55.8 75 38.7
Sabra01G0032800 Salix brachista HOM05D000333 ORTHO05D000190 6.4e-06 55.8 156 33.3
SalBow6G1116 Salvia bowleyana HOM05D023726 ORTHO05D012796 6.4e-06 55.8 121 40.5
TWI60G1114 Tripterygium wilfordii HOM05D000174 ORTHO05D001406 6.4e-06 55.8 109 36.7
CiPaw.14G010900 Carya illinoinensis HOM05D000333 ORTHO05D000190 8.3e-06 55.5 153 33.3
AUR62002206 Chenopodium quinoa HOM05D000333 ORTHO05D044048 8.3e-06 55.5 94 41.5
Gohir.D05G121100 Gossypium hirsutum HOM05D000333 ORTHO05D000190 8.3e-06 55.5 114 34.2
Lalb_Chr11g0067781 Lupinus albus HOM05D000333 ORTHO05D000190 8.3e-06 55.5 151 33.1
Manes.11G008900 Manihot esculenta HOM05D000333 ORTHO05D000190 8.3e-06 55.5 208 28.8
Medtr3g011990 Medicago truncatula HOM05D000333 ORTHO05D000190 8.3e-06 55.5 213 27.7
Medtr3g012010 Medicago truncatula HOM05D000333 ORTHO05D000190 8.3e-06 55.5 68 47.1
Medtr7g022980 Medicago truncatula HOM05D000333 ORTHO05D000190 8.3e-06 55.5 184 31.0
Medtr8g466760 Medicago truncatula HOM05D000333 ORTHO05D000190 8.3e-06 55.5 42 57.1
PSO832G4387 Papaver somniferum HOM05D000333 ORTHO05D000190 8.3e-06 55.5 180 31.1
Potri.003G180600 Populus trichocarpa HOM05D000333 ORTHO05D000190 8.3e-06 55.5 225 31.1
Potri.006G063800 Populus trichocarpa HOM05D000333 ORTHO05D000190 8.3e-06 55.5 262 28.2
QL07p013417 Quercus lobata HOM05D000333 ORTHO05D000190 8.3e-06 55.5 43 60.5
Thecc.06G039100 Theobroma cacao HOM05D000333 ORTHO05D000190 8.3e-06 55.5 128 34.4


User provided reference genes

Program Settings