Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 1.4e-102 376.3 194 100.0
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 2.4e-78 295.8 197 80.2
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.1e-72 276.9 187 79.7
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 2.0e-69 266.2 184 75.0
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 3.8e-68 261.9 195 72.8
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 3.2e-67 258.8 203 70.0
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.8e-65 253.1 201 70.1
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 6.8e-65 251.1 198 70.2
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 7.5e-64 247.7 185 71.9
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.4e-62 243.4 174 74.1
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 7.0e-62 241.1 156 75.6
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 9.1e-62 240.7 183 67.8
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 1.2e-61 240.4 158 76.6
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.6e-61 240.0 164 75.0
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 2.0e-61 239.6 154 81.2
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.0e-61 239.6 191 65.4
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 2.7e-61 239.2 154 78.6
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 5.9e-61 238.0 154 75.3
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 7.7e-61 237.7 158 75.3
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 1.3e-60 236.9 161 71.4
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 3.8e-60 235.3 156 78.2
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 6.5e-60 234.6 158 75.3
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 8.5e-60 234.2 190 68.4
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 1.1e-59 233.8 146 80.1
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.5e-59 233.4 189 67.7
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.5e-59 233.4 156 74.4
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.5e-59 233.4 148 77.0
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 4.2e-59 231.9 197 67.0
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 5.5e-59 231.5 150 76.0
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 7.2e-59 231.1 194 64.9
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 9.4e-59 230.7 159 76.1
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.6e-58 229.9 156 74.4
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 2.1e-58 229.6 146 78.8
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.7e-58 229.2 146 78.8
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 3.6e-58 228.8 149 75.8
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 4.7e-58 228.4 183 66.7
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 4.7e-58 228.4 190 65.3
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 8.0e-58 227.6 154 75.3
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 8.0e-58 227.6 146 78.1
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.0e-57 227.3 140 80.0
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 4.0e-57 225.3 199 60.8
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 5.2e-57 224.9 148 75.0
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 6.8e-57 224.6 152 73.0
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 6.8e-57 224.6 153 73.2
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 6.8e-57 224.6 164 70.7
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 6.8e-57 224.6 184 66.3
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 8.8e-57 224.2 145 76.6
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.5e-56 223.4 146 78.1
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.5e-56 223.4 147 79.6
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 2.6e-56 222.6 162 72.8
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 2.6e-56 222.6 150 75.3
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.6e-56 222.6 194 61.9
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 3.4e-56 222.2 150 76.0
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 4.4e-56 221.9 146 75.3
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 5.7e-56 221.5 140 79.3
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 7.5e-56 221.1 154 72.1
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 2.2e-55 219.5 186 64.0
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 2.8e-55 219.2 154 70.1
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.7e-55 218.8 159 71.7
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 3.7e-55 218.8 140 78.6
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.9e-55 218.4 159 71.7
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 8.3e-55 217.6 154 71.4
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 1.4e-54 216.9 188 61.7
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 1.8e-54 216.5 189 60.8
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.4e-54 216.1 186 61.8
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 4.1e-54 215.3 179 63.7
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 5.4e-54 214.9 193 59.1
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 5.4e-54 214.9 138 77.5
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 9.2e-54 214.2 188 61.2
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 9.2e-54 214.2 137 77.4
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 2.0e-53 213.0 189 60.3
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 2.0e-53 213.0 189 60.3
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 2.7e-53 212.6 178 67.4
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 3.5e-53 212.2 194 60.3
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 3.5e-53 212.2 142 71.8
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.5e-53 211.8 148 75.7
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 5.9e-53 211.5 133 78.2
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 1.7e-52 209.9 127 82.7
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 2.9e-52 209.1 133 78.2
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 3.8e-52 208.8 132 77.3
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 2.5e-51 206.1 130 80.0
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 7.3e-51 204.5 152 70.4
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 9.5e-51 204.1 141 72.3
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 9.5e-51 204.1 196 59.7
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 4.7e-50 201.8 131 76.3
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 2.9e-47 192.6 131 71.0
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 5.4e-46 188.3 125 74.4
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 1.8e-41 173.3 141 66.7
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 2.0e-40 169.9 121 70.2
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 2.0e-40 169.9 102 84.3
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 2.6e-40 169.5 104 82.7
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 6.4e-39 164.9 96 87.5
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 6.4e-39 164.9 150 60.7
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 6.4e-39 164.9 143 63.6
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.2e-38 162.5 106 79.2
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 4.1e-38 162.2 121 70.2
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 7.0e-38 161.4 102 80.4
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.0e-37 159.8 168 53.0
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 8.1e-34 147.9 99 76.8
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.4e-33 147.1 101 73.3
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 2.9e-31 139.4 126 54.8
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.4e-30 137.1 102 67.6
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 7.1e-30 134.8 149 51.0
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 2.1e-29 133.3 147 51.7
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 3.0e-28 129.4 136 52.2
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.9e-27 126.7 79 79.7
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 4.7e-26 122.1 71 90.1
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 4.7e-26 122.1 71 90.1
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.3e-23 114.0 96 61.5
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.6e-21 107.1 70 72.9
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.9e-20 102.4 137 47.4
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 6.6e-20 101.7 64 78.1
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.8e-18 96.3 66 68.2
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 3.4e-16 89.4 109 39.4
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 3.1e-09 66.2 39 79.5
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 3.1e-09 66.2 39 79.5


User provided reference genes

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