Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23320 Trifolium pratense HOM05D003309 ORTHO05D003810 3.3e-36 154.5 75 100.0
TPR.G40341 Trifolium pratense HOM05D003309 ORTHO05D003810 3.3e-36 154.5 75 100.0
Psat3g031960 Pisum sativum HOM05D003309 ORTHO05D003810 1.8e-34 148.7 75 94.7
Ca_09017_v3 Cicer arietinum L. HOM05D003309 ORTHO05D003810 8.5e-32 139.8 74 91.9
Lj1g0022515 Lotus japonicus HOM05D003309 ORTHO05D003810 1.4e-31 139.0 76 89.5
Lalb_Chr01g0018091 Lupinus albus HOM05D003309 ORTHO05D003810 7.9e-30 133.3 77 81.8
arahy.Tifrunner.gnm1.ann1.Q0CWXY Arachis hypogaea HOM05D003309 ORTHO05D003810 1.1e-28 129.4 77 83.1
Psat6g079760 Pisum sativum HOM05D003309 ORTHO05D003810 4.8e-27 124.0 73 83.6
TPR.G882 Trifolium pratense HOM05D003309 ORTHO05D003810 3.1e-26 121.3 76 77.6
Glyma.10G074700 Glycine max HOM05D003309 ORTHO05D003810 1.5e-25 119.0 76 77.6
VMungo0720G0194 Vigna mungo HOM05D003309 ORTHO05D003810 2.6e-25 118.2 75 77.3
arahy.Tifrunner.gnm1.ann1.33QXTL Arachis hypogaea HOM05D003309 ORTHO05D003810 7.7e-25 116.7 70 84.3
Ca_08899_v3 Cicer arietinum L. HOM05D003309 ORTHO05D003810 1.0e-24 116.3 76 75.0
Glyma.02G202000 Glycine max HOM05D003309 ORTHO05D003810 2.2e-24 115.2 76 75.0
CiPaw.09G015900 Carya illinoinensis HOM05D003309 ORTHO05D003810 5.0e-24 114.0 77 71.4
Phvul.007G226800 Phaseolus vulgaris HOM05D003309 ORTHO05D003810 5.0e-24 114.0 75 73.3
Cfa016629 Carpinus fangiana HOM05D003309 ORTHO05D003810 6.5e-24 113.6 73 75.3
CSS0018589 Camellia sinensis var. sinensis HOM05D003309 ORTHO05D003810 1.4e-23 112.5 77 71.4
Prupe.7G103700 Prunus persica HOM05D003309 ORTHO05D003810 3.2e-23 111.3 76 69.7
vmacro07420 Vaccinium macrocarpon HOM05D003309 ORTHO05D003810 3.2e-23 111.3 77 70.1
Duzib093G1779 Durio zibethinus HOM05D003309 ORTHO05D003810 5.5e-23 110.5 76 69.7
Actinidia05415 Actinidia chinensis HOM05D003309 ORTHO05D003810 7.2e-23 110.2 77 70.1
Ah.15g090710 Amaranthus hybridus HOM05D003309 ORTHO05D003810 9.4e-23 109.8 73 71.2
Oeu047853.1 Olea europaea HOM05D003309 ORTHO05D003810 1.2e-22 109.4 72 72.2
Duzib128G0984 Durio zibethinus HOM05D003309 ORTHO05D003810 1.6e-22 109.0 76 68.4
Peaxi162Scf00166g01214 Petunia axillaris HOM05D003309 ORTHO05D003810 1.6e-22 109.0 72 70.8
MD12G1027900 Malus domestica HOM05D003309 ORTHO05D003810 2.1e-22 108.6 70 71.4
Peaxi162Scf00166g01215 Petunia axillaris HOM05D003309 ORTHO05D003810 2.1e-22 108.6 77 67.5
Potri.016G078000 Populus trichocarpa HOM05D003309 ORTHO05D003810 2.1e-22 108.6 73 71.2
Solyc09g009990.4 Solanum lycopersicum HOM05D003309 ORTHO05D003810 2.1e-22 108.6 77 64.9
Sopen09g004740 Solanum pennellii HOM05D003309 ORTHO05D003810 2.1e-22 108.6 77 64.9
Prupe.7G103800 Prunus persica HOM05D003309 ORTHO05D003810 3.6e-22 107.8 74 67.6
Atru.chr8.1472 Acer truncatum HOM05D003309 ORTHO05D003810 4.7e-22 107.5 79 67.1
AUR62006202 Chenopodium quinoa HOM05D003309 ORTHO05D003810 4.7e-22 107.5 76 68.4
AUR62037016 Chenopodium quinoa HOM05D003309 ORTHO05D003810 4.7e-22 107.5 76 68.4
CAN.G397.69 Capsicum annuum HOM05D003309 ORTHO05D003810 6.1e-22 107.1 72 69.4
Cc06_g06030 Coffea canephora HOM05D003309 ORTHO05D003810 6.1e-22 107.1 77 63.6
Duzib106G1624 Durio zibethinus HOM05D003309 ORTHO05D003810 6.1e-22 107.1 76 67.1
GSVIVG01033869001 Vitis vinifera HOM05D003309 ORTHO05D003810 6.1e-22 107.1 77 63.6
CAN.G334.11 Capsicum annuum HOM05D003309 ORTHO05D003810 8.0e-22 106.7 72 69.4
CiPaw.10G010700 Carya illinoinensis HOM05D003309 ORTHO05D003810 1.0e-21 106.3 77 64.9
Gohir.D09G134300 Gossypium hirsutum HOM05D003309 ORTHO05D003810 1.4e-21 105.9 76 65.8
Gorai.006G154100 Gossypium raimondii HOM05D003309 ORTHO05D003810 1.4e-21 105.9 76 65.8
SalBow5G0001 Salvia bowleyana HOM05D003309 ORTHO05D003810 1.4e-21 105.9 72 70.8
Nitab4.5_0000692g0220 Nicotiana tabacum HOM05D003309 ORTHO05D003810 1.8e-21 105.5 72 68.1
Prupe.7G103900 Prunus persica HOM05D003309 ORTHO05D003810 1.8e-21 105.5 77 64.9
PGSC0003DMG400008869 Solanum tuberosum HOM05D003309 ORTHO05D003810 1.8e-21 105.5 72 66.7
DCAR_013404 Daucus carota HOM05D003309 ORTHO05D003810 2.3e-21 105.1 72 68.1
Oeu056872.1 Olea europaea HOM05D003309 ORTHO05D003810 2.3e-21 105.1 77 62.3
Potri.006G210900 Populus trichocarpa HOM05D003309 ORTHO05D003810 2.3e-21 105.1 77 64.9
FAN05G4850 Fragaria x ananassa HOM05D003309 ORTHO05D003810 3.0e-21 104.8 77 64.9
Manes.08G027000 Manihot esculenta HOM05D003309 ORTHO05D003810 3.0e-21 104.8 77 62.3
RcHm_v2.0_Chr3g0474311 Rosa chinensis HOM05D003309 ORTHO05D003810 3.0e-21 104.8 77 64.9
EL10Ac7g16898 Beta vulgaris HOM05D003309 ORTHO05D003810 3.9e-21 104.4 76 64.5
CSS0011107 Camellia sinensis var. sinensis HOM05D003309 ORTHO05D003810 3.9e-21 104.4 76 67.1
CSS0033394 Camellia sinensis var. sinensis HOM05D003309 ORTHO05D003810 3.9e-21 104.4 76 67.1
FvH4_6g19190 Fragaria vesca HOM05D003309 ORTHO05D003810 5.2e-21 104.0 77 64.9
FAN14G0655 Fragaria x ananassa HOM05D003309 ORTHO05D003810 5.2e-21 104.0 77 64.9
Lj2C139T14 Lonicera japonica HOM05D003309 ORTHO05D003810 5.2e-21 104.0 76 64.5
Sabra06G0162400 Salix brachista HOM05D003309 ORTHO05D003810 5.2e-21 104.0 77 62.3
Lj2A140T57 Lonicera japonica HOM05D003309 ORTHO05D003810 6.7e-21 103.6 77 64.9
Potri.006G210800 Populus trichocarpa HOM05D003309 ORTHO05D003810 6.7e-21 103.6 75 66.7
Rhsim03G0073900 Rhododendron simsii HOM05D003309 ORTHO05D003810 6.7e-21 103.6 76 65.8
Sed0024944 Sechium edule HOM05D003309 ORTHO05D003810 8.8e-21 103.2 77 62.3
MSTRG.26632 Avicennia marina HOM05D003309 ORTHO05D003810 1.1e-20 102.8 77 63.6
Cc06_g06050 Coffea canephora HOM05D003309 ORTHO05D003810 1.1e-20 102.8 77 62.3
Eucgr.A02649 Eucalyptus grandis HOM05D003309 ORTHO05D003810 1.1e-20 102.8 77 64.9
FAN02G1791 Fragaria x ananassa HOM05D003309 ORTHO05D003810 1.1e-20 102.8 77 63.6
HanXRQChr13g0388791 Helianthus annuus HOM05D003309 ORTHO05D003810 1.1e-20 102.8 77 58.4
TAR633G2357 Trochodendron aralioides HOM05D003309 ORTHO05D003810 1.1e-20 102.8 77 63.6
Ciclev10011692m.g Citrus clementina HOM05D003309 ORTHO05D003810 1.5e-20 102.4 77 67.5
Gohir.A09G140200 Gossypium hirsutum HOM05D003309 ORTHO05D003810 1.5e-20 102.4 76 63.2
Oeu047852.1 Olea europaea HOM05D003309 ORTHO05D003810 1.5e-20 102.4 77 66.2
PGR004G0572 Punica granatum HOM05D003309 ORTHO05D003810 2.0e-20 102.1 77 59.7
Sc02g0000360 Simmondsia chinensis HOM05D003309 ORTHO05D003810 2.0e-20 102.1 73 67.1
Thecc.05G092000 Theobroma cacao HOM05D003309 ORTHO05D003810 2.0e-20 102.1 76 67.1
Atru.chr8.1473 Acer truncatum HOM05D003309 ORTHO05D003810 2.6e-20 101.7 77 59.7
Cfa016628 Carpinus fangiana HOM05D003309 ORTHO05D003810 2.6e-20 101.7 70 74.3
Nn6g34852 Nelumbo nucifera HOM05D003309 ORTHO05D003810 2.6e-20 101.7 77 64.9
Sabra16G0082500 Salix brachista HOM05D003309 ORTHO05D003810 2.6e-20 101.7 77 63.6
CANSAT64G2227 Cannabis sativa HOM05D003309 ORTHO05D003810 3.3e-20 101.3 77 63.6
CiPaw.09G015800 Carya illinoinensis HOM05D003309 ORTHO05D003810 3.3e-20 101.3 77 61.0
Ciclev10011628m.g Citrus clementina HOM05D003309 ORTHO05D003810 3.3e-20 101.3 77 61.0
Dinv21187 Davidia involucrata HOM05D003309 ORTHO05D003810 3.3e-20 101.3 77 63.6
MD12G1027700 Malus domestica HOM05D003309 ORTHO05D003810 3.3e-20 101.3 78 62.8
FAN09G2352 Fragaria x ananassa HOM05D003309 ORTHO05D003810 4.4e-20 100.9 77 62.3
FAN09G2679 Fragaria x ananassa HOM05D003309 ORTHO05D003810 4.4e-20 100.9 77 62.3
Lsat_1_v5_gn_5_165181 Lactuca sativa HOM05D003309 ORTHO05D003810 4.4e-20 100.9 76 60.5
Thecc.05G091900 Theobroma cacao HOM05D003309 ORTHO05D003810 5.7e-20 100.5 77 59.7
MSTRG.26631 Avicennia marina HOM05D003309 ORTHO05D003810 9.7e-20 99.8 77 63.6
Hund19910 Selenicereus undatus HOM05D003309 ORTHO05D003810 9.7e-20 99.8 76 63.2
TWI53G0128 Tripterygium wilfordii HOM05D003309 ORTHO05D003810 9.7e-20 99.8 73 67.1
TWI53G1850 Tripterygium wilfordii HOM05D003309 ORTHO05D003810 1.3e-19 99.4 76 59.2
MSTRG.10376 Avicennia marina HOM05D003309 ORTHO05D003810 1.7e-19 99.0 73 65.8
Haze_19632 Corylus avellana HOM05D003309 ORTHO05D003810 1.7e-19 99.0 77 61.0
GSVIVG01033870001 Vitis vinifera HOM05D003309 ORTHO05D003810 1.7e-19 99.0 77 66.2
Migut.L01793 Erythranthe guttata HOM05D003309 ORTHO05D003810 2.2e-19 98.6 77 61.0
Psat6g079680 Pisum sativum HOM05D003309 ORTHO05D003810 2.2e-19 98.6 77 62.3
TPR.G14767 Trifolium pratense HOM05D003309 ORTHO05D003810 2.2e-19 98.6 77 63.6
ECA246G1476 Erigeron canadensis HOM05D003309 ORTHO05D003810 2.8e-19 98.2 75 62.7
Cfa016627 Carpinus fangiana HOM05D003309 ORTHO05D003810 3.7e-19 97.8 77 59.7
COL.COLO4_29697 Corchorus olitorius HOM05D003309 ORTHO05D003810 3.7e-19 97.8 77 59.7
CsaV3_3G037410 Cucumis sativus L. HOM05D003309 ORTHO05D003810 3.7e-19 97.8 76 60.5
Duzib106G1259 Durio zibethinus HOM05D003309 ORTHO05D003810 3.7e-19 97.8 77 58.4
SGA_v2.0_scaffold184G39973 Striga asiatica HOM05D003309 ORTHO05D003810 3.7e-19 97.8 76 59.2
Carub.0005s1903 Capsella rubella HOM05D003309 ORTHO05D003810 4.8e-19 97.4 76 59.2
Ca_00893_v3 Cicer arietinum L. HOM05D003309 ORTHO05D003810 4.8e-19 97.4 77 64.9
ClCG10G018830 Citrullus lanatus HOM05D003309 ORTHO05D003810 4.8e-19 97.4 75 60.0
Sp5g09680 Schrenkiella parvula HOM05D003309 ORTHO05D003810 4.8e-19 97.4 73 63.0
ClCG10G018820 Citrullus lanatus HOM05D003309 ORTHO05D003810 6.3e-19 97.1 76 57.9
MELO3C009484.2 Cucumis melo HOM05D003309 ORTHO05D003810 6.3e-19 97.1 75 60.0
Migut.L01795 Erythranthe guttata HOM05D003309 ORTHO05D003810 8.2e-19 96.7 77 59.7
Gohir.D04G098600 Gossypium hirsutum HOM05D003309 ORTHO05D003810 8.2e-19 96.7 73 61.6
Gohir.D09G134400 Gossypium hirsutum HOM05D003309 ORTHO05D003810 8.2e-19 96.7 77 58.4
Gorai.006G154200 Gossypium raimondii HOM05D003309 ORTHO05D003810 8.2e-19 96.7 77 58.4
Gorai.009G400800 Gossypium raimondii HOM05D003309 ORTHO05D003810 8.2e-19 96.7 73 61.6
Medtr1g059760 Medicago truncatula HOM05D003309 ORTHO05D003810 8.2e-19 96.7 77 62.3
BcaB01g00353 Brassica carinata HOM05D003309 ORTHO05D003810 1.1e-18 96.3 76 59.2
MELO3C009485.2 Cucumis melo HOM05D003309 ORTHO05D003810 1.1e-18 96.3 76 59.2
Duzib093G0087 Durio zibethinus HOM05D003309 ORTHO05D003810 1.1e-18 96.3 77 57.1
SalBow3G0879 Salvia bowleyana HOM05D003309 ORTHO05D003810 1.1e-18 96.3 77 61.0
QL07p038577 Quercus lobata HOM05D003309 ORTHO05D003810 1.4e-18 95.9 71 64.8
A09p45700 Brassica napus HOM05D003309 ORTHO05D003810 1.8e-18 95.5 73 60.3
C08p27900 Brassica napus HOM05D003309 ORTHO05D003810 1.8e-18 95.5 73 60.3
BolC8t50405H Brassica oleracea HOM05D003309 ORTHO05D003810 1.8e-18 95.5 73 60.3
BraA09t40031Z Brassica rapa HOM05D003309 ORTHO05D003810 1.8e-18 95.5 73 60.3
CsaV3_3G037400 Cucumis sativus L. HOM05D003309 ORTHO05D003810 1.8e-18 95.5 75 58.7
ECA248G0622 Erigeron canadensis HOM05D003309 ORTHO05D003810 1.8e-18 95.5 73 58.9
Glyma.02G202100 Glycine max HOM05D003309 ORTHO05D003810 1.8e-18 95.5 78 61.5
arahy.Tifrunner.gnm1.ann1.F1289G Arachis hypogaea HOM05D003309 ORTHO05D003810 2.4e-18 95.1 77 59.7
arahy.Tifrunner.gnm1.ann1.MYHZ2L Arachis hypogaea HOM05D003309 ORTHO05D003810 2.4e-18 95.1 77 59.7
CAN.G78.106 Capsicum annuum HOM05D003309 ORTHO05D003810 2.4e-18 95.1 71 62.0
Gohir.A09G140100 Gossypium hirsutum HOM05D003309 ORTHO05D003810 2.4e-18 95.1 77 57.1
HanXRQChr01g0010081 Helianthus annuus HOM05D003309 ORTHO05D003810 2.4e-18 95.1 77 57.1
Lsat_1_v5_gn_3_41420 Lactuca sativa HOM05D003309 ORTHO05D003810 2.4e-18 95.1 70 65.7
Sed0025091 Sechium edule HOM05D003309 ORTHO05D003810 2.4e-18 95.1 77 59.7
BcaC07g39630 Brassica carinata HOM05D003309 ORTHO05D003810 3.1e-18 94.7 73 60.3
AT3G52610 Arabidopsis thaliana HOM05D003309 ORTHO05D003810 4.1e-18 94.4 76 57.9
arahy.Tifrunner.gnm1.ann1.3HD1EN Arachis hypogaea HOM05D003309 ORTHO05D003810 4.1e-18 94.4 73 63.0
Lj5g0008872 Lotus japonicus HOM05D003309 ORTHO05D003810 5.3e-18 94.0 77 59.7
Lalb_Chr02g0154851 Lupinus albus HOM05D003309 ORTHO05D003810 5.3e-18 94.0 76 60.5
Os01g0861900 Oryza sativa ssp. japonica HOM05D003309 ORTHO05D003810 5.3e-18 94.0 72 61.1
AL5G33390 Arabidopsis lyrata HOM05D003309 ORTHO05D003810 7.0e-18 93.6 76 56.6
Nn2g14195 Nelumbo nucifera HOM05D003309 ORTHO05D003810 7.0e-18 93.6 73 61.6
Glyma.10G074600 Glycine max HOM05D003309 ORTHO05D003810 9.1e-18 93.2 78 60.3
Lsat_1_v5_gn_3_41461 Lactuca sativa HOM05D003309 ORTHO05D003810 9.1e-18 93.2 72 61.1
HanXRQChr01g0010071 Helianthus annuus HOM05D003309 ORTHO05D003810 1.2e-17 92.8 73 54.8
Cpa.g.sc104.111 Carica papaya HOM05D003309 ORTHO05D003810 1.6e-17 92.4 56 71.4
arahy.Tifrunner.gnm1.ann1.AZ092E Arachis hypogaea HOM05D003309 ORTHO05D003810 2.6e-17 91.7 64 68.8
arahy.Tifrunner.gnm1.ann1.ZQ0IV1 Arachis hypogaea HOM05D003309 ORTHO05D003810 2.6e-17 91.7 64 68.8
Haze_19633 Corylus avellana HOM05D002514 ORTHO05D002761 2.6e-17 91.7 64 65.6
Thhalv10010329m.g Eutrema salsugineum HOM05D003309 ORTHO05D003810 2.6e-17 91.7 73 58.9
SalBow5G0700 Salvia bowleyana HOM05D003309 ORTHO05D003810 2.6e-17 91.7 73 63.0
Cpa.g.sc104.112 Carica papaya HOM05D003309 ORTHO05D003810 3.5e-17 91.3 76 57.9
SGA_v2.0_scaffold13G06704 Striga asiatica HOM05D003309 ORTHO05D003810 3.5e-17 91.3 77 58.4
HanXRQChr09g0260051 Helianthus annuus HOM05D003309 ORTHO05D003810 5.9e-17 90.5 72 58.3
unitig_8.g4040 Utricularia gibba HOM05D003309 ORTHO05D003810 5.9e-17 90.5 77 54.5
Zm00001eb366820 Zea mays HOM05D003309 ORTHO05D003810 5.9e-17 90.5 76 55.3
CARHR162430 Cardamine hirsuta HOM05D003309 ORTHO05D003810 7.7e-17 90.1 73 57.5
Phvul.007G226900 Phaseolus vulgaris HOM05D003309 ORTHO05D003810 7.7e-17 90.1 77 59.7
VMungo0720G2613 Vigna mungo HOM05D003309 ORTHO05D003810 7.7e-17 90.1 76 60.5
PSO801G0276 Papaver somniferum HOM05D003309 ORTHO05D003810 1.0e-16 89.7 77 55.8
CDE08G1063 Ceratophyllum demersum HOM05D003309 ORTHO05D003810 2.2e-16 88.6 76 60.5
HanXRQChr17g0542701 Helianthus annuus HOM05D003309 ORTHO05D003810 2.2e-16 88.6 71 60.6
PSO339G5731 Papaver somniferum HOM05D003309 ORTHO05D003810 2.9e-16 88.2 77 55.8
HPP92_011906 Vanilla planifolia HOM05D003309 ORTHO05D003810 6.5e-16 87.0 70 55.7
Aa31LG10G7680 Aethionema arabicum HOM05D003309 ORTHO05D003810 1.1e-15 86.3 73 56.2
Aqoxy2G01092 Aquilegia oxysepala HOM05D003309 ORTHO05D003810 1.1e-15 86.3 77 55.8
ECA246G4112 Erigeron canadensis HOM05D003309 ORTHO05D003810 1.5e-15 85.9 72 55.6
THA.LOC104799759 Tarenaya hassleriana HOM05D003309 ORTHO05D003810 1.5e-15 85.9 72 58.3
HPP92_013813 Vanilla planifolia HOM05D003309 ORTHO05D003810 2.7e-14 81.6 69 55.1
Gohir.A04G065100 Gossypium hirsutum HOM05D003309 ORTHO05D003810 1.0e-13 79.7 61 59.0
Nn2g14197 Nelumbo nucifera HOM05D003309 ORTHO05D003810 1.0e-13 79.7 71 56.3
SEGI_22453 Sequoiadendron giganteum HOM05D003309 ORTHO05D003810 5.7e-12 73.9 77 48.1
ATR0820G118 Amborella trichopoda HOM05D003309 ORTHO05D003810 7.5e-12 73.6 73 52.1
SMO351G0154 Selaginella moellendorffii HOM05D003309 ORTHO05D003810 6.3e-11 70.5 76 42.1
Pp3c15_17540 Physcomitrium patens HOM05D003309 ORTHO05D003810 2.4e-10 68.6 74 44.6
Mapoly0001s0549 Marchantia polymorpha HOM05D003309 ORTHO05D003810 2.2e-08 62.0 71 43.7
COL.COLO4_29696 Corchorus olitorius HOM05D003309 ORTHO05D003810 2.5e-07 58.5 76 46.1
Pp3c3_18850 Physcomitrium patens HOM05D003309 ORTHO05D003810 2.1e-06 55.5 67 46.3


User provided reference genes

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