Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40235 Trifolium pratense HOM05D002954 ORTHO05D010767 1.2e-115 420.2 275 100.0
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.4e-28 131.0 118 54.2
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 2.0e-25 120.6 350 45.4
Medtr0232s0030 Medicago truncatula HOM05D002954 ORTHO05D010767 6.9e-23 112.1 217 50.7
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 4.2e-20 102.8 126 42.9
Psat6g199080 Pisum sativum HOM05D000107 ORTHO05D000062 1.0e-18 98.2 90 51.1
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 7.0e-15 85.5 105 41.0
Psat6g222120 Pisum sativum HOM05D002954 ORTHO05D010767 1.5e-12 77.8 96 43.8
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 1.2e-11 74.7 96 40.6
Peaxi162Scf01071g00046 Petunia axillaris HOM05D040622 ORTHO05D010308 2.1e-11 73.9 94 36.2
TPR.G20833 Trifolium pratense HOM05D002257 ORTHO05D002417 8.0e-11 72.0 36 94.4
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 1.0e-10 71.6 196 28.6
Psat0s2164g0040 Pisum sativum HOM05D000107 ORTHO05D010767 3.0e-10 70.1 192 29.2
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 6.7e-10 68.9 88 38.6
Psat6g163080 Pisum sativum HOM05D002954 ORTHO05D010767 1.1e-09 68.2 184 57.6
Zm00001eb315670 Zea mays HOM05D008576 ORTHO05D000385 1.5e-09 67.8 128 31.2
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 2.0e-09 67.4 94 38.3
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 2.0e-09 67.4 101 39.6
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 2.6e-09 67.0 129 32.6
Peaxi162Scf02065g00005 Petunia axillaris HOM05D002954 ORTHO05D010308 2.6e-09 67.0 85 35.3
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 3.3e-09 66.6 105 38.1
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.5e-09 65.5 111 38.7
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 1.3e-08 64.7 189 27.0
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 1.3e-08 64.7 189 27.0
Lj1g0024925 Lotus japonicus HOM05D002954 ORTHO05D003353 1.3e-08 64.7 91 40.7
Psat5g112160 Pisum sativum HOM05D002954 ORTHO05D010767 1.3e-08 64.7 89 40.4
Zm00001eb354780 Zea mays HOM05D008576 ORTHO05D000385 1.3e-08 64.7 128 30.5
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.7e-08 64.3 98 33.7
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-08 63.9 71 47.9
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.7e-08 63.2 122 31.1
Zm00001eb086350 Zea mays HOM05D008576 ORTHO05D000385 4.8e-08 62.8 128 29.7
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.3e-08 62.4 111 37.8
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.1e-07 61.6 91 46.2
Peaxi162Scf00168g00125 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-07 61.6 86 37.2
Zm00001eb133410 Zea mays HOM05D002305 ORTHO05D002528 1.1e-07 61.6 120 31.7
Peaxi162Scf00024g00071 Petunia axillaris HOM05D002954 ORTHO05D003353 1.8e-07 60.8 64 45.3
Peaxi162Scf00417g00048 Petunia axillaris HOM05D002954 ORTHO05D003353 1.8e-07 60.8 119 30.3
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 2.4e-07 60.5 94 39.4
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 2.4e-07 60.5 90 35.6
arahy.Tifrunner.gnm1.ann1.Q8JFIC Arachis hypogaea HOM05D011000 ORTHO05D003353 4.1e-07 59.7 92 39.1
Lj2g0015436 Lotus japonicus HOM05D002954 ORTHO05D010308 4.1e-07 59.7 113 30.1
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.1e-07 59.7 74 43.2
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 4.1e-07 59.7 76 43.4
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 5.3e-07 59.3 71 42.3
TWI60G1041 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.6e-06 57.8 100 35.0
Zm00001eb029790 Zea mays HOM05D008576 ORTHO05D000385 2.0e-06 57.4 96 32.3
arahy.Tifrunner.gnm1.ann1.31P5C8 Arachis hypogaea HOM05D011000 ORTHO05D003353 2.7e-06 57.0 92 38.0
arahy.Tifrunner.gnm1.ann1.LZRM5J Arachis hypogaea HOM05D011000 ORTHO05D000385 3.5e-06 56.6 108 32.4
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 3.5e-06 56.6 209 26.3
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 4.5e-06 56.2 96 30.2
Peaxi162Scf00168g00136 Petunia axillaris HOM05D002954 ORTHO05D003353 4.5e-06 56.2 81 37.0
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 4.5e-06 56.2 96 30.2
arahy.Tifrunner.gnm1.ann1.I134XL Arachis hypogaea HOM05D011000 ORTHO05D003353 5.9e-06 55.8 108 31.5
Ca_08360_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.9e-06 55.8 99 40.4
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 5.9e-06 55.8 88 35.2
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 5.9e-06 55.8 96 29.2
TPR.G18316 Trifolium pratense HOM05D002954 ORTHO05D003353 5.9e-06 55.8 63 41.3
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 5.9e-06 55.8 79 34.2
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.7e-06 55.5 92 32.6


User provided reference genes

Program Settings