Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 3.6e-183 644.8 331 100.0
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 9.8e-181 636.7 331 98.5
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.4e-179 632.9 331 97.6
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 8.0e-175 617.1 327 96.6
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 5.7e-173 610.9 331 94.0
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 1.3e-169 599.7 331 92.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 2.3e-169 599.0 327 93.0
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 2.9e-169 598.6 331 92.4
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 3.8e-169 598.2 331 92.1
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.1e-168 596.7 329 92.4
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 3.3e-168 595.1 331 91.8
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 3.6e-167 591.7 337 91.1
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 4.7e-167 591.3 331 91.2
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 4.7e-167 591.3 331 91.2
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.3e-164 583.2 330 90.0
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 4.9e-164 581.3 328 89.6
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.8e-163 579.3 328 89.3
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 4.1e-163 578.2 327 90.5
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 5.4e-163 577.8 332 89.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 9.2e-163 577.0 328 89.0
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.2e-162 576.6 329 89.1
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.0e-162 575.9 328 88.7
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 2.0e-162 575.9 332 88.9
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 3.5e-162 575.1 332 88.6
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 7.8e-162 573.9 324 90.7
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.1e-160 570.1 330 87.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.1e-160 570.1 330 88.5
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.9e-160 569.3 332 87.7
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.9e-160 569.3 328 88.4
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 3.3e-160 568.5 327 88.7
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 5.6e-160 567.8 332 87.3
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.3e-160 567.4 324 90.4
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.3e-160 567.4 324 90.4
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.6e-159 565.1 330 87.9
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.0e-158 563.5 324 89.2
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.0e-158 563.5 332 87.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.3e-158 562.4 332 86.7
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.1e-158 562.0 330 87.6
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 4.0e-158 561.6 327 87.5
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-157 560.1 332 86.4
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.4e-157 558.1 332 85.8
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 4.4e-157 558.1 332 84.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 5.8e-157 557.8 327 86.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 7.5e-157 557.4 332 84.3
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.3e-156 556.6 332 84.9
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.7e-156 556.2 330 86.1
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.7e-156 556.2 330 86.1
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.2e-156 555.8 327 86.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.9e-156 555.4 332 86.1
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.9e-156 555.4 331 89.4
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.7e-156 555.1 330 85.8
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 3.7e-156 555.1 332 84.6
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 4.9e-156 554.7 328 85.1
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 4.9e-156 554.7 332 84.6
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.1e-155 553.5 332 84.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 1.4e-155 553.1 333 84.7
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.4e-155 553.1 332 84.3
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.9e-155 552.7 332 83.7
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.2e-155 552.0 332 83.7
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 85.1
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 5.4e-155 551.2 329 85.1
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 5.4e-155 551.2 331 85.5
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 9.2e-155 550.4 326 85.9
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 9.2e-155 550.4 324 86.1
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.2e-154 550.1 331 84.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.6e-154 549.7 329 84.8
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 3.5e-154 548.5 329 84.5
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.6e-154 548.1 333 84.1
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 4.6e-154 548.1 330 84.5
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 4.6e-154 548.1 386 76.4
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.0e-153 547.0 332 83.4
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.3e-153 546.6 327 87.2
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.3e-153 545.8 328 84.1
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 84.2
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 3.9e-153 545.0 328 84.1
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.5e-152 543.1 362 80.4
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 2.5e-152 542.3 359 77.7
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.3e-152 542.0 327 83.8
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 3.3e-152 542.0 328 84.8
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 9.5e-152 540.4 329 83.9
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.2e-151 540.0 331 83.1
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.1e-151 539.3 329 84.2
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.4e-150 536.6 327 83.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 4.4e-149 531.6 331 80.7
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.5e-149 530.8 331 81.9
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 9.8e-149 530.4 329 82.1
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.3e-148 530.0 331 80.4
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.3e-148 530.0 331 81.6
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.7e-148 529.6 331 81.6
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.1e-147 526.9 455 64.4
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.4e-147 526.6 314 85.4
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.1
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.5e-144 515.8 303 86.1
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 3.3e-144 515.4 330 81.2
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 5.6e-144 514.6 324 80.9
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.4e-141 505.0 332 80.7
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.6e-141 504.2 331 79.2
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.2e-138 496.9 328 77.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.6e-135 486.5 329 73.6
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.4e-134 482.6 331 77.3
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 3.4e-133 478.8 329 74.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.7e-132 476.5 377 69.0
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.0e-129 467.2 330 75.5
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.3e-129 466.8 325 71.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 9.0e-126 454.1 234 99.1
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 2.0e-125 453.0 329 73.6
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 5.8e-125 451.4 278 81.7
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.7e-122 442.6 332 72.3
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 7.9e-114 414.5 323 69.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 4.5e-109 398.7 317 62.8
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.0e-108 397.5 325 59.7
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.2e-107 392.5 233 84.1
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 3.5e-106 389.0 330 61.5
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 6.3e-103 378.3 274 71.9
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.0e-100 370.9 321 62.6
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.7e-95 352.4 197 90.9
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.2e-91 338.2 339 60.8
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-89 334.3 335 60.3
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.0e-89 334.3 229 75.5
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.7e-87 327.0 239 66.9
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.2e-87 326.6 220 79.5
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-85 320.9 220 77.7
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 4.7e-82 308.9 220 76.8
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 5.1e-81 305.4 167 90.4
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.6e-74 283.9 339 44.2
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 4.5e-69 265.8 165 83.0
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 5.0e-68 262.3 329 52.3
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.1e-66 256.9 268 56.0
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.1e-66 256.9 165 78.2
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.7e-58 229.9 135 84.4
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.0e-52 211.5 130 83.1
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.6e-42 177.6 162 62.3
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 5.2e-41 172.6 195 49.7
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.4e-40 169.9 103 81.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 2.4e-38 163.7 186 52.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 7.0e-38 162.2 103 80.6
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.0e-36 158.3 87 87.4
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.1e-34 150.6 90 86.7
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 8.9e-33 145.2 92 81.5
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.4e-32 143.3 80 88.8
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 9.8e-32 141.7 88 79.5
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-31 141.0 74 94.6
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 9.2e-30 135.2 69 89.9
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 1.5e-27 127.9 72 84.7
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.2e-26 124.8 77 83.1
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.4e-25 121.3 75 77.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 5.2e-25 119.4 72 84.7
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 8.4e-23 112.1 69 81.2
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.1e-17 95.1 67 74.6
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 6.4e-15 85.9 65 70.8
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.9e-12 76.6 85 55.3
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9


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