Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40170 Trifolium pratense HOM05D007109 ORTHO05D008813 2.1e-61 238.8 119 100.0
TPR.G14571 Trifolium pratense HOM05D007109 ORTHO05D008813 4.3e-46 188.0 108 88.0
Medtr3g028060 Medicago truncatula HOM05D007109 ORTHO05D008813 1.1e-38 163.3 107 77.6
Ca_27474_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 3.3e-30 135.2 112 67.9
Medtr3g034370 Medicago truncatula HOM05D007109 ORTHO05D008813 9.6e-30 133.7 94 74.5
Lalb_Chr25g0282601 Lupinus albus HOM05D007109 ORTHO05D008813 1.5e-27 126.3 113 62.8
Lalb_Chr01g0000491 Lupinus albus HOM05D007109 ORTHO05D008813 2.1e-24 115.9 108 62.0
Glyma.04G142400 Glycine max HOM05D007109 ORTHO05D008813 4.6e-24 114.8 110 61.8
Glyma.11G159021 Glycine max HOM05D007109 ORTHO05D008813 4.6e-24 114.8 111 58.6
Lj3g0020735 Lotus japonicus HOM05D007109 ORTHO05D008813 1.8e-23 112.8 106 59.4
Phvul.005G036000 Phaseolus vulgaris HOM05D007109 ORTHO05D008813 3.0e-23 112.1 95 64.2
Medtr3g034410 Medicago truncatula HOM05D007109 ORTHO05D008813 6.7e-23 110.9 104 60.6
Lj3g0012595 Lotus japonicus HOM05D007109 ORTHO05D008813 5.7e-22 107.8 83 71.1
Ca_26440_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 4.1e-20 101.7 106 53.8
Thecc.01G404600 Theobroma cacao HOM05D007109 ORTHO05D008813 9.0e-20 100.5 89 61.8
arahy.Tifrunner.gnm1.ann1.K9M8RY Arachis hypogaea HOM05D007109 ORTHO05D008813 2.6e-19 99.0 115 49.6
Prupe.2G023200 Prunus persica HOM05D007109 ORTHO05D008813 2.6e-19 99.0 92 59.8
Duzib133G0385 Durio zibethinus HOM05D007109 ORTHO05D008813 4.5e-19 98.2 89 61.8
Duzib138G1369 Durio zibethinus HOM05D007109 ORTHO05D008813 5.9e-19 97.8 89 60.7
Ciclev10032181m.g Citrus clementina HOM05D007109 ORTHO05D008813 1.0e-18 97.1 90 55.6
Medtr0003s0580 Medicago truncatula HOM05D007109 ORTHO05D008813 1.0e-18 97.1 116 47.4
MD07G1022700 Malus domestica HOM05D007109 ORTHO05D008813 2.9e-18 95.5 85 58.8
QL04p010443 Quercus lobata HOM05D007109 ORTHO05D008813 6.5e-18 94.4 85 58.8
RcHm_v2.0_Chr1g0318291 Rosa chinensis HOM05D007109 ORTHO05D008813 8.5e-18 94.0 112 46.4
Atru.chr11.2527 Acer truncatum HOM05D007109 ORTHO05D008813 1.1e-17 93.6 82 52.4
MD02G1301300 Malus domestica HOM05D007109 ORTHO05D008813 1.1e-17 93.6 89 55.1
Dinv07428 Davidia involucrata HOM05D007109 ORTHO05D008813 1.4e-17 93.2 82 57.3
Duzib268G1698 Durio zibethinus HOM05D007109 ORTHO05D008813 2.5e-17 92.4 89 57.3
Gohir.A08G141600 Gossypium hirsutum HOM05D007109 ORTHO05D008813 2.5e-17 92.4 89 58.4
Psat7g150920 Pisum sativum HOM05D007109 ORTHO05D008813 3.2e-17 92.0 118 41.5
Gohir.D08G162700 Gossypium hirsutum HOM05D007109 ORTHO05D008813 5.5e-17 91.3 89 57.3
Gorai.004G169100 Gossypium raimondii HOM05D007109 ORTHO05D008813 5.5e-17 91.3 89 57.3
Manes.10G135500 Manihot esculenta HOM05D007109 ORTHO05D008813 5.5e-17 91.3 110 48.2
COL.COLO4_12331 Corchorus olitorius HOM05D007109 ORTHO05D008813 7.2e-17 90.9 88 56.8
MD07G1022600 Malus domestica HOM05D007109 ORTHO05D008813 9.4e-17 90.5 85 54.1
Hma1.2p1_0269F.1_g107760 Hydrangea macrophylla HOM05D007109 ORTHO05D008813 1.2e-16 90.1 89 52.8
Cfa010821 Carpinus fangiana HOM05D007109 ORTHO05D008813 2.1e-16 89.4 78 59.0
VMungo1080G0219 Vigna mungo HOM05D007109 ORTHO05D008813 2.7e-16 89.0 80 65.0
CiPaw.14G003600 Carya illinoinensis HOM05D007109 ORTHO05D008813 3.6e-16 88.6 106 49.1
Potri.009G055800 Populus trichocarpa HOM05D007109 ORTHO05D008813 4.6e-16 88.2 108 50.9
TWI73G0029 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 4.6e-16 88.2 95 50.5
TAR633G0887 Trochodendron aralioides HOM05D007109 ORTHO05D008813 4.6e-16 88.2 102 50.0
FAN03G1693 Fragaria x ananassa HOM05D007109 ORTHO05D008813 6.1e-16 87.8 116 42.2
CiPaw.13G008200 Carya illinoinensis HOM05D007109 ORTHO05D008813 7.9e-16 87.4 106 49.1
FvH4_7g01730 Fragaria vesca HOM05D007109 ORTHO05D008813 1.0e-15 87.0 116 41.4
FAN06G2427 Fragaria x ananassa HOM05D007109 ORTHO05D008813 1.0e-15 87.0 116 41.4
FAN10G2826 Fragaria x ananassa HOM05D007109 ORTHO05D008813 1.0e-15 87.0 116 41.4
Cc02_g28960 Coffea canephora HOM05D007109 ORTHO05D008813 1.4e-15 86.7 82 54.9
Nitab4.5_0004222g0010 Nicotiana tabacum HOM05D007109 ORTHO05D008813 2.3e-15 85.9 105 44.8
Sabra09G0040900 Salix brachista HOM05D007109 ORTHO05D008813 3.0e-15 85.5 102 52.0
PGSC0003DMG400041994 Solanum tuberosum HOM05D007109 ORTHO05D008813 3.0e-15 85.5 83 48.2
PGSC0003DMG402006771 Solanum tuberosum HOM05D007109 ORTHO05D008813 3.0e-15 85.5 83 48.2
CANSAT80G2748 Cannabis sativa HOM05D007109 ORTHO05D008813 5.1e-15 84.7 89 49.4
CiPaw.15G135600 Carya illinoinensis HOM05D007109 ORTHO05D008813 8.8e-15 84.0 106 46.2
ClCG09G004450 Citrullus lanatus HOM05D007109 ORTHO05D008813 1.1e-14 83.6 84 51.2
Peaxi162Scf01108g00310 Petunia axillaris HOM05D007109 ORTHO05D008813 1.1e-14 83.6 105 42.9
TWI09G0588 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 1.5e-14 83.2 95 46.3
CsaV3_7G030690 Cucumis sativus L. HOM05D007109 ORTHO05D008813 2.0e-14 82.8 84 48.8
Cpa.g.sc125.54 Carica papaya HOM05D007109 ORTHO05D008813 2.5e-14 82.4 80 55.0
Manes.07G011500 Manihot esculenta HOM05D007109 ORTHO05D008813 3.3e-14 82.0 89 50.6
vmacro13701 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 3.3e-14 82.0 84 51.2
CAN.G909.14 Capsicum annuum HOM05D007109 ORTHO05D008813 4.3e-14 81.6 99 44.4
Cpa.g.c33908 Carica papaya HOM05D007109 ORTHO05D008813 4.3e-14 81.6 80 52.5
Lsat_1_v5_gn_1_104720 Lactuca sativa HOM05D007109 ORTHO05D008813 4.3e-14 81.6 82 46.3
Rhsim07G0059100 Rhododendron simsii HOM05D007109 ORTHO05D008813 4.3e-14 81.6 84 50.0
Gohir.A12G100450 Gossypium hirsutum HOM05D007109 ORTHO05D008813 5.7e-14 81.3 92 51.1
ECA248G3518 Erigeron canadensis HOM05D007109 ORTHO05D008813 7.4e-14 80.9 107 39.3
AUR62023101 Chenopodium quinoa HOM05D007109 ORTHO05D008813 9.7e-14 80.5 125 39.2
MELO3C023587.2 Cucumis melo HOM05D007109 ORTHO05D008813 9.7e-14 80.5 84 47.6
TPR.G8349 Trifolium pratense HOM05D007109 ORTHO05D008813 9.7e-14 80.5 96 47.9
Nitab4.5_0001244g0020 Nicotiana tabacum HOM05D007109 ORTHO05D008813 2.2e-13 79.3 98 43.9
Actinidia19426 Actinidia chinensis HOM05D007109 ORTHO05D008813 2.8e-13 79.0 89 49.4
Lsat_1_v5_gn_1_104740 Lactuca sativa HOM05D007109 ORTHO05D008813 2.8e-13 79.0 82 46.3
Nn7g36341 Nelumbo nucifera HOM05D007109 ORTHO05D008813 2.8e-13 79.0 83 53.0
HanXRQChr01g0007891 Helianthus annuus HOM05D007109 ORTHO05D008813 3.7e-13 78.6 82 45.1
Sopen01g034880 Solanum pennellii HOM05D007109 ORTHO05D008813 4.8e-13 78.2 99 40.4
AUR62009423 Chenopodium quinoa HOM05D007109 ORTHO05D008813 8.2e-13 77.4 93 44.1
Rhsim01G0124900 Rhododendron simsii HOM05D007109 ORTHO05D008813 8.2e-13 77.4 76 48.7
Sc14g0004980 Simmondsia chinensis HOM05D007109 ORTHO05D008813 8.2e-13 77.4 89 48.3
vmacro13699 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 8.2e-13 77.4 84 48.8
Oeu014598.1 Olea europaea HOM05D007109 ORTHO05D008813 1.8e-12 76.3 96 51.0
Solyc01g087980.4 Solanum lycopersicum HOM05D007109 ORTHO05D008813 1.8e-12 76.3 99 39.4
ClCG10G012150 Citrullus lanatus HOM05D007109 ORTHO05D008813 6.9e-12 74.3 96 45.8
Actinidia23253 Actinidia chinensis HOM05D007109 ORTHO05D008813 2.6e-11 72.4 76 52.6
Ah.10g038560 Amaranthus hybridus HOM05D007109 ORTHO05D008813 4.5e-11 71.6 85 45.9
Sed0023192 Sechium edule HOM05D007109 ORTHO05D008813 7.7e-11 70.9 75 49.3
MSTRG.5044 Avicennia marina HOM05D007109 ORTHO05D008813 1.7e-10 69.7 84 47.6
Eucgr.G03285 Eucalyptus grandis HOM05D007109 ORTHO05D008813 2.2e-10 69.3 95 40.0
SGA_v2.0_scaffold354G49753 Striga asiatica HOM05D007109 ORTHO05D008813 2.9e-10 68.9 84 44.0
THA.LOC104827430 Tarenaya hassleriana HOM05D007109 ORTHO05D008813 2.9e-10 68.9 63 50.8
MSTRG.20556 Avicennia marina HOM05D007109 ORTHO05D008813 3.8e-10 68.6 78 43.6
MELO3C024000.2 Cucumis melo HOM05D007109 ORTHO05D008813 6.5e-10 67.8 82 43.9
Sed0019738 Sechium edule HOM05D007109 ORTHO05D008813 1.4e-09 66.6 77 41.6
Oeu049473.1 Olea europaea HOM05D007109 ORTHO05D008813 1.9e-09 66.2 93 38.7
Actinidia08354 Actinidia chinensis HOM05D007109 ORTHO05D008813 3.2e-09 65.5 76 48.7
Actinidia25349 Actinidia chinensis HOM05D007109 ORTHO05D008813 3.2e-09 65.5 76 48.7
MSTRG.17005 Avicennia marina HOM05D007109 ORTHO05D008813 1.6e-08 63.2 79 44.3
Solyc04g050200.1 Solanum lycopersicum HOM05D007109 ORTHO05D008813 4.7e-08 61.6 68 42.6
Migut.B01258 Erythranthe guttata HOM05D007109 ORTHO05D008813 7.9e-08 60.8 89 39.3
Migut.B01259 Erythranthe guttata HOM05D007109 ORTHO05D008813 1.8e-07 59.7 88 40.9
Sed0007712 Sechium edule HOM05D007109 ORTHO05D008813 2.3e-07 59.3 83 41.0
Sed0006814 Sechium edule HOM05D007109 ORTHO05D008813 1.1e-06 57.0 89 39.3
unitig_22.g5431 Utricularia gibba HOM05D007109 ORTHO05D008813 1.1e-06 57.0 68 39.7
SGA_v2.0_scaffold4G02475 Striga asiatica HOM05D007109 ORTHO05D008813 2.0e-06 56.2 73 43.8


User provided reference genes

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