Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40149 Trifolium pratense HOM05D010415 ORTHO05D013002 1.9e-62 242.3 116 100.0
Medtr3g076950 Medicago truncatula HOM05D010415 ORTHO05D013002 9.0e-49 196.8 116 84.5
Psat5g118200 Pisum sativum HOM05D010415 ORTHO05D013002 1.4e-38 162.9 115 74.8
Medtr3g076960 Medicago truncatula HOM05D010415 ORTHO05D013002 7.2e-38 160.6 116 75.9
Lj5g0011006 Lotus japonicus HOM05D010415 ORTHO05D013002 7.7e-32 140.6 117 67.5
Ca_16130_v3 Cicer arietinum L. HOM05D010415 ORTHO05D013002 2.2e-26 122.5 129 58.9
arahy.Tifrunner.gnm1.ann1.TC1G7F Arachis hypogaea HOM05D010415 ORTHO05D013002 3.7e-18 95.1 118 50.0
Lalb_Chr08g0236771 Lupinus albus HOM05D010415 ORTHO05D021462 5.3e-17 91.3 91 54.9
Lj1g0011825 Lotus japonicus HOM05D010415 ORTHO05D021462 9.1e-17 90.5 102 57.8
Lalb_Chr23g0273341 Lupinus albus HOM05D010415 ORTHO05D013002 2.7e-16 89.0 103 54.4
Phvul.003G205100 Phaseolus vulgaris HOM05D010415 ORTHO05D013002 1.0e-15 87.0 116 45.7
arahy.Tifrunner.gnm1.ann1.X35675 Arachis hypogaea HOM05D010415 ORTHO05D013002 1.3e-15 86.7 123 44.7
Glyma.17G084600 Glycine max HOM05D010415 ORTHO05D013002 1.3e-15 86.7 116 48.3
arahy.Tifrunner.gnm1.ann1.ACX0GK Arachis hypogaea HOM05D010415 ORTHO05D013002 7.2e-14 80.9 121 44.6
Lj4g0001100 Lotus japonicus HOM05D010415 ORTHO05D013002 3.6e-13 78.6 112 42.0
Lj4g0001710 Lotus japonicus HOM05D010415 ORTHO05D013002 4.7e-13 78.2 112 41.1
arahy.Tifrunner.gnm1.ann1.K5YE58 Arachis hypogaea HOM05D010415 ORTHO05D013002 1.0e-12 77.0 123 42.3
Glyma.06G177600 Glycine max HOM05D010415 ORTHO05D013002 1.4e-12 76.6 102 46.1
Glyma.06G177500 Glycine max HOM05D010415 ORTHO05D013002 2.0e-11 72.8 85 50.6
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 1.3e-10 70.1 115 34.8
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 3.7e-10 68.6 111 36.9
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 1.6e-08 63.2 113 32.7
Eucgr.B00219 Eucalyptus grandis HOM05D008921 ORTHO05D010506 2.0e-08 62.8 118 31.4
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 2.7e-08 62.4 113 31.0
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 5.9e-08 61.2 118 32.2
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 2.3e-07 59.3 113 33.6


User provided reference genes

Program Settings