Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40140 Trifolium pratense HOM05D050112 ORTHO05D412771 8.2e-77 290.4 159 100.0
TPR.G24727 Trifolium pratense HOM05D000075 ORTHO05D000073 1.4e-39 166.8 89 95.5
TPR.G29899 Trifolium pratense HOM05D050112 ORTHO05D412590 8.7e-10 67.8 33 100.0
Medtr4g117280 Medicago truncatula HOM05D001530 ORTHO05D003676 2.8e-08 62.8 67 55.2
Psat4g031520 Pisum sativum HOM05D001530 ORTHO05D003676 1.4e-07 60.5 67 49.3
Ca_21593_v3 Cicer arietinum L. HOM05D001530 ORTHO05D003676 4.0e-07 58.9 67 50.7
BcaB01g05131 Brassica carinata HOM05D001530 ORTHO05D003676 6.9e-07 58.2 67 50.7
C03p10870 Brassica napus HOM05D001530 ORTHO05D003676 6.9e-07 58.2 67 50.7
TPR.G20135 Trifolium pratense HOM05D001530 ORTHO05D003676 6.9e-07 58.2 67 49.3
CSS0045949 Camellia sinensis var. sinensis HOM05D001530 ORTHO05D003676 1.5e-06 57.0 67 52.2
Glyma.17G017100 Glycine max HOM05D001530 ORTHO05D003676 2.6e-06 56.2 67 50.7
GSVIVG01017888001 Vitis vinifera HOM05D001530 ORTHO05D003676 3.4e-06 55.8 67 52.2
Phvul.003G092700 Phaseolus vulgaris HOM05D001530 ORTHO05D003676 4.5e-06 55.5 67 49.3
BolC3t13563H Brassica oleracea HOM05D001530 ORTHO05D003676 5.8e-06 55.1 67 49.3
CAN.G183.23 Capsicum annuum HOM05D001530 ORTHO05D003676 5.8e-06 55.1 67 49.3
ClCG06G005810 Citrullus lanatus HOM05D001530 ORTHO05D003676 5.8e-06 55.1 67 52.2
Nitab4.5_0000267g0050 Nicotiana tabacum HOM05D001530 ORTHO05D003676 5.8e-06 55.1 67 49.3
Nitab4.5_0001247g0080 Nicotiana tabacum HOM05D001530 ORTHO05D003676 5.8e-06 55.1 67 49.3
HPP92_011813 Vanilla planifolia HOM05D001530 ORTHO05D003676 5.8e-06 55.1 69 47.8
CARHR002560 Cardamine hirsuta HOM05D001530 ORTHO05D003676 7.6e-06 54.7 67 47.8
MELO3C021403.2 Cucumis melo HOM05D001530 ORTHO05D003676 7.6e-06 54.7 67 50.7
CsaV3_6G018580 Cucumis sativus L. HOM05D001530 ORTHO05D003676 7.6e-06 54.7 67 50.7
Nn4g26193 Nelumbo nucifera HOM05D001530 ORTHO05D003676 7.6e-06 54.7 67 47.8
Solyc01g080110.3 Solanum lycopersicum HOM05D001530 ORTHO05D003676 7.6e-06 54.7 67 49.3
Sopen01g031890 Solanum pennellii HOM05D001530 ORTHO05D003676 7.6e-06 54.7 67 49.3
Cfa006116 Carpinus fangiana HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 46.3
Ca_00645_v3 Cicer arietinum L. HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
COL.COLO4_21647 Corchorus olitorius HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 9.9e-06 54.3 67 50.7
Glyma.13G208800 Glycine max HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
Glyma.15G104000 Glycine max HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
Lj2A1176T51 Lonicera japonica HOM05D001530 ORTHO05D003676 9.9e-06 54.3 36 72.2
Lalb_Chr20g0118421 Lupinus albus HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
Medtr2g022180 Medicago truncatula HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
Nn1g02164 Nelumbo nucifera HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 46.3
Psat1g183600 Pisum sativum HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
Prupe.1G151400 Prunus persica HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
Sp1g02260 Schrenkiella parvula HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 49.3
Sc17g0004010 Simmondsia chinensis HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 47.8
Thecc.04G221600 Theobroma cacao HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 50.7
TAR362G0371 Trochodendron aralioides HOM05D001530 ORTHO05D003676 9.9e-06 54.3 67 49.3


User provided reference genes

Program Settings