Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4014 Trifolium pratense HOM05D000538 ORTHO05D000614 5.6e-53 211.8 239 100.0
Psat5g127240 Pisum sativum HOM05D000538 ORTHO05D000614 6.7e-14 82.0 116 49.1
Medtr3g070120 Medicago truncatula HOM05D000538 ORTHO05D000614 9.7e-13 78.2 107 69.2
Ca_17144_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 6.9e-11 72.0 97 60.8
Lj6g0024738 Lotus japonicus HOM05D000538 ORTHO05D000614 1.9e-08 63.9 41 65.9
Manes.16G016900 Manihot esculenta HOM05D000538 ORTHO05D000614 1.9e-08 63.9 120 36.7
Prupe.3G046700 Prunus persica HOM05D002395 ORTHO05D000614 2.5e-08 63.5 117 37.6
Sed0014375 Sechium edule HOM05D000538 ORTHO05D000614 7.2e-08 62.0 118 36.4
Duzib213G0266 Durio zibethinus HOM05D000538 ORTHO05D000614 9.4e-08 61.6 115 34.8
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 1.2e-07 61.2 116 36.2
Manes.07G017600 Manihot esculenta HOM05D000538 ORTHO05D000614 2.7e-07 60.1 120 32.5
Ca_00207_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 3.6e-07 59.7 158 48.1
Lalb_Chr05g0228411 Lupinus albus HOM05D000538 ORTHO05D000614 6.1e-07 58.9 113 37.2
Psat1g211120 Pisum sativum HOM05D000538 ORTHO05D000614 6.1e-07 58.9 100 45.0
Lalb_Chr16g0392201 Lupinus albus HOM05D000538 ORTHO05D000614 1.0e-06 58.2 122 38.5
Medtr2g010790 Medicago truncatula HOM05D000538 ORTHO05D000614 1.0e-06 58.2 113 46.9
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 1.8e-06 57.4 117 33.3
arahy.Tifrunner.gnm1.ann1.AC8M2L Arachis hypogaea HOM05D000538 ORTHO05D000614 2.3e-06 57.0 86 40.7
arahy.Tifrunner.gnm1.ann1.JZ11TB Arachis hypogaea HOM05D000538 ORTHO05D000614 2.3e-06 57.0 86 40.7
arahy.Tifrunner.gnm1.ann1.L9U4X5 Arachis hypogaea HOM05D000538 ORTHO05D000614 2.3e-06 57.0 86 40.7
Potri.001G293900 Populus trichocarpa HOM05D000538 ORTHO05D000614 2.3e-06 57.0 123 33.3
arahy.Tifrunner.gnm1.ann1.DZ7Z6Q Arachis hypogaea HOM05D000538 ORTHO05D000614 3.0e-06 56.6 109 33.9
arahy.Tifrunner.gnm1.ann1.ZZ4VEM Arachis hypogaea HOM05D000538 ORTHO05D000614 3.0e-06 56.6 87 37.9
Gohir.A01G040800 Gossypium hirsutum HOM05D000538 ORTHO05D000614 3.0e-06 56.6 160 30.0
Sed0011252 Sechium edule HOM05D000538 ORTHO05D000614 3.0e-06 56.6 114 34.2
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 3.9e-06 56.2 115 35.7
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 5.1e-06 55.8 124 35.5
Duzib268G1429 Durio zibethinus HOM05D000538 ORTHO05D000614 5.1e-06 55.8 115 33.9
Lj2g0017985 Lotus japonicus HOM05D000538 ORTHO05D000614 5.1e-06 55.8 41 58.5
Lj2g0028107 Lotus japonicus HOM05D000538 ORTHO05D000614 5.1e-06 55.8 41 61.0
MELO3C032586.2 Cucumis melo HOM05D000538 ORTHO05D000614 6.7e-06 55.5 100 36.0
Sabra16G0183500 Salix brachista HOM05D000538 ORTHO05D000614 6.7e-06 55.5 113 32.7
Thecc.07G148000 Theobroma cacao HOM05D000538 ORTHO05D000614 6.7e-06 55.5 114 34.2
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 8.8e-06 55.1 116 34.5
Gohir.D01G028300 Gossypium hirsutum HOM05D000538 ORTHO05D000614 8.8e-06 55.1 160 29.4
Gorai.002G037800 Gossypium raimondii HOM05D000538 ORTHO05D000614 8.8e-06 55.1 160 29.4
Psat1g014720 Pisum sativum HOM05D000538 ORTHO05D000614 8.8e-06 55.1 101 39.6


User provided reference genes

Program Settings