Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4013 Trifolium pratense HOM05D005976 ORTHO05D007149 1.0e-41 172.9 83 100.0
TPR.G27924 Trifolium pratense HOM05D005976 ORTHO05D007149 2.2e-12 75.5 35 94.3
Psat4g106360 Pisum sativum HOM05D005976 ORTHO05D007149 1.4e-11 72.8 35 88.6
Ca_22438_v3 Cicer arietinum L. HOM05D005976 ORTHO05D007149 1.2e-10 69.7 35 80.0
Glyma.16G112900 Glycine max HOM05D005976 ORTHO05D007149 1.0e-09 66.6 35 77.1
Medtr8g072710 Medicago truncatula HOM05D005976 ORTHO05D007149 2.9e-09 65.1 35 80.0
AL8G45690 Arabidopsis lyrata HOM05D005976 ORTHO05D007149 5.0e-09 64.3 35 65.7
AT5G65950 Arabidopsis thaliana HOM05D005976 ORTHO05D007149 5.0e-09 64.3 35 65.7
Carub.0008s2857 Capsella rubella HOM05D005976 ORTHO05D007149 5.0e-09 64.3 35 65.7
Lalb_Chr16g0391711 Lupinus albus HOM05D005976 ORTHO05D007149 5.0e-09 64.3 35 74.3
Sp2g30740 Schrenkiella parvula HOM05D005976 ORTHO05D007149 5.0e-09 64.3 35 65.7
CARHR281820 Cardamine hirsuta HOM05D005976 ORTHO05D007149 6.5e-09 63.9 35 62.9
Glyma.09G196100 Glycine max HOM05D005976 ORTHO05D007149 8.5e-09 63.5 35 71.4
Thhalv10003539m.g Eutrema salsugineum HOM05D005976 ORTHO05D007149 1.1e-08 63.2 35 62.9
Cpa.g.sc6.347 Carica papaya HOM05D005976 ORTHO05D007149 1.9e-08 62.4 35 68.6
PSO675G7053 Papaver somniferum HOM05D005976 ORTHO05D007149 1.9e-08 62.4 35 68.6
VMungo0251G2412 Vigna mungo HOM05D005976 ORTHO05D007149 3.2e-08 61.6 35 71.4
ClCG01G020980 Citrullus lanatus HOM05D005976 ORTHO05D007149 4.2e-08 61.2 35 65.7
MELO3C007982.2 Cucumis melo HOM05D005976 ORTHO05D007149 4.2e-08 61.2 35 65.7
CsaV3_6G047940 Cucumis sativus L. HOM05D005976 ORTHO05D007149 4.2e-08 61.2 35 65.7
Phvul.003G271600 Phaseolus vulgaris HOM05D005976 ORTHO05D007149 4.2e-08 61.2 35 68.6
Aa31LG1G14470 Aethionema arabicum HOM05D005976 ORTHO05D007149 5.5e-08 60.8 35 62.9
arahy.Tifrunner.gnm1.ann1.8BHC3E Arachis hypogaea HOM05D005976 ORTHO05D007149 7.2e-08 60.5 35 68.6
THA.LOC104819155 Tarenaya hassleriana HOM05D005976 ORTHO05D007149 7.2e-08 60.5 35 62.9
A08p00020 Brassica napus HOM05D005976 ORTHO05D007149 9.4e-08 60.1 35 60.0
BraA08t32059Z Brassica rapa HOM05D005976 ORTHO05D007149 9.4e-08 60.1 35 60.0
Migut.D02574 Erythranthe guttata HOM05D005976 ORTHO05D007149 1.2e-07 59.7 35 65.7
Migut.D02599 Erythranthe guttata HOM05D005976 ORTHO05D007149 1.2e-07 59.7 35 65.7
arahy.Tifrunner.gnm1.ann1.2S25M9 Arachis hypogaea HOM05D005976 ORTHO05D007149 1.6e-07 59.3 35 65.7
Lj4g0003913 Lotus japonicus HOM05D005976 ORTHO05D007149 2.7e-07 58.5 35 68.6
BolC3t21644H Brassica oleracea HOM05D005976 ORTHO05D007149 3.6e-07 58.2 35 57.1
ATR0605G043 Amborella trichopoda HOM05D005976 ORTHO05D007149 4.7e-07 57.8 35 60.0
AagrBONN_evm.TU.Sc2ySwM_117.3206 Anthoceros agrestis HOM05D005976 ORTHO05D007149 4.7e-07 57.8 35 65.7
Gohir.A07G172300 Gossypium hirsutum HOM05D005976 ORTHO05D007149 4.7e-07 57.8 35 65.7
Gohir.D07G179000 Gossypium hirsutum HOM05D005976 ORTHO05D007149 4.7e-07 57.8 35 65.7
Gorai.001G200200 Gossypium raimondii HOM05D005976 ORTHO05D007149 4.7e-07 57.8 35 65.7
Atru.chr3.58 Acer truncatum HOM05D005976 ORTHO05D007149 6.1e-07 57.4 35 65.7
Cc07_g12200 Coffea canephora HOM05D005976 ORTHO05D007149 6.1e-07 57.4 35 60.0
Potri.011G144700 Populus trichocarpa HOM05D005976 ORTHO05D007149 8.0e-07 57.0 35 60.0
Prupe.7G186800 Prunus persica HOM05D005976 ORTHO05D007149 8.0e-07 57.0 35 62.9
Ciclev10026942m.g Citrus clementina HOM05D005976 ORTHO05D007149 1.0e-06 56.6 35 62.9
Dinv40218 Davidia involucrata HOM05D005976 ORTHO05D007149 1.0e-06 56.6 35 57.1
Nitab4.5_0000855g0090 Nicotiana tabacum HOM05D005976 ORTHO05D007149 1.0e-06 56.6 35 60.0
Actinidia28755 Actinidia chinensis HOM05D005976 ORTHO05D007149 1.4e-06 56.2 35 57.1
CAN.G1428.10 Capsicum annuum HOM05D005976 ORTHO05D007149 1.4e-06 56.2 35 57.1
CDE06G1894 Ceratophyllum demersum HOM05D005976 ORTHO05D007149 1.4e-06 56.2 35 62.9
Hma1.2p1_0085F.1_g044360 Hydrangea macrophylla HOM05D005976 ORTHO05D007149 1.4e-06 56.2 35 57.1
Hma1.2p1_0085F.1_g044370 Hydrangea macrophylla HOM05D005976 ORTHO05D007149 1.4e-06 56.2 35 57.1
TAR381G0142 Trochodendron aralioides HOM05D005976 ORTHO05D007149 1.4e-06 56.2 35 57.1
COL.COLO4_25046 Corchorus olitorius HOM05D005976 ORTHO05D007149 1.8e-06 55.8 35 62.9
Nitab4.5_0011596g0010 Nicotiana tabacum HOM05D005976 ORTHO05D007149 1.8e-06 55.8 35 57.1
Sc03g0004130 Simmondsia chinensis HOM05D005976 ORTHO05D007149 1.8e-06 55.8 35 57.1
Solyc02g082280.3 Solanum lycopersicum HOM05D005976 ORTHO05D007149 1.8e-06 55.8 35 57.1
Sopen02g026940 Solanum pennellii HOM05D005976 ORTHO05D007149 1.8e-06 55.8 35 57.1
SEGI_34852 Sequoiadendron giganteum HOM05D005976 ORTHO05D007149 2.3e-06 55.5 35 57.1
Duzib147G1500 Durio zibethinus HOM05D005976 ORTHO05D007149 3.0e-06 55.1 77 40.3
Peaxi162Scf00677g00223 Petunia axillaris HOM05D005976 ORTHO05D007149 4.0e-06 54.7 35 57.1
vmacro18477 Vaccinium macrocarpon HOM05D005976 ORTHO05D007149 4.0e-06 54.7 32 62.5
Aqoxy6G02993 Aquilegia oxysepala HOM05D005976 ORTHO05D007149 5.2e-06 54.3 35 57.1
MBI04_g31209_MAGBIO Magnolia biondii HOM05D005976 ORTHO05D007149 5.2e-06 54.3 35 54.3
Hund03583 Selenicereus undatus HOM05D005976 ORTHO05D007149 5.2e-06 54.3 35 57.1
unitig_746.g26634 Utricularia gibba HOM05D005976 ORTHO05D007149 5.2e-06 54.3 35 62.9
Rhsim08G0025900 Rhododendron simsii HOM05D005976 ORTHO05D007149 6.8e-06 53.9 32 62.5
Sabra11G0129800 Salix brachista HOM05D005976 ORTHO05D007149 6.8e-06 53.9 35 51.4
PGSC0003DMG402013639 Solanum tuberosum HOM05D005976 ORTHO05D007149 6.8e-06 53.9 35 54.3
CiPaw.06G032800 Carya illinoinensis HOM05D005976 ORTHO05D007149 8.8e-06 53.5 35 62.9
MD15G1228100 Malus domestica HOM05D005976 ORTHO05D007149 8.8e-06 53.5 35 60.0
PGR119G1871 Punica granatum HOM05D005976 ORTHO05D007149 8.8e-06 53.5 35 60.0


User provided reference genes

Program Settings