Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 4.4e-77 291.2 144 100.0
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 9.1e-67 256.9 137 92.0
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 8.9e-62 240.4 137 83.9
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 5.0e-57 224.6 137 81.8
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 7.8e-50 200.7 137 70.8
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 4.9e-44 181.4 137 67.9
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 4.6e-42 174.9 142 68.3
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 1.0e-41 173.7 142 66.9
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 1.0e-41 173.7 137 62.0
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 6.6e-41 171.0 138 65.9
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 5.6e-40 167.9 138 61.6
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 1.2e-37 160.2 153 54.9
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 1.9e-35 152.9 149 57.0
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 1.6e-34 149.8 148 53.4
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 3.5e-34 148.7 149 56.4
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 3.5e-34 148.7 149 56.4
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.3e-33 146.0 149 55.0
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 6.6e-33 144.4 104 67.3
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 1.2e-31 140.2 138 52.2
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 2.8e-31 139.0 162 47.5
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 2.8e-31 139.0 134 53.7
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 8.1e-31 137.5 99 64.6
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.1e-30 137.1 92 67.4
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 1.1e-30 137.1 92 67.4
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.1e-30 137.1 92 67.4
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.1e-30 137.1 92 67.4
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 1.1e-30 137.1 92 67.4
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.1e-30 137.1 87 69.0
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 1.1e-30 137.1 87 69.0
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.4e-30 136.7 87 69.0
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.8e-30 136.3 87 69.0
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 1.8e-30 136.3 87 69.0
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 1.8e-30 136.3 89 67.4
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 1.8e-30 136.3 128 53.1
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 2.4e-30 136.0 92 66.3
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 2.4e-30 136.0 93 64.5
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 4.0e-30 135.2 92 65.2
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 4.0e-30 135.2 92 64.1
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 6.8e-30 134.4 89 66.3
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.2e-29 133.7 89 64.0
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 2.0e-29 132.9 94 66.0
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 2.6e-29 132.5 132 50.8
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 2.6e-29 132.5 92 64.1
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 9.9e-29 130.6 143 49.0
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 1.3e-28 130.2 98 63.3
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 2.2e-28 129.4 149 51.0
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 2.9e-28 129.0 134 51.5
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 4.9e-28 128.3 87 67.8
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 8.4e-28 127.5 145 49.7
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 1.4e-27 126.7 145 52.4
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 4.1e-27 125.2 132 47.0
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 4.1e-27 125.2 98 64.3
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 4.1e-27 125.2 135 48.9
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 5.4e-27 124.8 132 48.5
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 7.1e-27 124.4 92 63.0
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 9.2e-27 124.0 92 62.0
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 9.2e-27 124.0 92 62.0
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 9.2e-27 124.0 133 49.6
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 1.2e-26 123.6 100 58.0
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.2e-26 123.6 89 61.8
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 1.6e-26 123.2 120 50.0
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 2.1e-26 122.9 142 50.0
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 2.1e-26 122.9 89 59.6
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 2.7e-26 122.5 134 48.5
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 7.8e-26 120.9 126 50.8
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 7.8e-26 120.9 126 50.8
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.3e-25 120.2 123 49.6
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 1.3e-25 120.2 149 48.3
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 3.0e-25 119.0 100 54.0
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 6.6e-25 117.9 132 48.5
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 1.1e-24 117.1 135 49.6
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 1.1e-24 117.1 104 55.8
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 1.9e-24 116.3 142 47.2
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 1.9e-24 116.3 135 49.6
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 2.5e-24 115.9 89 57.3
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.2e-23 113.6 82 61.0
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 2.1e-23 112.8 148 46.6
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 2.1e-23 112.8 90 54.4
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 1.4e-22 110.2 82 61.0
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.8e-22 109.8 93 50.5
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 6.9e-22 107.8 113 50.4
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 2.6e-21 105.9 101 49.5
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 4.4e-21 105.1 127 48.0
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 2.9e-20 102.4 148 43.2
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 6.4e-20 101.3 72 61.1
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 7.1e-19 97.8 107 49.5
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 2.7e-18 95.9 126 41.3
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 4.6e-18 95.1 58 69.0
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 7.8e-18 94.4 141 44.7
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.3e-17 93.6 249 32.1
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 2.5e-16 89.4 62 61.3
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 9.6e-16 87.4 134 39.6
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 3.1e-14 82.4 85 47.1
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 1.2e-10 70.5 82 47.6
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 1.5e-08 63.5 97 37.1
SEGI_03305 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 2.4e-06 56.2 64 45.3
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 9.0e-06 54.3 26 84.6


User provided reference genes

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