Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40005 Trifolium pratense HOM05D004277 ORTHO05D005148 9.9e-77 290.0 147 100.0
Ca_12380_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 4.0e-70 268.1 147 90.5
Ca_12388_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 4.0e-70 268.1 147 90.5
Medtr1g038850 Medicago truncatula HOM05D004277 ORTHO05D005148 1.1e-67 260.0 147 87.8
Psat6g100160 Pisum sativum HOM05D004277 ORTHO05D005148 1.0e-65 253.4 144 90.3
Lj2g0013005 Lotus japonicus HOM05D004277 ORTHO05D005148 3.2e-59 231.9 147 78.2
Glyma.09G284900 Glycine max HOM05D004277 ORTHO05D005148 4.6e-58 228.0 146 79.5
VMungo0251G3136 Vigna mungo HOM05D004277 ORTHO05D005148 7.4e-56 220.7 147 76.2
arahy.Tifrunner.gnm1.ann1.3DGA3E Arachis hypogaea HOM05D004277 ORTHO05D005148 4.8e-55 218.0 146 74.7
arahy.Tifrunner.gnm1.ann1.J7P8I0 Arachis hypogaea HOM05D004277 ORTHO05D005148 1.4e-54 216.5 147 73.5
Phvul.003G002100 Phaseolus vulgaris HOM05D004277 ORTHO05D005148 9.1e-54 213.8 147 74.1
Lalb_Chr18g0046601 Lupinus albus HOM05D004277 ORTHO05D005148 1.0e-52 210.3 143 75.5
FvH4_3g15310 Fragaria vesca HOM05D004277 ORTHO05D005148 2.3e-49 199.1 150 66.7
FAN16G3091 Fragaria x ananassa HOM05D004277 ORTHO05D005148 2.3e-49 199.1 150 67.3
FAN21G0666 Fragaria x ananassa HOM05D004277 ORTHO05D005148 2.3e-49 199.1 150 67.3
RcHm_v2.0_Chr5g0025751 Rosa chinensis HOM05D004277 ORTHO05D005148 3.0e-49 198.7 142 67.6
MD05G1224300 Malus domestica HOM05D004277 ORTHO05D005148 3.9e-49 198.4 150 68.7
Atru.chr1.126 Acer truncatum HOM05D004277 ORTHO05D005148 6.7e-49 197.6 149 67.8
FAN11G0660 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.7e-47 193.0 150 66.0
GSVIVG01036797001 Vitis vinifera HOM05D004277 ORTHO05D005148 4.8e-47 191.4 148 66.9
Ciclev10007189m.g Citrus clementina HOM05D004277 ORTHO05D005148 8.2e-47 190.7 150 66.0
Manes.03G176500 Manihot esculenta HOM05D004277 ORTHO05D005148 1.8e-46 189.5 137 70.1
Prupe.4G136200 Prunus persica HOM05D004277 ORTHO05D005148 1.8e-46 189.5 138 67.4
Cpa.g.sc34.11 Carica papaya HOM05D004277 ORTHO05D005148 3.1e-46 188.7 140 66.4
vmacro11705 Vaccinium macrocarpon HOM05D004277 ORTHO05D005148 4.1e-46 188.3 141 68.8
CiPaw.11G062700 Carya illinoinensis HOM05D004277 ORTHO05D005148 9.1e-46 187.2 150 64.7
Gohir.A08G232300 Gossypium hirsutum HOM05D004277 ORTHO05D005148 1.5e-45 186.4 140 68.6
Dinv19596 Davidia involucrata HOM05D004277 ORTHO05D005148 2.6e-45 185.7 141 68.1
CANSAT80G1893 Cannabis sativa HOM05D004277 ORTHO05D005148 3.4e-45 185.3 150 62.7
Haze_07823 Corylus avellana HOM05D004277 ORTHO05D005148 3.4e-45 185.3 150 64.7
DCAR_019921 Daucus carota HOM05D004277 ORTHO05D005148 4.5e-45 184.9 141 67.4
CSS0042003 Camellia sinensis var. sinensis HOM05D004277 ORTHO05D005148 5.9e-45 184.5 140 67.1
TWI38G1370 Tripterygium wilfordii HOM05D004277 ORTHO05D005148 5.9e-45 184.5 141 65.2
Cc05_g16300 Coffea canephora HOM05D004277 ORTHO05D005148 1.3e-44 183.3 142 66.2
COL.COLO4_05147 Corchorus olitorius HOM05D004277 ORTHO05D004634 2.2e-44 182.6 140 66.4
Actinidia12771 Actinidia chinensis HOM05D004277 ORTHO05D005148 6.5e-44 181.0 150 65.3
CsaV3_7G022870 Cucumis sativus L. HOM05D004277 ORTHO05D005148 6.5e-44 181.0 140 65.0
Eucgr.F04450 Eucalyptus grandis HOM05D004277 ORTHO05D005148 6.5e-44 181.0 150 61.3
Lj2A15G78 Lonicera japonica HOM05D004277 ORTHO05D005148 1.1e-43 180.3 140 66.4
Sed0006880 Sechium edule HOM05D004277 ORTHO05D005148 1.1e-43 180.3 140 64.3
Gorai.004G269300 Gossypium raimondii HOM05D004277 ORTHO05D005148 1.4e-43 179.9 140 66.4
TAR626G1109 Trochodendron aralioides HOM05D004277 ORTHO05D005148 2.5e-43 179.1 150 64.0
Gohir.D08G252532 Gossypium hirsutum HOM05D004277 ORTHO05D005148 5.5e-43 177.9 140 65.7
MELO3C012612.2 Cucumis melo HOM05D004277 ORTHO05D005148 7.2e-43 177.6 140 63.6
Thecc.07G167700 Theobroma cacao HOM05D004277 ORTHO05D005148 7.2e-43 177.6 140 65.0
ClCG09G022670 Citrullus lanatus HOM05D004277 ORTHO05D005148 9.4e-43 177.2 140 62.9
Potri.007G067700 Populus trichocarpa HOM05D004277 ORTHO05D005148 9.4e-43 177.2 141 66.7
ECA240G2290 Erigeron canadensis HOM05D004277 ORTHO05D005148 1.2e-42 176.8 140 62.1
Sabra07G0053700 Salix brachista HOM05D004277 ORTHO05D005148 2.7e-42 175.6 141 64.5
MBI02_g15959_MAGBIO Magnolia biondii HOM05D004277 ORTHO05D005148 6.1e-42 174.5 141 60.3
PGR031G1415 Punica granatum HOM05D004277 ORTHO05D005148 6.1e-42 174.5 137 64.2
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 6.1e-42 174.5 141 63.8
Nn3g21002 Nelumbo nucifera HOM05D004277 ORTHO05D005148 8.0e-42 174.1 141 62.4
PSO210G0403 Papaver somniferum HOM05D004277 ORTHO05D005148 8.0e-42 174.1 138 65.2
Peaxi162Scf00078g01336 Petunia axillaris HOM05D004277 ORTHO05D005148 8.0e-42 174.1 150 63.3
Solyc12g017280.2 Solanum lycopersicum HOM05D004277 ORTHO05D005148 1.0e-41 173.7 149 63.8
Sopen12g008110 Solanum pennellii HOM05D004277 ORTHO05D005148 1.0e-41 173.7 149 63.8
Peaxi162Scf00006g01510 Petunia axillaris HOM05D004277 ORTHO05D005148 1.8e-41 172.9 150 63.3
Aqoxy7G03893 Aquilegia oxysepala HOM05D004277 ORTHO05D005148 2.3e-41 172.6 141 61.7
SGA_v2.0_scaffold239G44031 Striga asiatica HOM05D004277 ORTHO05D005148 3.9e-41 171.8 149 58.4
Rhsim06G0241600 Rhododendron simsii HOM05D004277 ORTHO05D005148 5.2e-41 171.4 141 64.5
Thhalv10018016m.g Eutrema salsugineum HOM05D004277 ORTHO05D005148 1.5e-40 169.9 142 58.5
THA.LOC104812364 Tarenaya hassleriana HOM05D004277 ORTHO05D005148 2.0e-40 169.5 140 58.6
Oeu019710.1 Olea europaea HOM05D004277 ORTHO05D005148 2.6e-40 169.1 141 61.7
HanXRQChr03g0078241 Helianthus annuus HOM05D004277 ORTHO05D005148 3.3e-40 168.7 137 60.6
Aa31LG4G1820 Aethionema arabicum HOM05D004277 ORTHO05D005148 7.4e-40 167.5 142 58.5
Nitab4.5_0000388g0130 Nicotiana tabacum HOM05D004277 ORTHO05D005148 7.4e-40 167.5 141 63.1
C02p36270 Brassica napus HOM05D004277 ORTHO05D005148 2.2e-39 166.0 142 57.7
BcaC03g15873 Brassica carinata HOM05D004277 ORTHO05D005148 2.8e-39 165.6 142 57.7
BolC2t09641H Brassica oleracea HOM05D004277 ORTHO05D005148 2.8e-39 165.6 142 57.7
AUR62036983 Chenopodium quinoa HOM05D004277 ORTHO05D005148 3.7e-39 165.2 135 61.5
PSO210G1337 Papaver somniferum HOM05D004277 ORTHO05D005148 3.7e-39 165.2 138 62.3
EL10Ac2g03265 Beta vulgaris HOM05D004277 ORTHO05D005148 6.3e-39 164.5 139 60.4
BraA02t07267Z Brassica rapa HOM05D004277 ORTHO05D005148 6.3e-39 164.5 142 57.0
CARHR072840 Cardamine hirsuta HOM05D004277 ORTHO05D005148 8.2e-39 164.1 143 57.3
Sp5g34240 Schrenkiella parvula HOM05D004277 ORTHO05D005148 8.2e-39 164.1 142 57.7
HPP92_021082 Vanilla planifolia HOM05D004277 ORTHO05D005148 1.1e-38 163.7 141 58.9
Migut.H01674 Erythranthe guttata HOM05D004277 ORTHO05D005148 2.4e-38 162.5 137 59.9
BcaB05g25178 Brassica carinata HOM05D004277 ORTHO05D005148 3.1e-38 162.2 142 57.7
Carub.0002s2606 Capsella rubella HOM05D004277 ORTHO05D005148 3.1e-38 162.2 143 56.6
Lsat_1_v5_gn_7_70840 Lactuca sativa HOM05D004277 ORTHO05D005148 3.1e-38 162.2 141 60.3
A02p22660 Brassica napus HOM05D004277 ORTHO05D005148 4.1e-38 161.8 142 57.0
AL2G39660 Arabidopsis lyrata HOM05D004277 ORTHO05D005148 9.1e-38 160.6 145 57.9
SalBow7G4120 Salvia bowleyana HOM05D004277 ORTHO05D005148 1.6e-37 159.8 149 57.0
Sc06g0002790 Simmondsia chinensis HOM05D004277 ORTHO05D005148 1.6e-37 159.8 140 55.7
AT1G79190 Arabidopsis thaliana HOM05D004277 ORTHO05D005148 2.6e-37 159.1 145 57.9
AUR62006227 Chenopodium quinoa HOM05D004277 ORTHO05D005148 5.9e-37 157.9 135 60.0
Ah.02g131470 Amaranthus hybridus HOM05D004277 ORTHO05D005148 1.5e-35 153.3 138 56.5
TAR624G0115 Trochodendron aralioides HOM05D004277 ORTHO05D005148 3.2e-35 152.1 142 57.0
ATR0763G037 Amborella trichopoda HOM05D004277 ORTHO05D005148 4.2e-35 151.8 141 52.5
unitig_8.g4753 Utricularia gibba HOM05D004277 ORTHO05D005148 8.0e-34 147.5 140 52.1
Zm00001eb224850 Zea mays HOM05D004277 ORTHO05D005148 1.8e-33 146.4 138 54.3
Zm00001eb060300 Zea mays HOM05D004277 ORTHO05D005148 3.3e-32 142.1 138 52.9
BcaB02g08672 Brassica carinata HOM05D004277 ORTHO05D005148 1.7e-31 139.8 143 51.7
MD10G1205800 Malus domestica HOM05D004277 ORTHO05D005148 1.5e-24 116.7 91 65.9
CDE05G3501 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 9.8e-24 114.0 98 59.2
Hma1.2p1_1054F.1_g252470 Hydrangea macrophylla HOM05D004277 ORTHO05D005148 2.2e-23 112.8 99 61.6
Nitab4.5_0009962g0020 Nicotiana tabacum HOM05D004277 ORTHO05D005148 1.3e-20 103.6 76 73.7
Pp3c22_19900 Physcomitrium patens HOM05D004277 ORTHO05D005148 1.5e-11 73.6 143 32.9
SEGI_00999 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 7.3e-11 71.2 78 53.8
Mapoly0151s0022 Marchantia polymorpha HOM05D004277 ORTHO05D005148 9.2e-06 54.3 134 27.6


User provided reference genes

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