Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33794 Trifolium pratense HOM05D004902 ORTHO05D006603 1.8e-18 94.7 43 100.0
TPR.G39977 Trifolium pratense HOM05D004902 ORTHO05D006603 1.8e-18 94.7 43 100.0
Ca_14752_v3 Cicer arietinum L. HOM05D004902 ORTHO05D006603 5.2e-18 93.2 43 95.3
Medtr3g052850 Medicago truncatula HOM05D004902 ORTHO05D006603 1.2e-17 92.0 43 95.3
Lj4g0024994 Lotus japonicus HOM05D004902 ORTHO05D006603 5.8e-17 89.7 43 93.0
Phvul.006G046400 Phaseolus vulgaris HOM05D004902 ORTHO05D006603 7.5e-17 89.4 43 93.0
Manes.03G132000 Manihot esculenta HOM05D004902 ORTHO05D006603 1.3e-16 88.6 42 90.5
Hma1.2p1_0036F.1_g023430 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 1.7e-16 88.2 43 88.4
Hma1.2p1_0036F.1_g023440 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 1.7e-16 88.2 43 88.4
Psat5g177120 Pisum sativum HOM05D004902 ORTHO05D006603 1.7e-16 88.2 43 90.7
Glyma.18G093200 Glycine max HOM05D004902 ORTHO05D006603 2.2e-16 87.8 43 90.7
Glyma.18G108300 Glycine max HOM05D004902 ORTHO05D006603 2.2e-16 87.8 43 90.7
Potri.001G267400 Populus trichocarpa HOM05D004902 ORTHO05D006603 2.9e-16 87.4 42 90.5
TWI39G0824 Tripterygium wilfordii HOM05D004902 ORTHO05D006603 2.9e-16 87.4 42 90.5
Atru.chr2.3483 Acer truncatum HOM05D004902 ORTHO05D006603 3.7e-16 87.0 42 90.5
Dinv40776 Davidia involucrata HOM05D004902 ORTHO05D006603 3.7e-16 87.0 43 88.4
Glyma.08G323300 Glycine max HOM05D004902 ORTHO05D006603 3.7e-16 87.0 43 90.7
Oeu062577.2 Olea europaea HOM05D004902 ORTHO05D006603 4.9e-16 86.7 43 86.0
Lalb_Chr10g0107081 Lupinus albus HOM05D004902 ORTHO05D006603 1.1e-15 85.5 42 88.1
arahy.Tifrunner.gnm1.ann1.67NMHM Arachis hypogaea HOM05D004902 ORTHO05D006603 1.4e-15 85.1 42 90.5
arahy.Tifrunner.gnm1.ann1.E3581I Arachis hypogaea HOM05D004902 ORTHO05D006603 1.4e-15 85.1 42 90.5
BcaB06g27301 Brassica carinata HOM05D004902 ORTHO05D006603 1.4e-15 85.1 43 86.0
BcaNung03568 Brassica carinata HOM05D004902 ORTHO05D006603 1.4e-15 85.1 43 86.0
C04p45770 Brassica napus HOM05D004902 ORTHO05D006603 1.4e-15 85.1 43 86.0
BolC4t26162H Brassica oleracea HOM05D004902 ORTHO05D006603 1.4e-15 85.1 43 86.0
COL.COLO4_19537 Corchorus olitorius HOM05D004902 ORTHO05D006603 1.4e-15 85.1 42 88.1
Duzib264G0382 Durio zibethinus HOM05D004902 ORTHO05D006603 1.4e-15 85.1 42 88.1
QL08p009339 Quercus lobata HOM05D004902 ORTHO05D006603 1.4e-15 85.1 42 88.1
Sabra16G0163900 Salix brachista HOM05D004902 ORTHO05D006603 1.4e-15 85.1 42 88.1
TAR362G0117 Trochodendron aralioides HOM05D004902 ORTHO05D006603 1.4e-15 85.1 42 85.7
CSS0000094 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 1.9e-15 84.7 43 83.7
MD03G1198000 Malus domestica HOM05D004902 ORTHO05D006603 1.9e-15 84.7 43 88.4
MD11G1213900 Malus domestica HOM05D004902 ORTHO05D006603 1.9e-15 84.7 43 88.4
Potri.009G061700 Populus trichocarpa HOM05D004902 ORTHO05D006603 1.9e-15 84.7 42 85.7
Prupe.4G217200 Prunus persica HOM05D004902 ORTHO05D006603 1.9e-15 84.7 43 88.4
Sp7g24850 Schrenkiella parvula HOM05D004902 ORTHO05D006603 1.9e-15 84.7 43 86.0
CSS0007833 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 2.4e-15 84.3 43 83.7
Cpa.g.c34168 Carica papaya HOM05D004902 ORTHO05D006603 2.4e-15 84.3 42 90.5
Actinidia10742 Actinidia chinensis HOM05D004902 ORTHO05D006603 3.2e-15 84.0 43 83.7
CiPaw.11G191900 Carya illinoinensis HOM05D004902 ORTHO05D006603 4.1e-15 83.6 42 85.7
ClCG09G010930 Citrullus lanatus HOM05D004902 ORTHO05D006603 4.1e-15 83.6 43 81.4
MELO3C013152.2 Cucumis melo HOM05D004902 ORTHO05D006603 4.1e-15 83.6 43 81.4
CsaV3_7G021940 Cucumis sativus L. HOM05D004902 ORTHO05D006603 4.1e-15 83.6 43 81.4
Sed0009199 Sechium edule HOM05D004902 ORTHO05D006603 4.1e-15 83.6 43 81.4
Solyc07g064810.3 Solanum lycopersicum HOM05D004902 ORTHO05D006603 4.1e-15 83.6 43 83.7
Sopen07g033000 Solanum pennellii HOM05D004902 ORTHO05D006603 4.1e-15 83.6 43 83.7
PGSC0003DMG400022211 Solanum tuberosum HOM05D004902 ORTHO05D006603 4.1e-15 83.6 43 83.7
Thecc.09G123200 Theobroma cacao HOM05D004902 ORTHO05D006603 4.1e-15 83.6 42 85.7
C01p23080 Brassica napus HOM05D004902 ORTHO05D006603 5.4e-15 83.2 43 83.7
BolC1t02242H Brassica oleracea HOM05D004902 ORTHO05D006603 5.4e-15 83.2 43 83.7
AL7G25950 Arabidopsis lyrata HOM05D004902 ORTHO05D006603 7.1e-15 82.8 43 83.7
Carub.0007s1395 Capsella rubella HOM05D004902 ORTHO05D006603 7.1e-15 82.8 43 83.7
Cfa020314 Carpinus fangiana HOM05D004902 ORTHO05D006603 7.1e-15 82.8 42 85.7
Ciclev10007818m.g Citrus clementina HOM05D004902 ORTHO05D006603 7.1e-15 82.8 42 88.1
Haze_09705 Corylus avellana HOM05D004902 ORTHO05D006603 7.1e-15 82.8 42 85.7
Gohir.A11G067600 Gossypium hirsutum HOM05D004902 ORTHO05D006603 7.1e-15 82.8 42 85.7
Gohir.D11G071500 Gossypium hirsutum HOM05D004902 ORTHO05D006603 7.1e-15 82.8 42 85.7
Gorai.007G076800 Gossypium raimondii HOM05D004902 ORTHO05D006603 7.1e-15 82.8 42 85.7
DCAR_022578 Daucus carota HOM05D004902 ORTHO05D006603 9.2e-15 82.4 43 83.7
Gohir.D10G186800 Gossypium hirsutum HOM05D004902 ORTHO05D006603 9.2e-15 82.4 43 83.7
Gorai.011G209600 Gossypium raimondii HOM05D004902 ORTHO05D006603 9.2e-15 82.4 43 83.7
CARHR234510 Cardamine hirsuta HOM05D004902 ORTHO05D006603 1.2e-14 82.0 43 83.7
AT4G26900 Arabidopsis thaliana HOM05D004902 ORTHO05D006603 1.6e-14 81.6 43 81.4
MSTRG.12985 Avicennia marina HOM05D004902 ORTHO05D006603 1.6e-14 81.6 43 81.4
Migut.M01740 Erythranthe guttata HOM05D004902 ORTHO05D006603 1.6e-14 81.6 43 79.1
Lj1A876G36 Lonicera japonica HOM05D004902 ORTHO05D006603 1.6e-14 81.6 43 83.7
Oeu013136.2 Olea europaea HOM05D004902 ORTHO05D006603 2.1e-14 81.3 41 85.4
Peaxi162Scf00235g00424 Petunia axillaris HOM05D004902 ORTHO05D006603 2.1e-14 81.3 42 83.3
GSVIVG01037683001 Vitis vinifera HOM05D004902 ORTHO05D006603 2.1e-14 81.3 42 81.0
Aqoxy5G00324 Aquilegia oxysepala HOM05D004902 ORTHO05D006603 2.7e-14 80.9 42 85.7
FvH4_5g29730 Fragaria vesca HOM05D004902 ORTHO05D006603 3.5e-14 80.5 41 87.8
FAN18G4155 Fragaria x ananassa HOM05D004902 ORTHO05D006603 3.5e-14 80.5 41 87.8
Nitab4.5_0022774g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 4.6e-14 80.1 42 81.0
CAN.G337.72 Capsicum annuum HOM05D004902 ORTHO05D006603 6.0e-14 79.7 42 81.0
Nn8g38868 Nelumbo nucifera HOM05D004902 ORTHO05D006603 6.0e-14 79.7 42 81.0
FAN13G3021 Fragaria x ananassa HOM05D004902 ORTHO05D006603 7.8e-14 79.3 41 87.8
THA.LOC104811618 Tarenaya hassleriana HOM05D004902 ORTHO05D006603 7.8e-14 79.3 43 79.1
MSTRG.14441 Avicennia marina HOM05D004902 ORTHO05D006603 1.0e-13 79.0 43 74.4
PSO210G2842 Papaver somniferum HOM05D004902 ORTHO05D006603 1.3e-13 78.6 41 85.4
PSO832G3378 Papaver somniferum HOM05D004902 ORTHO05D006603 1.3e-13 78.6 41 85.4
SGA_v2.0_scaffold172G39008 Striga asiatica HOM05D004902 ORTHO05D006603 1.3e-13 78.6 42 76.2
ATR0736G184 Amborella trichopoda HOM05D004902 ORTHO05D006603 1.7e-13 78.2 42 76.2
Hund26666 Selenicereus undatus HOM05D004902 ORTHO05D006603 1.7e-13 78.2 43 81.4
Thhalv10024744m.g Eutrema salsugineum HOM05D004902 ORTHO05D006603 2.3e-13 77.8 43 79.1
HanXRQChr08g0233501 Helianthus annuus HOM05D004902 ORTHO05D006603 2.3e-13 77.8 43 79.1
RcHm_v2.0_Chr5g0040671 Rosa chinensis HOM05D004902 ORTHO05D006603 2.3e-13 77.8 41 85.4
ECA246G3742 Erigeron canadensis HOM05D004902 ORTHO05D006603 3.0e-13 77.4 42 83.3
FAN08G0007 Fragaria x ananassa HOM05D004902 ORTHO05D006603 3.0e-13 77.4 41 85.4
Aa31LG3G11010 Aethionema arabicum HOM05D004902 ORTHO05D006603 3.9e-13 77.0 43 76.7
BraA04t16876Z Brassica rapa HOM05D004902 ORTHO05D006603 3.9e-13 77.0 44 79.5
HanXRQChr05g0159411 Helianthus annuus HOM05D004902 ORTHO05D006603 3.9e-13 77.0 43 76.7
A04p12110 Brassica napus HOM05D004902 ORTHO05D006603 5.1e-13 76.6 44 77.3
CANSAT11G1621 Cannabis sativa HOM05D004902 ORTHO05D006603 6.6e-13 76.3 42 81.0
AUR62026758 Chenopodium quinoa HOM05D004902 ORTHO05D006603 6.6e-13 76.3 43 76.7
FAN04G1963 Fragaria x ananassa HOM05D004902 ORTHO05D006603 6.6e-13 76.3 41 85.4
Lsat_1_v5_gn_5_3021 Lactuca sativa HOM05D004902 ORTHO05D006603 8.6e-13 75.9 43 76.7
Rhsim06G0219700 Rhododendron simsii HOM05D004902 ORTHO05D006603 8.6e-13 75.9 42 78.6
Sc02g0003710 Simmondsia chinensis HOM05D004902 ORTHO05D006603 8.6e-13 75.9 43 74.4
Eucgr.F00742 Eucalyptus grandis HOM05D004902 ORTHO05D006603 1.5e-12 75.1 43 69.8
EL10Ac1g01638 Beta vulgaris HOM05D004902 ORTHO05D006603 1.9e-12 74.7 41 78.0
Ah.13g076200 Amaranthus hybridus HOM05D004902 ORTHO05D006603 3.3e-12 73.9 41 78.0
HPP92_013494 Vanilla planifolia HOM05D004902 ORTHO05D006603 3.3e-12 73.9 41 75.6
HPP92_026047 Vanilla planifolia HOM05D004902 ORTHO05D006603 3.3e-12 73.9 41 75.6
vmacro02220 Vaccinium macrocarpon HOM05D004902 ORTHO05D006603 4.3e-12 73.6 42 76.2
CDE02G3624 Ceratophyllum demersum HOM05D004902 ORTHO05D006603 9.5e-12 72.4 41 73.2
CAN.G677.16 Capsicum annuum HOM05D004902 ORTHO05D006603 1.6e-11 71.6 42 73.8
PGR083G1168 Punica granatum HOM05D004902 ORTHO05D006603 1.6e-11 71.6 42 71.4
SEGI_31768 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 2.8e-11 70.9 41 75.6
AagrBONN_evm.TU.Sc2ySwM_117.3547 Anthoceros agrestis HOM05D004902 ORTHO05D006603 5.2e-10 66.6 41 65.9
SMO119G0352 Selaginella moellendorffii HOM05D004902 ORTHO05D006603 1.7e-08 61.6 41 58.5
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 2.2e-08 61.2 36 72.2
Os03g0256400 Oryza sativa ssp. japonica HOM05D004902 ORTHO05D006603 2.9e-08 60.8 37 67.6
Mapoly0071s0086 Marchantia polymorpha HOM05D004902 ORTHO05D006603 4.9e-08 60.1 41 56.1
CBR_g4356 Chara braunii HOM05D004902 ORTHO05D006603 2.4e-07 57.8 41 61.0
Pp3c1_20280 Physcomitrium patens HOM05D004902 ORTHO05D006603 7.1e-07 56.2 37 64.9


User provided reference genes

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