Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39963 Trifolium pratense HOM05D004225 ORTHO05D004728 6.5e-157 557.4 288 100.0
Medtr7g086050 Medicago truncatula HOM05D004225 ORTHO05D004728 4.9e-128 461.5 289 85.1
Ca_08286_v3 Cicer arietinum L. HOM05D004225 ORTHO05D004728 5.6e-124 448.0 286 83.6
Glyma.19G113700 Glycine max HOM05D004225 ORTHO05D004728 4.3e-116 421.8 286 79.4
Phvul.001G113200 Phaseolus vulgaris HOM05D004225 ORTHO05D004728 1.2e-115 420.2 288 78.5
VMungo1383G3152 Vigna mungo HOM05D004225 ORTHO05D004728 4.2e-111 405.2 287 76.3
Lj1g0011347 Lotus japonicus HOM05D004225 ORTHO05D004728 6.0e-110 401.4 287 74.9
Psat3g087760 Pisum sativum HOM05D004225 ORTHO05D004728 1.3e-107 393.7 246 86.2
Lalb_Chr14g0364611 Lupinus albus HOM05D004225 ORTHO05D004728 2.7e-102 375.9 285 73.0
arahy.Tifrunner.gnm1.ann1.MX8T8B Arachis hypogaea HOM05D004225 ORTHO05D004728 5.6e-100 368.2 289 70.6
arahy.Tifrunner.gnm1.ann1.4I2AVL Arachis hypogaea HOM05D004225 ORTHO05D004728 6.2e-99 364.8 289 69.9
Glyma.16G038900 Glycine max HOM05D004225 ORTHO05D004728 1.2e-81 307.4 216 77.8
QL07p018789 Quercus lobata HOM05D004225 ORTHO05D004728 2.9e-80 302.8 287 59.9
Actinidia03947 Actinidia chinensis HOM05D004225 ORTHO05D004728 3.8e-80 302.4 286 60.1
Duzib128G0769 Durio zibethinus HOM05D004225 ORTHO05D004728 3.8e-80 302.4 289 61.2
Thecc.05G246800 Theobroma cacao HOM05D004225 ORTHO05D004728 3.8e-80 302.4 287 58.9
Cpa.g.sc161.2 Carica papaya HOM05D004225 ORTHO05D004728 5.0e-80 302.0 284 60.2
Ciclev10018636m.g Citrus clementina HOM05D004225 ORTHO05D004728 5.0e-80 302.0 286 60.8
Rhsim03G0054800 Rhododendron simsii HOM05D004225 ORTHO05D004728 1.1e-79 300.8 286 60.8
COL.COLO4_32974 Corchorus olitorius HOM05D004225 ORTHO05D004728 3.2e-79 299.3 286 58.0
Potri.013G055300 Populus trichocarpa HOM05D004225 ORTHO05D004728 2.1e-78 296.6 283 58.3
Atru.chr2.1407 Acer truncatum HOM05D004225 ORTHO05D004728 1.0e-77 294.3 287 59.6
Gohir.A11G233000 Gossypium hirsutum HOM05D004225 ORTHO05D004728 1.0e-77 294.3 286 56.6
Cfa017675 Carpinus fangiana HOM05D004225 ORTHO05D004728 1.3e-77 293.9 288 59.4
Duzib177G1146 Durio zibethinus HOM05D004225 ORTHO05D004728 2.3e-77 293.1 287 58.5
Sabra13G0049600 Salix brachista HOM05D004225 ORTHO05D004728 2.3e-77 293.1 264 59.5
GSVIVG01022462001 Vitis vinifera HOM05D004225 ORTHO05D004728 3.9e-77 292.4 262 63.0
Haze_20474 Corylus avellana HOM05D004225 ORTHO05D004728 1.1e-76 290.8 288 59.4
Actinidia37791 Actinidia chinensis HOM05D004225 ORTHO05D004728 1.5e-76 290.4 287 59.6
CANSAT78G2348 Cannabis sativa HOM05D004225 ORTHO05D004728 1.5e-76 290.4 286 55.9
MD12G1006900 Malus domestica HOM05D004225 ORTHO05D004728 1.9e-76 290.0 257 62.3
Dinv25097 Davidia involucrata HOM05D004225 ORTHO05D004728 9.7e-76 287.7 263 60.5
CiPaw.10G126100 Carya illinoinensis HOM05D004225 ORTHO05D004728 2.2e-75 286.6 288 58.7
Gohir.D11G244200 Gossypium hirsutum HOM05D004225 ORTHO05D004728 2.2e-75 286.6 286 55.9
Manes.09G139100 Manihot esculenta HOM05D004225 ORTHO05D004728 2.2e-75 286.6 287 58.5
Gorai.007G259700 Gossypium raimondii HOM05D004225 ORTHO05D004728 6.3e-75 285.0 287 56.4
MD14G1004600 Malus domestica HOM05D004225 ORTHO05D004728 1.4e-74 283.9 284 57.0
vmacro07548 Vaccinium macrocarpon HOM05D004225 ORTHO05D004728 1.8e-74 283.5 284 58.1
Prupe.7G007400 Prunus persica HOM05D004225 ORTHO05D004728 1.0e-72 277.7 282 57.1
MSTRG.5924 Avicennia marina HOM05D004225 ORTHO05D004728 2.2e-72 276.6 259 61.0
Cc06_g07240 Coffea canephora HOM05D004225 ORTHO05D004728 5.0e-72 275.4 225 67.1
Nitab4.5_0001355g0010 Nicotiana tabacum HOM05D004225 ORTHO05D004728 1.4e-71 273.9 243 62.1
Nitab4.5_0022463g0010 Nicotiana tabacum HOM05D004225 ORTHO05D004728 1.4e-71 273.9 243 61.7
Migut.J00760 Erythranthe guttata HOM05D004225 ORTHO05D004728 5.5e-71 271.9 257 58.8
ClCG02G007850 Citrullus lanatus HOM05D004225 ORTHO05D004728 3.6e-70 269.2 293 54.6
Peaxi162Scf00061g00247 Petunia axillaris HOM05D004225 ORTHO05D004728 4.6e-70 268.9 269 58.7
Sp3g02770 Schrenkiella parvula HOM05D004225 ORTHO05D004728 6.7e-69 265.0 236 61.0
Lj2A418T70 Lonicera japonica HOM05D004225 ORTHO05D004728 1.1e-68 264.2 245 60.4
BraA05t23099Z Brassica rapa HOM05D004225 ORTHO05D004728 2.0e-68 263.5 274 55.8
BcaC05g30250 Brassica carinata HOM05D004225 ORTHO05D004728 2.6e-68 263.1 292 53.1
C05p63190 Brassica napus HOM05D004225 ORTHO05D004728 4.4e-68 262.3 241 61.8
Aa31LG5G14340 Aethionema arabicum HOM05D004225 ORTHO05D004728 5.7e-68 261.9 252 58.3
EL10Ac5g11767 Beta vulgaris HOM05D004225 ORTHO05D004728 5.7e-68 261.9 263 56.7
RcHm_v2.0_Chr3g0496671 Rosa chinensis HOM05D004225 ORTHO05D004728 1.7e-67 260.4 220 64.1
Thhalv10019953m.g Eutrema salsugineum HOM05D004225 ORTHO05D004728 2.2e-67 260.0 239 59.4
BcaC05g30283 Brassica carinata HOM05D004225 ORTHO05D004728 6.3e-67 258.5 231 60.6
AT3G03790 Arabidopsis thaliana HOM05D004225 ORTHO05D004728 8.2e-67 258.1 239 59.4
Ah.12g059700 Amaranthus hybridus HOM05D004225 ORTHO05D004728 1.4e-66 257.3 230 62.2
MBI11_g07706_MAGBIO Magnolia biondii HOM05D004225 ORTHO05D004728 1.4e-66 257.3 290 53.8
A05p43600 Brassica napus HOM05D004225 ORTHO05D004728 2.4e-66 256.5 292 52.4
Sed0003216 Sechium edule HOM05D004225 ORTHO05D004728 3.1e-66 256.1 294 53.4
MELO3C024751.2 Cucumis melo HOM05D004225 ORTHO05D004728 5.3e-66 255.4 293 52.6
CsaV3_2G035890 Cucumis sativus L. HOM05D004225 ORTHO05D004728 6.9e-66 255.0 292 52.1
Hund10817 Selenicereus undatus HOM05D004225 ORTHO05D004728 6.9e-66 255.0 284 52.8
TWI32G0579 Tripterygium wilfordii HOM05D004225 ORTHO05D004728 6.9e-66 255.0 285 54.4
Eucgr.A02119 Eucalyptus grandis HOM05D004225 ORTHO05D004728 9.1e-66 254.6 230 60.0
ECA238G0084 Erigeron canadensis HOM05D004225 ORTHO05D004728 1.2e-65 254.2 231 60.6
TWI60G0668 Tripterygium wilfordii HOM05D004225 ORTHO05D004728 1.5e-65 253.8 265 57.0
Aqoxy1G00553 Aquilegia oxysepala HOM05D004225 ORTHO05D004728 2.6e-65 253.1 270 55.9
BcaC05g29906 Brassica carinata HOM05D004225 ORTHO05D004728 2.6e-65 253.1 240 61.2
TAR633G0301 Trochodendron aralioides HOM05D004225 ORTHO05D004728 3.4e-65 252.7 269 53.9
BolC5t34981H Brassica oleracea HOM05D004225 ORTHO05D004728 5.9e-65 251.9 239 61.5
CARHR077860 Cardamine hirsuta HOM05D004225 ORTHO05D004728 7.7e-65 251.5 286 51.7
AL3G13620 Arabidopsis lyrata HOM05D004225 ORTHO05D004728 1.3e-64 250.8 238 58.4
THA.LOC104820785 Tarenaya hassleriana HOM05D004225 ORTHO05D004728 1.7e-64 250.4 255 57.3
Sc01g0005150 Simmondsia chinensis HOM05D004225 ORTHO05D004728 5.0e-64 248.8 255 55.7
SalBow3G0054 Salvia bowleyana HOM05D004225 ORTHO05D004728 1.4e-63 247.3 230 61.3
PGSC0003DMG400005593 Solanum tuberosum HOM05D004225 ORTHO05D004728 1.9e-63 246.9 220 60.9
FvH4_1g28360 Fragaria vesca HOM05D004225 ORTHO05D004728 9.4e-63 244.6 239 59.0
PGR042G0202 Punica granatum HOM05D004225 ORTHO05D004728 9.4e-63 244.6 276 55.1
CAN.G170.116 Capsicum annuum HOM05D004225 ORTHO05D004728 1.2e-62 244.2 258 54.3
AUR62039726 Chenopodium quinoa HOM05D004225 ORTHO05D004728 2.1e-62 243.4 216 62.0
FAN23G2269 Fragaria x ananassa HOM05D004225 ORTHO05D004728 2.1e-62 243.4 239 59.4
FAN26G1663 Fragaria x ananassa HOM05D004225 ORTHO05D004728 4.7e-62 242.3 239 59.0
FAN19G2926 Fragaria x ananassa HOM05D000495 ORTHO05D004728 1.8e-61 240.4 240 57.9
Sopen01g020500 Solanum pennellii HOM05D004225 ORTHO05D004728 1.8e-61 240.4 243 55.1
Solyc01g056570.3 Solanum lycopersicum HOM05D004225 ORTHO05D004728 3.0e-61 239.6 243 55.1
CSS0022490 Camellia sinensis var. sinensis HOM05D004225 ORTHO05D004728 2.0e-60 236.9 179 67.6
SGA_v2.0_scaffold112G31648 Striga asiatica HOM05D004225 ORTHO05D004728 4.4e-60 235.7 206 62.6
Carub.0003s0296 Capsella rubella HOM05D004225 ORTHO05D004728 7.4e-60 235.0 288 48.3
CSS0005542 Camellia sinensis var. sinensis HOM05D004225 ORTHO05D004728 3.7e-59 232.6 267 51.7
Lsat_1_v5_gn_2_103941 Lactuca sativa HOM05D004225 ORTHO05D004728 3.7e-59 232.6 223 59.2
DCAR_020662 Daucus carota HOM05D004225 ORTHO05D004728 9.1e-58 228.0 303 48.5
HanXRQChr14g0453121 Helianthus annuus HOM05D004225 ORTHO05D004728 5.9e-57 225.3 210 59.0
Nn2g14481 Nelumbo nucifera HOM05D004225 ORTHO05D004728 1.9e-55 220.3 290 48.3
Gohir.A13G165100 Gossypium hirsutum HOM05D004225 ORTHO05D004728 2.1e-54 216.9 288 47.6
PSO339G3394 Papaver somniferum HOM05D004225 ORTHO05D004728 1.2e-52 211.1 298 46.6
PSO384G1703 Papaver somniferum HOM05D004225 ORTHO05D004728 1.2e-52 211.1 274 48.9
unitig_27.g24735 Utricularia gibba HOM05D004225 ORTHO05D004728 3.7e-51 206.1 291 46.7
Zm00001eb300770 Zea mays HOM05D004225 ORTHO05D004728 3.7e-51 206.1 243 51.4
AUR62036278 Chenopodium quinoa HOM05D004225 ORTHO05D004728 8.2e-51 204.9 175 62.9
HPP92_028052 Vanilla planifolia HOM05D004225 ORTHO05D004728 8.2e-51 204.9 290 47.2
ATR0697G085 Amborella trichopoda HOM05D004225 ORTHO05D004728 7.7e-49 198.4 223 56.5
SHI13905 Sapria himalayana HOM05D004225 ORTHO05D004728 5.2e-45 185.7 252 45.6
Gorai.013G194200 Gossypium raimondii HOM05D004225 ORTHO05D004728 1.0e-40 171.4 209 53.1
Oeu029553.1 Olea europaea HOM05D004225 ORTHO05D004728 2.9e-40 169.9 189 51.3
Gohir.D13G168000 Gossypium hirsutum HOM05D004225 ORTHO05D004728 4.7e-38 162.5 264 44.7
SEGI_41481 Sequoiadendron giganteum HOM05D004225 ORTHO05D004728 2.0e-33 147.1 301 38.5
Mapoly0082s0025 Marchantia polymorpha HOM05D004225 ORTHO05D004728 2.1e-30 137.1 237 43.0
Gohir.A11G205501 Gossypium hirsutum HOM05D000558 ORTHO05D001857 1.8e-26 124.0 121 61.2
SMO367G1027 Selaginella moellendorffii HOM05D004225 ORTHO05D004728 5.9e-25 119.0 254 36.2
Pp3c8_24330 Physcomitrium patens HOM05D004225 ORTHO05D004728 1.0e-24 118.2 317 34.4
AagrBONN_evm.TU.Sc2ySwM_228.1834 Anthoceros agrestis HOM05D004225 ORTHO05D004728 1.2e-14 84.7 233 33.9


User provided reference genes

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