Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39946 Trifolium pratense HOM05D002090 ORTHO05D001923 2.8e-117 425.2 206 100.0
TPR.G37532 Trifolium pratense HOM05D002090 ORTHO05D001923 2.1e-72 276.2 206 63.6
TPR.G21912 Trifolium pratense HOM05D000096 ORTHO05D000045 8.7e-71 270.8 202 63.4
TPR.G626 Trifolium pratense HOM05D002090 ORTHO05D001923 1.0e-55 220.7 198 50.5
TPR.G17441 Trifolium pratense HOM05D002090 ORTHO05D001923 3.3e-54 215.7 148 67.6
TPR.G27405 Trifolium pratense HOM05D002090 ORTHO05D001923 3.6e-48 195.7 203 55.2
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 1.2e-40 170.6 184 44.0
Medtr5g041170 Medicago truncatula HOM05D002090 ORTHO05D001923 1.2e-40 170.6 184 44.0
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 7.5e-38 161.4 159 45.3
TPR.G17007 Trifolium pratense HOM05D002090 ORTHO05D001923 5.9e-35 151.8 89 73.0
Medtr0003s0290 Medicago truncatula HOM05D002090 ORTHO05D001923 2.5e-33 146.4 173 40.5
Psat1g003680 Pisum sativum HOM05D002090 ORTHO05D001923 2.8e-32 142.9 202 35.6
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 6.8e-31 138.3 190 37.9
Psat1g020520 Pisum sativum HOM05D012348 ORTHO05D012889 8.9e-31 137.9 129 45.7
TPR.G7353 Trifolium pratense HOM05D002090 ORTHO05D001923 1.4e-28 130.6 200 37.0
Medtr7g450880 Medicago truncatula HOM05D002090 ORTHO05D001923 1.8e-28 130.2 158 43.0
TPR.G13259 Trifolium pratense HOM05D002090 ORTHO05D001923 5.4e-28 128.6 200 36.0
Lalb_Chr02g0157091 Lupinus albus HOM05D002090 ORTHO05D001923 6.6e-26 121.7 197 35.0
Medtr5g053590 Medicago truncatula HOM05D002090 ORTHO05D001923 9.5e-25 117.9 164 37.8
TPR.G15924 Trifolium pratense HOM05D000096 ORTHO05D000045 2.8e-24 116.3 174 35.1
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 1.0e-23 114.4 150 37.3
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 1.8e-23 113.6 151 39.1
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 6.8e-23 111.7 167 35.9
Medtr1g043690 Medicago truncatula HOM05D002090 ORTHO05D001923 8.9e-23 111.3 191 38.2
Lalb_Chr06g0171231 Lupinus albus HOM05D002090 ORTHO05D001923 7.5e-22 108.2 141 40.4
Lalb_Chr25g0280991 Lupinus albus HOM05D002090 ORTHO05D001923 9.8e-22 107.8 146 34.9
Medtr4g085760 Medicago truncatula HOM05D002090 ORTHO05D001923 1.3e-18 97.4 155 31.6
TPR.G35804 Trifolium pratense HOM05D002090 ORTHO05D001923 3.0e-18 96.3 74 63.5
TPR.G7359 Trifolium pratense HOM05D002090 ORTHO05D001923 3.0e-18 96.3 74 63.5
Psat1g120640 Pisum sativum HOM05D002090 ORTHO05D015180 3.9e-18 95.9 194 31.4
Psat5g186520 Pisum sativum HOM05D002090 ORTHO05D001923 1.9e-17 93.6 92 43.5
Psat5g067440 Pisum sativum HOM05D002090 ORTHO05D001923 2.5e-17 93.2 105 39.0
Glyma.09G126850 Glycine max HOM05D002090 ORTHO05D001923 7.3e-17 91.7 191 33.0
Medtr1g062890 Medicago truncatula HOM05D002090 ORTHO05D001923 9.5e-17 91.3 186 32.8
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 1.2e-16 90.9 155 32.9
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 1.6e-16 90.5 186 29.0
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 1.6e-16 90.5 175 28.0
TPR.G19292 Trifolium pratense HOM05D002090 ORTHO05D001923 4.7e-16 89.0 205 29.8
Medtr8g469790 Medicago truncatula HOM05D000014 ORTHO05D000016 6.2e-16 88.6 139 33.8
Glyma.06G126350 Glycine max HOM05D002090 ORTHO05D001923 1.8e-15 87.0 193 29.5
Glyma.17G216450 Glycine max HOM05D002090 ORTHO05D001923 1.8e-15 87.0 186 28.5
TPR.G8108 Trifolium pratense HOM05D000096 ORTHO05D000045 1.8e-15 87.0 116 36.2
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 3.1e-15 86.3 186 28.0
Glyma.04G181700 Glycine max HOM05D002090 ORTHO05D001923 4.0e-15 85.9 165 27.3
Glyma.11G178600 Glycine max HOM05D002090 ORTHO05D001923 5.2e-15 85.5 175 26.3
Lj3g0021994 Lotus japonicus HOM05D002090 ORTHO05D001923 1.2e-14 84.3 137 33.6
Medtr3g055660 Medicago truncatula HOM05D002090 ORTHO05D001923 2.6e-14 83.2 180 27.2
TPR.G10894 Trifolium pratense HOM05D002090 ORTHO05D001923 2.6e-14 83.2 86 48.8
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 4.4e-14 82.4 175 27.4
Glyma.15G235800 Glycine max HOM05D002090 ORTHO05D001923 4.4e-14 82.4 163 28.2
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 4.4e-14 82.4 93 39.8
Medtr4g014890 Medicago truncatula HOM05D002090 ORTHO05D001923 5.8e-14 82.0 180 27.2
TPR.G39328 Trifolium pratense HOM05D002090 ORTHO05D001923 9.8e-14 81.3 88 39.8
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 1.3e-13 80.9 186 28.5
Lalb_Chr05g0225681 Lupinus albus HOM05D002090 ORTHO05D001923 1.3e-13 80.9 120 35.0
Glyma.18G142200 Glycine max HOM05D002090 ORTHO05D001923 2.2e-13 80.1 177 27.7
Glyma.16G114500 Glycine max HOM05D002090 ORTHO05D001923 2.9e-13 79.7 125 32.0
Lalb_Chr13g0293791 Lupinus albus HOM05D002090 ORTHO05D001923 8.3e-13 78.2 82 39.0
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 1.4e-12 77.4 193 27.5
Lalb_Chr11g0072781 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-12 76.6 100 35.0
Glyma.08G253400 Glycine max HOM05D002090 ORTHO05D001923 3.2e-12 76.3 175 25.7
Glyma.13G028600 Glycine max HOM05D002090 ORTHO05D001923 1.2e-11 74.3 187 26.2
Glyma.05G078700 Glycine max HOM05D002090 ORTHO05D001923 1.6e-11 73.9 122 29.5
Medtr6g059860 Medicago truncatula HOM05D002090 ORTHO05D001923 1.6e-11 73.9 180 26.1
Glyma.13G025000 Glycine max HOM05D002090 ORTHO05D001923 2.0e-11 73.6 186 26.9
Psat1g188080 Pisum sativum HOM05D002090 ORTHO05D001923 2.0e-11 73.6 96 39.6
TPR.G27142 Trifolium pratense HOM05D002090 ORTHO05D001923 2.7e-11 73.2 97 38.1
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 3.5e-11 72.8 177 26.0
Medtr6g055250 Medicago truncatula HOM05D002090 ORTHO05D001923 3.5e-11 72.8 95 44.2
Glyma.16G116932 Glycine max HOM05D002090 ORTHO05D001923 4.6e-11 72.4 111 28.8
TPR.G25717 Trifolium pratense HOM05D002090 ORTHO05D001923 1.0e-10 71.2 117 36.8
Glyma.20G069000 Glycine max HOM05D017635 ORTHO05D014779 1.3e-10 70.9 156 27.6
Psat2g112720 Pisum sativum HOM05D002090 ORTHO05D001923 1.7e-10 70.5 77 33.8
Psat7g184560 Pisum sativum HOM05D002090 ORTHO05D001923 6.6e-10 68.6 70 42.9
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 8.6e-10 68.2 187 24.1
Glyma.20G065700 Glycine max HOM05D002090 ORTHO05D001923 8.6e-10 68.2 157 24.2
Medtr2g021620 Medicago truncatula HOM05D040056 ORTHO05D025862 3.3e-09 66.2 88 36.4
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.3e-09 65.9 174 26.4
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-08 64.3 215 22.3
Psat6g105800 Pisum sativum HOM05D002090 ORTHO05D001923 1.2e-08 64.3 86 37.2
Glyma.07G223800 Glycine max HOM05D002090 ORTHO05D001923 1.6e-08 63.9 204 26.0
TPR.G150 Trifolium pratense HOM05D002090 ORTHO05D026072 1.6e-08 63.9 64 46.9
TPR.G26860 Trifolium pratense HOM05D002090 ORTHO05D001923 1.6e-08 63.9 93 33.3
Ca_22739_v3 Cicer arietinum L. HOM05D002090 ORTHO05D001923 6.2e-08 62.0 93 34.4
Glyma.02G161500 Glycine max HOM05D002090 ORTHO05D001923 6.2e-08 62.0 139 28.8
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 8.1e-08 61.6 77 40.3
Psat5g037600 Pisum sativum HOM05D000096 ORTHO05D000045 8.1e-08 61.6 120 30.0
DCAR_031560 Daucus carota HOM05D002907 ORTHO05D014614 1.1e-07 61.2 148 31.1
ECA240G4108 Erigeron canadensis HOM05D003964 ORTHO05D002376 1.1e-07 61.2 205 24.9
arahy.Tifrunner.gnm1.ann1.CIC8LF Arachis hypogaea HOM05D002441 ORTHO05D002376 1.4e-07 60.8 104 31.7
ECA246G2956 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.4e-07 60.8 164 23.8
Nitab4.5_0000992g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-07 60.8 126 29.4
BraA05t19978Z Brassica rapa HOM05D000313 ORTHO05D000065 1.8e-07 60.5 105 28.6
TPR.G39339 Trifolium pratense HOM05D002090 ORTHO05D001923 3.1e-07 59.7 39 74.4
ECA236G2182 Erigeron canadensis HOM05D000353 ORTHO05D000174 4.0e-07 59.3 175 24.0
Psat5g183760 Pisum sativum HOM05D015378 ORTHO05D015180 4.0e-07 59.3 87 33.3
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 6.8e-07 58.5 116 28.4
ECA240G1473 Erigeron canadensis HOM05D000353 ORTHO05D000174 6.8e-07 58.5 175 24.0
arahy.Tifrunner.gnm1.ann1.8J8DAZ Arachis hypogaea HOM05D002441 ORTHO05D002376 8.9e-07 58.2 116 28.4
BcaC04g19486 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-07 58.2 102 29.4
C09p55230 Brassica napus HOM05D000313 ORTHO05D000065 8.9e-07 58.2 102 29.4
Glyma.05G084800 Glycine max HOM05D002090 ORTHO05D001923 8.9e-07 58.2 93 30.1
ECA233G5850 Erigeron canadensis HOM05D003964 ORTHO05D002376 2.0e-06 57.0 161 23.6
Lj4g0014236 Lotus japonicus HOM05D002090 ORTHO05D020767 4.4e-06 55.8 76 36.8
Psat1g008280 Pisum sativum HOM05D002090 ORTHO05D001923 4.4e-06 55.8 87 33.3
Sp1g26390 Schrenkiella parvula HOM05D000305 ORTHO05D000065 4.4e-06 55.8 125 32.0
Sp2g06320 Schrenkiella parvula HOM05D000305 ORTHO05D000065 4.4e-06 55.8 125 32.0
BcaC03g14374 Brassica carinata HOM05D000305 ORTHO05D000065 5.8e-06 55.5 83 33.7
C06p53880 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-06 55.5 83 33.7
Sp3g26560 Schrenkiella parvula HOM05D000305 ORTHO05D000065 5.8e-06 55.5 102 36.3
TPR.G15265 Trifolium pratense HOM05D002090 ORTHO05D001923 5.8e-06 55.5 76 31.6
TPR.G19290 Trifolium pratense HOM05D002090 ORTHO05D001923 5.8e-06 55.5 61 42.6
TPR.G21729 Trifolium pratense HOM05D003813 ORTHO05D004557 5.8e-06 55.5 148 29.1
C02p26880 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-06 55.1 101 28.7
Glyma.14G126950 Glycine max HOM05D017635 ORTHO05D014779 7.5e-06 55.1 115 29.6
Glyma.16G086900 Glycine max HOM05D021961 ORTHO05D014779 7.5e-06 55.1 81 34.6
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 9.9e-06 54.7 139 26.6


User provided reference genes

Program Settings