Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 3.5e-62 241.5 126 100.0
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 7.3e-52 207.2 126 82.5
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 8.9e-50 200.3 126 79.4
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 1.5e-49 199.5 125 80.0
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 7.5e-49 197.2 126 80.2
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 3.2e-47 191.8 126 74.6
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 9.2e-47 190.3 126 77.0
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 8.6e-45 183.7 125 73.6
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 2.5e-44 182.2 125 73.6
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 1.2e-43 179.9 126 69.8
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 8.1e-43 177.2 120 72.5
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.4e-42 176.4 126 68.3
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.8e-42 176.0 120 71.7
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 5.8e-41 171.0 124 69.4
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 1.3e-40 169.9 123 66.7
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 2.2e-40 169.1 124 68.5
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 1.1e-39 166.8 125 64.8
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 3.2e-39 165.2 123 67.5
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 4.1e-39 164.9 121 66.9
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 9.2e-39 163.7 120 65.8
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 2.1e-38 162.5 126 63.5
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 2.1e-38 162.5 122 66.4
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 4.6e-38 161.4 122 65.6
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 4.6e-38 161.4 122 65.6
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 4.6e-38 161.4 122 65.6
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 1.0e-37 160.2 126 61.9
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.0e-37 160.2 122 64.8
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.0e-37 160.2 122 64.8
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.3e-37 159.1 122 64.8
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 3.0e-37 158.7 122 65.6
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 3.0e-37 158.7 126 65.1
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 3.9e-37 158.3 122 65.6
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 5.1e-37 157.9 122 63.9
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 1.5e-36 156.4 119 67.2
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 2.5e-36 155.6 117 67.5
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.2e-35 153.3 132 59.8
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.2e-35 153.3 126 61.1
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 8.1e-35 150.6 126 59.5
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.8e-34 149.4 126 59.5
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 3.1e-34 148.7 159 53.5
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.0e-34 148.3 119 59.7
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 4.0e-34 148.3 112 65.2
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 2.6e-33 145.6 90 78.9
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 9.9e-33 143.7 119 58.0
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 1.7e-32 142.9 111 62.2
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 2.9e-32 142.1 123 58.5
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 2.9e-32 142.1 126 56.3
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 3.7e-32 141.7 126 54.8
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 6.4e-32 141.0 126 57.1
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 1.1e-31 140.2 96 72.9
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 1.9e-31 139.4 122 59.0
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 2.4e-31 139.0 126 56.3
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 5.4e-31 137.9 114 59.6
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 1.2e-30 136.7 115 56.5
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 2.1e-30 136.0 124 55.6
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 2.7e-30 135.6 154 48.7
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 2.7e-30 135.6 126 54.8
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 3.5e-30 135.2 120 58.3
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 3.5e-30 135.2 116 57.8
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 3.5e-30 135.2 111 56.8
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 7.8e-30 134.0 118 54.2
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.7e-29 132.9 115 54.8
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 2.3e-29 132.5 114 57.9
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 3.9e-29 131.7 115 54.8
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 5.1e-29 131.3 122 51.6
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 5.1e-29 131.3 122 51.6
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 6.6e-29 131.0 115 53.9
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 6.6e-29 131.0 115 53.9
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.1e-28 130.2 88 70.5
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 2.5e-28 129.0 122 52.5
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 3.3e-28 128.6 122 51.6
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 5.6e-28 127.9 124 55.6
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 5.6e-28 127.9 120 52.5
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 9.6e-28 127.1 115 55.7
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 1.6e-27 126.3 104 55.8
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 2.1e-27 125.9 117 52.1
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 2.1e-27 125.9 123 50.4
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 2.1e-27 125.9 110 55.5
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 2.8e-27 125.6 110 55.5
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 4.7e-27 124.8 115 52.2
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 8.1e-27 124.0 110 56.4
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 8.1e-27 124.0 110 56.4
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.1e-26 123.6 124 49.2
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 1.1e-26 123.6 86 68.6
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.1e-26 123.6 126 50.0
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 1.4e-26 123.2 114 56.1
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.4e-26 123.2 115 50.4
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 1.8e-26 122.9 83 74.7
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 3.1e-26 122.1 116 51.7
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 4.0e-26 121.7 122 50.8
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 6.8e-26 120.9 122 49.2
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 8.9e-26 120.6 107 57.0
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 1.2e-25 120.2 117 53.8
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 3.4e-25 118.6 92 59.8
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 3.4e-25 118.6 132 49.2
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.1e-23 113.6 107 55.1
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 3.5e-22 108.6 195 36.4
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 6.0e-22 107.8 91 56.0
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 6.0e-22 107.8 91 56.0
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.0e-21 107.1 91 54.9
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 6.6e-21 104.4 86 58.1
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 1.5e-20 103.2 87 59.8
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.5e-20 103.2 122 39.3
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 6.2e-19 97.8 89 55.1
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 5.3e-18 94.7 110 44.5
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 3.4e-17 92.0 100 48.0
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 1.3e-13 80.1 86 48.8
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 1.5e-09 66.6 76 38.2


User provided reference genes

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