Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3990 Trifolium pratense HOM05D009458 ORTHO05D014663 2.9e-106 388.7 209 100.0
TPR.G17486 Trifolium pratense HOM05D009458 ORTHO05D012015 2.3e-74 282.7 210 72.4
TPR.G14662 Trifolium pratense HOM05D009458 ORTHO05D014663 5.4e-52 208.4 128 82.0
TPR.G7261 Trifolium pratense HOM05D009458 ORTHO05D014663 1.1e-44 184.1 94 95.7
Medtr0337s0060 Medicago truncatula HOM05D009458 ORTHO05D014663 1.5e-41 173.7 153 61.4
Medtr6g090505 Medicago truncatula HOM05D009458 ORTHO05D012015 1.9e-33 146.7 278 39.6
TPR.G15904 Trifolium pratense HOM05D009458 ORTHO05D014663 8.7e-26 121.3 158 53.8
TPR.G8434 Trifolium pratense HOM05D009458 ORTHO05D012015 9.6e-25 117.9 59 96.6
Medtr8g446020 Medicago truncatula HOM05D009458 ORTHO05D012015 9.0e-23 111.3 59 89.8
Medtr0558s0020 Medicago truncatula HOM05D009458 ORTHO05D012015 4.5e-22 109.0 59 86.4
Medtr1g083640 Medicago truncatula HOM05D009458 ORTHO05D012015 3.3e-17 92.8 52 84.6
TPR.G32978 Trifolium pratense HOM05D009458 ORTHO05D012015 6.5e-13 78.6 43 81.4
Medtr0337s0040 Medicago truncatula HOM05D009458 ORTHO05D012015 4.6e-11 72.4 42 81.0
Duzib147G0739 Durio zibethinus HOM05D000045 ORTHO05D000067 3.9e-10 69.3 58 56.9
FvH4_3g31442 Fragaria vesca HOM05D000045 ORTHO05D000067 2.5e-09 66.6 59 45.8
Ciclev10014295m.g Citrus clementina HOM05D000045 ORTHO05D000067 7.4e-09 65.1 58 50.0
Gohir.A09G032100 Gossypium hirsutum HOM05D000045 ORTHO05D000067 1.6e-08 63.9 58 50.0
QL02p073271 Quercus lobata HOM05D000045 ORTHO05D000067 2.2e-08 63.5 58 46.6
TPR.G36305 Trifolium pratense HOM05D009458 ORTHO05D012015 2.2e-08 63.5 32 93.8
Manes.15G155500 Manihot esculenta HOM05D000045 ORTHO05D000067 3.7e-08 62.8 58 44.8
Rhsim02G0129500 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.7e-08 62.8 168 26.2
Gohir.D09G032200 Gossypium hirsutum HOM05D000045 ORTHO05D000067 4.8e-08 62.4 57 49.1
Gorai.006G037100 Gossypium raimondii HOM05D000045 ORTHO05D000067 4.8e-08 62.4 57 49.1
TPR.G38439 Trifolium pratense HOM05D000045 ORTHO05D000067 4.8e-08 62.4 58 44.8
Thecc.04G026200 Theobroma cacao HOM05D000045 ORTHO05D000067 1.1e-07 61.2 58 48.3
TPR.G34286 Trifolium pratense HOM05D000045 ORTHO05D000067 1.4e-07 60.8 58 46.6
EL10Ac1g01868 Beta vulgaris HOM05D000045 ORTHO05D000067 1.8e-07 60.5 58 44.8
CiPaw.09G035500 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.8e-07 60.5 58 48.3
CSS0002394 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-07 60.1 58 44.8
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-07 60.1 58 44.8
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-07 60.1 58 44.8
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-07 60.1 58 44.8
TWI73G1051 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.4e-07 60.1 58 48.3
CSS0023299 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.1e-07 59.7 76 40.8
FvH4_4g06832 Fragaria vesca HOM05D000045 ORTHO05D000067 4.1e-07 59.3 44 54.5
FvH4_4g12203 Fragaria vesca HOM05D000045 ORTHO05D000067 4.1e-07 59.3 51 45.1
Os04g0421700 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 5.3e-07 58.9 58 43.1
CiPaw.04G032300 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.9e-07 58.5 58 46.6
TWI34G0182 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.9e-07 58.5 58 48.3
TPR.G9806 Trifolium pratense HOM05D000045 ORTHO05D000067 9.0e-07 58.2 58 41.4
TWI63G0390 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.0e-07 58.2 58 46.6
Atru.chr8.1689 Acer truncatum HOM05D000045 ORTHO05D000067 1.2e-06 57.8 58 43.1
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-06 57.8 58 44.8
TWI34G1161 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-06 57.8 58 48.3
TAR515G0003 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.2e-06 57.8 56 48.2
CSS0020853 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-06 57.4 58 41.4
Peaxi162Scf01514g00020 Petunia axillaris HOM05D000045 ORTHO05D000067 1.5e-06 57.4 58 44.8
Rhsim11G0165300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.5e-06 57.4 58 44.8
Actinidia02450 Actinidia chinensis HOM05D000045 ORTHO05D000067 2.0e-06 57.0 58 41.4
CSS0011546 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-06 57.0 51 47.1
QL06p047907 Quercus lobata HOM05D000045 ORTHO05D000067 2.0e-06 57.0 58 43.1
Rhsim02G0232300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-06 56.6 58 44.8
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.4e-06 56.2 58 39.7
Rhsim02G0126700 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.4e-06 56.2 58 44.8
CSS0046621 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.5e-06 55.8 56 42.9
CANSAT64G1822 Cannabis sativa HOM05D000045 ORTHO05D000067 4.5e-06 55.8 57 42.1
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.5e-06 55.8 58 43.1
RhsimUnG0130200 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.5e-06 55.8 58 44.8
MSTRG.8443 Avicennia marina HOM05D000045 ORTHO05D000067 5.9e-06 55.5 58 39.7
CSS0016639 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.9e-06 55.5 58 41.4
COL.COLO4_14274 Corchorus olitorius HOM05D000045 ORTHO05D000835 5.9e-06 55.5 58 41.4
FvH4_2g38071 Fragaria vesca HOM05D000045 ORTHO05D000067 5.9e-06 55.5 58 44.8
RcHm_v2.0_Chr1g0376821 Rosa chinensis HOM05D000045 ORTHO05D000067 5.9e-06 55.5 58 39.7
TPR.G35603 Trifolium pratense HOM05D000045 ORTHO05D000067 5.9e-06 55.5 58 43.1
Atru.chr3.2441 Acer truncatum HOM05D000045 ORTHO05D000067 7.7e-06 55.1 57 43.9
CSS0035044 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.7e-06 55.1 56 42.9
Migut.F01137 Erythranthe guttata HOM05D000045 ORTHO05D000067 7.7e-06 55.1 58 37.9
Lalb_Chr09g0328211 Lupinus albus HOM05D000045 ORTHO05D000067 7.7e-06 55.1 58 41.4
Os10g0571900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 7.7e-06 55.1 58 43.1
Rhsim12G0018100 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.7e-06 55.1 50 48.0
TAR483G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 7.7e-06 55.1 58 44.8
TAR511G0003 Trochodendron aralioides HOM05D000045 ORTHO05D000067 7.7e-06 55.1 58 44.8
Atru.chr5.2454 Acer truncatum HOM05D003511 ORTHO05D004403 1.0e-05 54.7 58 41.4
CSS0008128 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.0e-05 54.7 56 42.9
CSS0047463 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D009008 1.0e-05 54.7 58 37.9
Dinv28471 Davidia involucrata HOM05D000045 ORTHO05D000067 1.0e-05 54.7 58 41.4
Duzib205G0811 Durio zibethinus HOM05D000045 ORTHO05D000067 1.0e-05 54.7 58 39.7
FvH4_7g29092 Fragaria vesca HOM05D000045 ORTHO05D000067 1.0e-05 54.7 58 39.7
TAR633G1461 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.0e-05 54.7 58 36.2


User provided reference genes

Program Settings