Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39871 Trifolium pratense HOM05D001092 ORTHO05D413045 2.5e-08 60.5 29 100.0
TPR.G12636 Trifolium pratense HOM05D001092 ORTHO05D000923 7.4e-08 58.9 28 96.4
Ca_21396_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 1.3e-07 58.2 28 92.9
Phvul.003G119100 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 1.3e-07 58.2 28 92.9
Glyma.07G233100 Glycine max HOM05D001092 ORTHO05D000923 2.8e-07 57.0 28 89.3
Medtr4g123110 Medicago truncatula HOM05D001092 ORTHO05D000923 3.7e-07 56.6 28 89.3
Lalb_Chr13g0298791 Lupinus albus HOM05D001092 ORTHO05D000923 4.8e-07 56.2 28 82.1
Psat0s45g0040 Pisum sativum HOM05D001092 ORTHO05D000923 4.8e-07 56.2 28 85.7
Atru.chr4.3076 Acer truncatum HOM05D001092 ORTHO05D000923 1.4e-06 54.7 28 85.7
FvH4_4g20980 Fragaria vesca HOM05D001092 ORTHO05D000923 1.4e-06 54.7 28 85.7
FAN12G2952 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.4e-06 54.7 28 85.7
Lalb_Chr12g0200731 Lupinus albus HOM05D001092 ORTHO05D000923 1.4e-06 54.7 28 82.1
Potri.008G100600 Populus trichocarpa HOM05D001092 ORTHO05D000923 1.8e-06 54.3 28 82.1
Eucgr.H04089 Eucalyptus grandis HOM05D001092 ORTHO05D000923 2.4e-06 53.9 28 82.1
Manes.03G209800 Manihot esculenta HOM05D001092 ORTHO05D000923 2.4e-06 53.9 28 82.1
RcHm_v2.0_Chr4g0426501 Rosa chinensis HOM05D001092 ORTHO05D000923 2.4e-06 53.9 28 82.1
Sabra08G0076100 Salix brachista HOM05D001092 ORTHO05D000923 2.4e-06 53.9 28 82.1
MD13G1146800 Malus domestica HOM05D001092 ORTHO05D000923 3.1e-06 53.5 28 78.6
MD16G1145300 Malus domestica HOM05D001092 ORTHO05D000923 3.1e-06 53.5 28 78.6
CANSAT78G0281 Cannabis sativa HOM05D001092 ORTHO05D000923 4.0e-06 53.1 28 82.1
CARHR037730 Cardamine hirsuta HOM05D001092 ORTHO05D000923 4.0e-06 53.1 28 78.6
COL.COLO4_34529 Corchorus olitorius HOM05D001092 ORTHO05D000923 4.0e-06 53.1 28 78.6
Lj4g0014122 Lotus japonicus HOM05D001092 ORTHO05D000923 4.0e-06 53.1 28 82.1
Prupe.1G110200 Prunus persica HOM05D001092 ORTHO05D000923 4.0e-06 53.1 28 78.6
QL06p013490 Quercus lobata HOM05D001092 ORTHO05D000923 4.0e-06 53.1 28 75.0
Thecc.04G308400 Theobroma cacao HOM05D001092 ORTHO05D000923 4.0e-06 53.1 28 78.6
Ciclev10004114m.g Citrus clementina HOM05D001092 ORTHO05D000923 5.3e-06 52.8 28 82.1
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 5.3e-06 52.8 28 78.6
GSVIVG01017643001 Vitis vinifera HOM05D001092 ORTHO05D000923 5.3e-06 52.8 28 78.6
FAN17G2279 Fragaria x ananassa HOM05D001092 ORTHO05D000923 6.9e-06 52.4 28 82.1
Sc03g0001750 Simmondsia chinensis HOM05D001092 ORTHO05D000923 6.9e-06 52.4 28 78.6
CiPaw.01G132700 Carya illinoinensis HOM05D001092 ORTHO05D000923 9.0e-06 52.0 28 75.0
Gohir.A02G056800 Gossypium hirsutum HOM05D001092 ORTHO05D000923 9.0e-06 52.0 28 75.0
Gohir.D02G062000 Gossypium hirsutum HOM05D001092 ORTHO05D000923 9.0e-06 52.0 28 75.0
Gorai.005G069700 Gossypium raimondii HOM05D001092 ORTHO05D000923 9.0e-06 52.0 28 75.0
MD16G1145600 Malus domestica HOM05D001092 ORTHO05D000923 9.0e-06 52.0 28 75.0


User provided reference genes

Program Settings