Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39829 Trifolium pratense HOM05D012242 ORTHO05D001155 3.2e-43 177.9 85 100.0
Medtr4g007240 Medicago truncatula HOM05D012242 ORTHO05D001155 7.9e-34 146.7 84 83.3
Medtr8g102000 Medicago truncatula HOM05D012242 ORTHO05D001155 3.2e-27 124.8 95 68.4
Lj3g0002390 Lotus japonicus HOM05D012242 ORTHO05D001155 1.8e-22 109.0 80 67.5
arahy.Tifrunner.gnm1.ann1.3DAB2G Arachis hypogaea HOM05D012242 ORTHO05D001155 3.3e-16 88.2 68 57.4
arahy.Tifrunner.gnm1.ann1.58PES0 Arachis hypogaea HOM05D012242 ORTHO05D001155 4.8e-15 84.3 68 54.4
Phvul.010G162300 Phaseolus vulgaris HOM05D012242 ORTHO05D001155 1.4e-14 82.8 88 48.9
Phvul.010G162233 Phaseolus vulgaris HOM05D012242 ORTHO05D001155 9.0e-14 80.1 88 47.7
Lalb_Chr04g0264551 Lupinus albus HOM05D012242 ORTHO05D001155 1.7e-12 75.9 73 49.3
Medtr8g101680 Medicago truncatula HOM05D012242 ORTHO05D001155 6.5e-12 73.9 44 79.5
Glyma.09G075900 Glycine max HOM05D001729 ORTHO05D001155 1.9e-08 62.4 56 55.4
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 3.3e-08 61.6 51 56.9
QL07p036110 Quercus lobata HOM05D001729 ORTHO05D001155 3.3e-08 61.6 70 45.7
Phvul.009G222800 Phaseolus vulgaris HOM05D001729 ORTHO05D001155 7.4e-08 60.5 59 50.8
QL08p043324 Quercus lobata HOM05D001729 ORTHO05D001155 2.8e-07 58.5 56 51.8
Aqoxy7G01158 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 4.8e-07 57.8 67 41.8
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 8.2e-07 57.0 52 53.8
Aqoxy3G00459 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.1e-06 56.6 71 40.8
QL06p001050 Quercus lobata HOM05D001729 ORTHO05D001155 1.4e-06 56.2 51 54.9
EL10Ac8g19997 Beta vulgaris HOM05D007956 ORTHO05D010152 1.8e-06 55.8 61 47.5
QL05p074214 Quercus lobata HOM05D001729 ORTHO05D001155 1.8e-06 55.8 50 48.0
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-06 55.1 55 52.7
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.1e-06 54.7 55 50.9
AUR62006002 Chenopodium quinoa HOM05D001729 ORTHO05D001155 5.3e-06 54.3 48 54.2
Psat4g020960 Pisum sativum HOM05D001729 ORTHO05D001155 5.3e-06 54.3 55 47.3
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.9e-06 53.9 65 44.6
Lj4g0002979 Lotus japonicus HOM05D001729 ORTHO05D001155 6.9e-06 53.9 75 40.0
QL05p074160 Quercus lobata HOM05D001729 ORTHO05D001155 6.9e-06 53.9 59 37.3
QL07p003276 Quercus lobata HOM05D000007 ORTHO05D000039 6.9e-06 53.9 59 42.4
Dinv04029 Davidia involucrata HOM05D001729 ORTHO05D001155 9.1e-06 53.5 57 45.6
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.1e-06 53.5 55 49.1
Hund23305 Selenicereus undatus HOM05D001340 ORTHO05D011069 9.1e-06 53.5 42 54.8


User provided reference genes

Program Settings