Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39760 Trifolium pratense HOM05D003277 ORTHO05D003275 2.8e-70 268.5 132 100.0
Psat7g251560 Pisum sativum HOM05D003277 ORTHO05D003275 1.1e-50 203.4 122 83.6
Psat7g251800 Pisum sativum HOM05D003277 ORTHO05D003275 1.2e-49 199.9 124 83.9
Psat7g252120 Pisum sativum HOM05D003277 ORTHO05D003275 1.6e-49 199.5 130 75.4
Psat7g251680 Pisum sativum HOM05D003277 ORTHO05D003275 1.0e-48 196.8 122 81.1
Psat7g251760 Pisum sativum HOM05D003277 ORTHO05D003275 1.0e-48 196.8 124 79.8
Psat7g251720 Pisum sativum HOM05D003277 ORTHO05D003275 3.3e-47 191.8 122 80.3
Medtr4g012490 Medicago truncatula HOM05D003277 ORTHO05D003275 5.6e-47 191.0 123 77.2
Psat7g251640 Pisum sativum HOM05D003277 ORTHO05D003275 5.6e-47 191.0 122 79.5
Medtr4g012390 Medicago truncatula HOM05D003277 ORTHO05D003275 3.7e-46 188.3 130 73.1
Medtr4g012460 Medicago truncatula HOM05D003277 ORTHO05D003275 4.8e-46 188.0 119 79.8
Medtr4g012330 Medicago truncatula HOM05D003277 ORTHO05D003275 2.4e-45 185.7 131 75.6
TPR.G39761 Trifolium pratense HOM05D003277 ORTHO05D003275 2.6e-44 182.2 139 74.1
Medtr4g012510 Medicago truncatula HOM05D003277 ORTHO05D003275 7.6e-44 180.6 123 76.4
Medtr4g012350 Medicago truncatula HOM05D003277 ORTHO05D003275 1.7e-43 179.5 123 74.8
Psat7g252160 Pisum sativum HOM05D003277 ORTHO05D003275 4.9e-43 177.9 127 73.2
TPR.G24192 Trifolium pratense HOM05D003277 ORTHO05D003275 1.4e-42 176.4 124 79.0
Psat7g252200 Pisum sativum HOM05D003277 ORTHO05D003275 9.7e-39 163.7 127 69.3
Glyma.08G206600 Glycine max HOM05D003277 ORTHO05D003275 1.0e-32 143.7 128 67.2
Glyma.07G006000 Glycine max HOM05D003277 ORTHO05D003275 3.7e-30 135.2 128 64.1
VMungo0331G0823 Vigna mungo HOM05D003277 ORTHO05D003275 1.8e-29 132.9 123 62.6
Lalb_Chr25g0279671 Lupinus albus HOM05D003277 ORTHO05D003275 5.9e-28 127.9 125 58.4
Lj3g0000153 Lotus japonicus HOM05D003277 ORTHO05D003275 7.7e-28 127.5 112 67.0
Phvul.010G150400 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 5.0e-27 124.8 119 60.5
Lalb_Chr04g0262721 Lupinus albus HOM05D003277 ORTHO05D003275 7.2e-26 120.9 107 61.7
Glyma.15G014600 Glycine max HOM05D003277 ORTHO05D003275 2.1e-25 119.4 116 57.8
Glyma.13G359300 Glycine max HOM05D003277 ORTHO05D003275 3.6e-25 118.6 110 60.9
Phvul.005G171100 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 2.8e-22 109.0 110 55.5
Lalb_Chr04g0262701 Lupinus albus HOM05D003277 ORTHO05D003275 3.7e-22 108.6 102 59.8
arahy.Tifrunner.gnm1.ann1.YJAD7Q Arachis hypogaea HOM05D003277 ORTHO05D003275 1.8e-16 89.7 75 68.0
arahy.Tifrunner.gnm1.ann1.9450TA Arachis hypogaea HOM05D003277 ORTHO05D003275 1.5e-15 86.7 150 43.3
arahy.Tifrunner.gnm1.ann1.RIWW0V Arachis hypogaea HOM05D003277 ORTHO05D003275 2.0e-15 86.3 138 44.9
VMungo1080G1196 Vigna mungo HOM05D003111 ORTHO05D003502 3.7e-14 82.0 64 70.3
Ciclev10026796m.g Citrus clementina HOM05D003277 ORTHO05D003275 7.7e-12 74.3 112 45.5
Atru.chr1.3275 Acer truncatum HOM05D003277 ORTHO05D003275 1.0e-11 73.9 108 45.4
Thecc.06G088500 Theobroma cacao HOM05D003277 ORTHO05D003275 3.8e-11 72.0 115 41.7
Cc02_g27850 Coffea canephora HOM05D003277 ORTHO05D003275 6.5e-11 71.2 78 51.3
Cc04_g03410 Coffea canephora HOM05D003277 ORTHO05D003275 8.5e-11 70.9 77 51.9
Duzib235G0396 Durio zibethinus HOM05D003277 ORTHO05D003275 1.1e-10 70.5 111 43.2
Hma1.2p1_0092F.1_g046645 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 1.5e-10 70.1 99 43.4
Peaxi162Scf00015g00042 Petunia axillaris HOM05D003277 ORTHO05D003275 1.9e-10 69.7 67 62.7
SGA_v2.0_scaffold5G02589 Striga asiatica HOM05D003277 ORTHO05D003275 1.9e-10 69.7 68 58.8
Nitab4.5_0002859g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 3.2e-10 68.9 116 42.2
Oeu033486.1 Olea europaea HOM05D003277 ORTHO05D003275 4.2e-10 68.6 99 45.5
Glyma.07G087300 Glycine max HOM05D003277 ORTHO05D003275 1.2e-09 67.0 112 42.9
QL05p023505 Quercus lobata HOM05D003277 ORTHO05D003275 1.6e-09 66.6 90 48.9
Migut.I00868 Erythranthe guttata HOM05D003277 ORTHO05D003275 2.1e-09 66.2 120 44.2
Ca_01117_v3 Cicer arietinum L. HOM05D003111 ORTHO05D003502 2.7e-09 65.9 60 61.7
Actinidia32754 Actinidia chinensis HOM05D003277 ORTHO05D003275 4.7e-09 65.1 102 44.1
COL.COLO4_30383 Corchorus olitorius HOM05D003277 ORTHO05D003275 4.7e-09 65.1 115 43.5
Gohir.D05G129700 Gossypium hirsutum HOM05D003277 ORTHO05D003275 4.7e-09 65.1 88 46.6
Gorai.009G133500 Gossypium raimondii HOM05D003277 ORTHO05D003275 4.7e-09 65.1 88 46.6
Solyc03g120170.1 Solanum lycopersicum HOM05D003277 ORTHO05D003275 4.7e-09 65.1 107 47.7
CSS0031837 Camellia sinensis var. sinensis HOM05D003277 ORTHO05D003275 1.0e-08 63.9 79 51.9
Nitab4.5_0000671g0120 Nicotiana tabacum HOM05D003277 ORTHO05D003275 1.0e-08 63.9 102 45.1
Oeu063975.1 Olea europaea HOM05D003277 ORTHO05D003275 1.0e-08 63.9 103 44.7
Oeu063976.1 Olea europaea HOM05D003277 ORTHO05D003275 1.0e-08 63.9 103 44.7
Thecc.09G112200 Theobroma cacao HOM05D003277 ORTHO05D003275 1.0e-08 63.9 112 42.0
Lsat_1_v5_gn_5_130221 Lactuca sativa HOM05D003277 ORTHO05D003275 1.4e-08 63.5 98 41.8
SalBow2G1122 Salvia bowleyana HOM05D003277 ORTHO05D003275 1.4e-08 63.5 92 43.5
Gorai.001G004600 Gossypium raimondii HOM05D003277 ORTHO05D003275 2.3e-08 62.8 115 40.0
Nitab4.5_0005851g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 2.3e-08 62.8 98 44.9
Gohir.A07G006900 Gossypium hirsutum HOM05D003277 ORTHO05D003275 3.0e-08 62.4 70 52.9
Sopen06g025000 Solanum pennellii HOM05D003277 ORTHO05D003275 3.0e-08 62.4 62 58.1
PGSC0003DMG400005684 Solanum tuberosum HOM05D003277 ORTHO05D003275 3.0e-08 62.4 104 43.3
vmacro18910 Vaccinium macrocarpon HOM05D003277 ORTHO05D003275 3.0e-08 62.4 117 39.3
Gohir.A05G130300 Gossypium hirsutum HOM05D003277 ORTHO05D003275 5.2e-08 61.6 88 44.3
CAN.G438.69 Capsicum annuum HOM05D003277 ORTHO05D003275 6.7e-08 61.2 64 57.8
Gohir.D07G005000 Gossypium hirsutum HOM05D003277 ORTHO05D003275 6.7e-08 61.2 70 51.4
Phvul.004G162400 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 6.7e-08 61.2 113 42.5
Manes.04G123700 Manihot esculenta HOM05D003277 ORTHO05D003275 8.8e-08 60.8 102 44.1
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 8.8e-08 60.8 115 42.6
Potri.001G180500 Populus trichocarpa HOM05D003277 ORTHO05D003275 8.8e-08 60.8 101 43.6
Solyc06g066710.1 Solanum lycopersicum HOM05D003277 ORTHO05D003275 8.8e-08 60.8 61 57.4
Sopen03g039050 Solanum pennellii HOM05D003277 ORTHO05D003275 8.8e-08 60.8 64 56.2
PGSC0003DMG400016508 Solanum tuberosum HOM05D003277 ORTHO05D003275 8.8e-08 60.8 62 56.5
Duzib150G0682 Durio zibethinus HOM05D003277 ORTHO05D003275 1.2e-07 60.5 114 40.4
Lalb_Chr25g0279751 Lupinus albus HOM05D003277 ORTHO05D003275 1.2e-07 60.5 66 47.0
Potri.003G055100 Populus trichocarpa HOM05D003277 ORTHO05D003275 1.2e-07 60.5 101 42.6
Sabra01G0146300 Salix brachista HOM05D003277 ORTHO05D003275 1.2e-07 60.5 105 43.8
ATR1120G144 Amborella trichopoda HOM05D003277 ORTHO05D003275 1.5e-07 60.1 110 38.2
MBI04_g08935_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 1.5e-07 60.1 88 45.5
Migut.D01029 Erythranthe guttata HOM05D003277 ORTHO05D003275 2.0e-07 59.7 67 55.2
Nn8g39213 Nelumbo nucifera HOM05D003277 ORTHO05D003275 2.0e-07 59.7 65 56.9
Haze_16418 Corylus avellana HOM05D003277 ORTHO05D003275 3.3e-07 58.9 84 40.5
COL.COLO4_34902 Corchorus olitorius HOM05D003277 ORTHO05D003275 4.4e-07 58.5 116 36.2
Manes.11G047000 Manihot esculenta HOM05D003277 ORTHO05D003275 4.4e-07 58.5 83 49.4
Prupe.7G229300 Prunus persica HOM05D003277 ORTHO05D003275 4.4e-07 58.5 73 50.7
Actinidia08979 Actinidia chinensis HOM05D005698 ORTHO05D007022 5.7e-07 58.2 79 44.3
Cfa002072 Carpinus fangiana HOM05D003277 ORTHO05D003275 5.7e-07 58.2 85 42.4
Haze_16415 Corylus avellana HOM05D003277 ORTHO05D003275 5.7e-07 58.2 85 40.0
CAN.G395.13 Capsicum annuum HOM05D003277 ORTHO05D003275 7.5e-07 57.8 68 50.0
Cfa003268 Carpinus fangiana HOM05D003277 ORTHO05D003275 7.5e-07 57.8 65 53.8
HanXRQChr10g0313381 Helianthus annuus HOM05D003277 ORTHO05D003275 7.5e-07 57.8 80 48.8
Nn2g11767 Nelumbo nucifera HOM05D003277 ORTHO05D003275 7.5e-07 57.8 64 50.0
TAR624G0051 Trochodendron aralioides HOM05D003277 ORTHO05D003275 7.5e-07 57.8 81 51.9
Haze_25704 Corylus avellana HOM05D000750 ORTHO05D000714 1.7e-06 56.6 108 38.0
Lalb_Chr04g0262691 Lupinus albus HOM05D003277 ORTHO05D003275 1.7e-06 56.6 59 55.9
Lalb_Chr25g0279761 Lupinus albus HOM05D003277 ORTHO05D003275 1.7e-06 56.6 67 44.8
VMungo0251G2336 Vigna mungo HOM05D003277 ORTHO05D003275 1.7e-06 56.6 57 56.1
Prupe.3G070700 Prunus persica HOM05D003277 ORTHO05D003275 2.2e-06 56.2 96 38.5
QL02p085574 Quercus lobata HOM05D003277 ORTHO05D003275 2.2e-06 56.2 108 40.7
Glyma.09G189600 Glycine max HOM05D003277 ORTHO05D003275 2.8e-06 55.8 66 50.0
MD17G1194700 Malus domestica HOM05D003277 ORTHO05D003275 2.8e-06 55.8 94 40.4
Sc09g0008990 Simmondsia chinensis HOM05D003277 ORTHO05D003275 2.8e-06 55.8 69 56.5
Manes.03G064500 Manihot esculenta HOM05D003277 ORTHO05D003275 3.7e-06 55.5 73 50.7
Manes.03G064940 Manihot esculenta HOM05D003277 ORTHO05D003275 3.7e-06 55.5 73 50.7
SalBow2G2751 Salvia bowleyana HOM05D003277 ORTHO05D003275 3.7e-06 55.5 80 47.5
Thecc.09G038300 Theobroma cacao HOM05D003277 ORTHO05D003275 3.7e-06 55.5 62 56.5
Duzib150G1012 Durio zibethinus HOM05D000818 ORTHO05D003275 4.8e-06 55.1 100 41.0
MBI01_g34157_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 4.8e-06 55.1 97 39.2
Rhsim07G0155500 Rhododendron simsii HOM05D003277 ORTHO05D003275 4.8e-06 55.1 70 50.0
CANSAT56G1808 Cannabis sativa HOM05D003277 ORTHO05D003275 6.3e-06 54.7 123 41.5
Manes.16G066800 Manihot esculenta HOM05D003277 ORTHO05D003275 6.3e-06 54.7 68 55.9
Cfa013333 Carpinus fangiana HOM05D003277 ORTHO05D003275 8.2e-06 54.3 76 40.8
Phvul.002G313800 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 8.2e-06 54.3 63 55.6


User provided reference genes

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