Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39738 Trifolium pratense HOM05D003517 ORTHO05D009794 4.4e-30 134.0 71 100.0
CANSAT16G0040 Cannabis sativa HOM05D003517 ORTHO05D009794 1.1e-28 129.4 69 98.6
Lj5g0026865 Lotus japonicus HOM05D003517 ORTHO05D009794 1.4e-28 129.0 71 95.8
LjContig00439g0001390 Lotus japonicus HOM05D003517 ORTHO05D009794 1.4e-28 129.0 71 95.8
LjContig00446g0016600 Lotus japonicus HOM05D003517 ORTHO05D009794 1.4e-28 129.0 71 95.8
ATMG00270 Arabidopsis thaliana HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 97.1
BNapus_Darmor_BZH_scaffold_234p00290 Brassica napus HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 97.1
BolSC28t60338H Brassica oleracea HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 97.1
BolSC28t60397H Brassica oleracea HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 97.1
BraSC77t46643Z Brassica rapa HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 97.1
CARHR282730 Cardamine hirsuta HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 97.1
Lj2P1233T102 Lonicera japonica HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 97.1
Lj2P1236T75 Lonicera japonica HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 97.1
Lalb_Chr00c21g0406031 Lupinus albus HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 95.7
Lalb_Chr00c39g0409031 Lupinus albus HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 95.7
Lalb_Chr00c39g0409211 Lupinus albus HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 95.7
Lalb_Chr00c51g0413121 Lupinus albus HOM05D003517 ORTHO05D009794 9.2e-28 126.3 69 95.7
DCAR_032460 Daucus carota HOM05D003517 ORTHO05D009794 1.2e-27 125.9 71 95.8
Peaxi162Scf00456g00029 Petunia axillaris HOM05D003517 ORTHO05D009794 1.6e-27 125.6 68 97.1
Solyc00g021630.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 1.6e-27 125.6 68 97.1
RcHm_v2.0_MTg0498991 Rosa chinensis HOM05D003517 ORTHO05D009794 2.0e-27 125.2 69 95.7
Sed0011263 Sechium edule HOM05D003517 ORTHO05D009794 7.8e-27 123.2 67 97.0
Sed0015872 Sechium edule HOM05D003517 ORTHO05D009794 7.8e-27 123.2 67 97.0
Aqoxy38s018 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 1.3e-26 122.5 69 94.2
Thhalv10029192m.g Eutrema salsugineum HOM05D003517 ORTHO05D009794 1.3e-26 122.5 69 94.2
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.3e-26 121.7 68 92.6
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 2.3e-26 121.7 68 94.1
SabraMtG0003300 Salix brachista HOM05D003517 ORTHO05D009794 3.0e-26 121.3 66 95.5
SHI35306 Sapria himalayana HOM05D003517 ORTHO05D009794 6.6e-26 120.2 71 91.5
SHI49089 Sapria himalayana HOM05D003517 ORTHO05D009794 6.6e-26 120.2 71 91.5
SHI53309 Sapria himalayana HOM05D003517 ORTHO05D009794 6.6e-26 120.2 71 91.5
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 1.5e-25 119.0 65 95.4
Nn003s41395 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.9e-25 118.6 68 94.1
Nn1g09965 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.9e-25 118.6 68 94.1
Nn1g10124 Nelumbo nucifera HOM05D003517 ORTHO05D009794 1.9e-25 118.6 68 94.1
CAN.G1.11 Capsicum annuum HOM05D003517 ORTHO05D009794 3.3e-25 117.9 68 91.2
Glyma.08G301000 Glycine max HOM05D003517 ORTHO05D009794 5.6e-25 117.1 65 95.4
Gohir.A03G108600 Gossypium hirsutum HOM05D003517 ORTHO05D009794 5.6e-25 117.1 70 91.4
Gorai.001G168000 Gossypium raimondii HOM05D003517 ORTHO05D009794 4.7e-24 114.0 70 90.0
Sp3g25610 Schrenkiella parvula HOM05D003517 ORTHO05D009794 4.7e-24 114.0 63 96.8
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.1e-23 112.8 68 88.2
unitig_0.g2040 Utricularia gibba HOM05D003517 ORTHO05D009794 1.8e-23 112.1 68 89.7
Nitab4.5_0000172g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.3e-23 111.7 68 86.8
HanXRQChr00c0234g0572741 Helianthus annuus HOM05D003517 ORTHO05D009794 5.2e-23 110.5 67 91.0
HanXRQMTg0579471 Helianthus annuus HOM05D003517 ORTHO05D009794 5.2e-23 110.5 67 91.0
MBI05_g05356_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009794 3.4e-22 107.8 68 88.2
HanXRQChr02g0049481 Helianthus annuus HOM05D003517 ORTHO05D009794 4.1e-20 100.9 67 86.6
CDE02G3221 Ceratophyllum demersum HOM05D003517 ORTHO05D009794 1.2e-19 99.4 58 93.1
Gohir.A08G086024 Gossypium hirsutum HOM05D003517 ORTHO05D009794 3.5e-19 97.8 69 78.3
Nitab4.5_0000172g0410 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.7e-18 95.5 57 89.5
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.5e-17 92.4 62 85.5
arahy.Tifrunner.gnm1.ann1.N584HR Arachis hypogaea HOM05D003517 ORTHO05D009794 6.2e-16 87.0 59 83.1
CSS0025973 Camellia sinensis var. sinensis HOM05D003517 ORTHO05D009794 2.3e-15 85.1 48 93.8
LjContig00315g0004708 Lotus japonicus HOM05D003517 ORTHO05D009794 6.8e-15 83.6 62 74.2
Sp5g20260 Schrenkiella parvula HOM05D003517 ORTHO05D009794 8.3e-13 76.6 56 80.4
HanXRQChr01g0013411 Helianthus annuus HOM05D003517 ORTHO05D009794 2.7e-11 71.6 41 92.7
Nitab4.5_0003945g0090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.9e-10 67.8 41 87.8
Lj2P92T86 Lonicera japonica HOM05D003517 ORTHO05D009794 6.2e-08 60.5 34 94.1
CiPaw.05G081600 Carya illinoinensis HOM05D003517 ORTHO05D009794 1.1e-07 59.7 46 78.3


User provided reference genes

Program Settings