Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39730 Trifolium pratense HOM05D008547 ORTHO05D010515 5.2e-262 907.1 441 100.0
Medtr5g090860 Medicago truncatula HOM05D008547 ORTHO05D010515 9.2e-118 427.9 406 57.4
Ca_23530_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.1e-114 416.8 408 57.4
Medtr1g102770 Medicago truncatula HOM05D008547 ORTHO05D010515 1.3e-111 407.5 363 57.9
Medtr8g027525 Medicago truncatula HOM05D008547 ORTHO05D010515 1.1e-110 404.4 390 57.2
TPR.G16823 Trifolium pratense HOM05D008547 ORTHO05D010515 8.0e-106 388.3 406 53.9
Psat1g047400 Pisum sativum HOM05D008547 ORTHO05D010515 1.8e-105 387.1 411 52.8
TPR.G16819 Trifolium pratense HOM05D008547 ORTHO05D010515 6.8e-105 385.2 414 53.6
TPR.G26111 Trifolium pratense HOM05D008547 ORTHO05D010515 1.1e-102 377.9 423 52.7
Psat4g161600 Pisum sativum HOM05D008547 ORTHO05D010515 1.4e-102 377.5 395 54.2
Medtr8g027595 Medicago truncatula HOM05D008547 ORTHO05D010515 5.6e-99 365.5 414 52.7
Medtr5g009560 Medicago truncatula HOM05D008547 ORTHO05D010515 1.5e-96 357.5 406 52.2
Psat4g187360 Pisum sativum HOM05D008547 ORTHO05D010515 2.4e-89 333.6 391 50.4
TPR.G32061 Trifolium pratense HOM05D008547 ORTHO05D010515 2.0e-88 330.5 431 47.3
Psat4g161480 Pisum sativum HOM05D008547 ORTHO05D010515 4.4e-88 329.3 371 52.0
TPR.G8333 Trifolium pratense HOM05D008547 ORTHO05D010515 4.4e-88 329.3 415 48.2
Ca_14816_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.1e-85 320.5 431 45.7
Medtr5g090850 Medicago truncatula HOM05D008547 ORTHO05D010515 8.7e-84 315.1 356 52.5
TPR.G12161 Trifolium pratense HOM05D008547 ORTHO05D010515 1.5e-83 314.3 395 48.6
Ca_15277_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 7.6e-80 302.0 413 45.5
Medtr8g065650 Medicago truncatula HOM05D008547 ORTHO05D010515 2.2e-79 300.4 432 43.3
Ca_15416_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.6e-77 294.3 388 45.6
TPR.G27684 Trifolium pratense HOM05D008547 ORTHO05D010515 2.1e-77 293.9 363 47.9
Medtr1g017800 Medicago truncatula HOM05D008547 ORTHO05D010515 1.0e-76 291.6 380 47.1
Ca_17126_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.3e-74 284.6 425 45.2
TPR.G16818 Trifolium pratense HOM05D008547 ORTHO05D010515 3.4e-72 276.6 319 49.5
Medtr6g004080 Medicago truncatula HOM05D008547 ORTHO05D010515 2.8e-66 256.9 289 50.2
Psat4g206720 Pisum sativum HOM05D008547 ORTHO05D010515 2.2e-55 220.7 246 51.6
TPR.G23739 Trifolium pratense HOM05D008547 ORTHO05D010515 4.3e-51 206.5 236 49.2
Medtr5g012050 Medicago truncatula HOM05D008547 ORTHO05D010515 2.6e-48 197.2 210 50.0
Medtr3g023820 Medicago truncatula HOM05D008547 ORTHO05D010515 1.3e-47 194.9 238 47.1
TPR.G38872 Trifolium pratense HOM05D008547 ORTHO05D010515 1.5e-43 181.4 300 42.7
Medtr1g103170 Medicago truncatula HOM05D008547 ORTHO05D010515 2.9e-39 167.2 151 55.6
TPR.G21917 Trifolium pratense HOM05D008547 ORTHO05D010515 2.7e-37 160.6 168 49.4
arahy.Tifrunner.gnm1.ann1.MSS51R Arachis hypogaea HOM05D008547 ORTHO05D010515 3.6e-37 160.2 396 33.6
arahy.Tifrunner.gnm1.ann1.72JBMR Arachis hypogaea HOM05D008547 ORTHO05D010515 7.9e-37 159.1 394 33.5
Lj2g0004475 Lotus japonicus HOM05D008547 ORTHO05D010515 3.0e-36 157.1 395 33.2
Medtr5g013160 Medicago truncatula HOM05D008547 ORTHO05D010515 9.7e-35 152.1 143 59.4
Medtr8g027530 Medicago truncatula HOM05D008547 ORTHO05D010515 1.3e-34 151.8 400 33.2
Psat4g188000 Pisum sativum HOM05D008547 ORTHO05D010515 1.6e-29 134.8 150 51.3
TPR.G21157 Trifolium pratense HOM05D008547 ORTHO05D010515 2.3e-28 131.0 80 81.2
Medtr5g013170 Medicago truncatula HOM05D008547 ORTHO05D010515 1.6e-24 118.2 110 58.2
TPR.G20414 Trifolium pratense HOM05D008547 ORTHO05D010515 4.2e-22 110.2 149 52.3
TPR.G7992 Trifolium pratense HOM05D008547 ORTHO05D010515 5.2e-20 103.2 119 50.4
TPR.G9477 Trifolium pratense HOM05D008547 ORTHO05D010515 4.4e-19 100.1 82 64.6
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 5.9e-16 89.7 374 27.0
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 7.7e-16 89.4 374 26.7
TPR.G7989 Trifolium pratense HOM05D008547 ORTHO05D010515 1.9e-14 84.7 98 55.1
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 5.5e-14 83.2 291 28.9
COL.COLO4_24243 Corchorus olitorius HOM05D050221 ORTHO05D010515 3.6e-13 80.5 404 26.0
Migut.A00619 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.0e-12 79.0 393 23.2
Medtr8g027560 Medicago truncatula HOM05D008547 ORTHO05D010515 5.2e-12 76.6 71 60.6
CiPaw.02G099600 Carya illinoinensis HOM05D006664 ORTHO05D009007 1.7e-10 71.6 422 25.8
Aqoxy5G04107 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 1.2e-08 65.5 199 30.7
Migut.A00778 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.2e-08 65.5 133 27.8
SGA_v2.0_scaffold69G23259 Striga asiatica HOM05D006664 ORTHO05D009007 2.7e-08 64.3 241 27.8
TAR633G2422 Trochodendron aralioides HOM05D007726 ORTHO05D008819 2.7e-08 64.3 386 22.5
TAR636G2839 Trochodendron aralioides HOM05D000007 ORTHO05D000521 2.9e-07 60.8 263 26.6
PSO421G0204 Papaver somniferum HOM05D004049 ORTHO05D004496 1.1e-06 58.9 309 24.3
Prupe.3G191300 Prunus persica HOM05D000007 ORTHO05D000017 1.1e-06 58.9 132 31.8
Migut.F01755 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.5e-06 58.5 182 24.2
SalBow7G3538 Salvia bowleyana HOM05D000007 ORTHO05D000039 3.3e-06 57.4 302 21.5
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.3e-06 57.0 217 26.3
PSO170G6042 Papaver somniferum HOM05D000007 ORTHO05D000676 4.3e-06 57.0 191 25.7
Migut.A00481 Erythranthe guttata HOM05D006664 ORTHO05D009007 7.3e-06 56.2 199 22.6
Migut.F01618 Erythranthe guttata HOM05D000007 ORTHO05D000017 7.3e-06 56.2 130 27.7
SalBow8G0466 Salvia bowleyana HOM05D000007 ORTHO05D000017 7.3e-06 56.2 194 24.7
SalBow8G1727 Salvia bowleyana HOM05D000007 ORTHO05D000017 7.3e-06 56.2 194 24.7
Thecc.06G029700 Theobroma cacao HOM05D000007 ORTHO05D000039 9.5e-06 55.8 290 23.1


User provided reference genes

Program Settings