Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39711 Trifolium pratense HOM05D007358 ORTHO05D009117 4.4e-53 211.1 110 100.0
Medtr6g005000 Medicago truncatula HOM05D007358 ORTHO05D009117 3.1e-14 82.0 55 80.0
Glyma.05G004200 Glycine max HOM05D007358 ORTHO05D009117 2.9e-12 75.5 74 56.8
VMungo0464G1987 Vigna mungo HOM05D007358 ORTHO05D009117 7.1e-11 70.9 57 66.7
Cpa.g.sc108.57 Carica papaya HOM05D007358 ORTHO05D009117 6.6e-09 64.3 80 41.2
AL7G49460 Arabidopsis lyrata HOM05D007358 ORTHO05D009117 1.5e-08 63.2 75 41.3
Thhalv10027688m.g Eutrema salsugineum HOM05D007358 ORTHO05D009117 2.5e-08 62.4 75 41.3
AT5G40400 Arabidopsis thaliana HOM05D007358 ORTHO05D009117 3.3e-08 62.0 86 41.9
A04p13440 Brassica napus HOM05D007358 ORTHO05D009117 4.3e-08 61.6 75 40.0
BraA04t17002Z Brassica rapa HOM05D007358 ORTHO05D009117 4.3e-08 61.6 75 40.0
Lsat_1_v5_gn_3_20581 Lactuca sativa HOM05D007358 ORTHO05D009117 4.3e-08 61.6 86 41.9
CSS0010405 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 5.6e-08 61.2 74 44.6
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 9.6e-08 60.5 75 38.7
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 9.6e-08 60.5 75 38.7
ECA246G0598 Erigeron canadensis HOM05D007358 ORTHO05D009117 1.6e-07 59.7 75 42.7
Carub.0007s3520 Capsella rubella HOM05D007358 ORTHO05D009117 4.8e-07 58.2 75 38.7
CARHR261620 Cardamine hirsuta HOM05D007358 ORTHO05D009117 6.2e-07 57.8 74 40.5
Cc09_g03920 Coffea canephora HOM05D007358 ORTHO05D009117 1.8e-06 56.2 63 49.2
Sp7g01520 Schrenkiella parvula HOM05D007358 ORTHO05D009117 1.8e-06 56.2 86 37.2


User provided reference genes

Program Settings