Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3971 Trifolium pratense HOM05D000062 ORTHO05D412617 5.2e-26 121.3 77 100.0
TPR.G9010 Trifolium pratense HOM05D000062 ORTHO05D008040 1.1e-20 103.6 48 95.8
TPR.G25227 Trifolium pratense HOM05D000062 ORTHO05D008040 2.8e-19 99.0 48 91.7
TPR.G19719 Trifolium pratense HOM05D000062 ORTHO05D411668 2.4e-18 95.9 48 89.6
TPR.G9002 Trifolium pratense HOM05D000062 ORTHO05D008040 9.6e-12 73.9 47 68.1
TPR.G34127 Trifolium pratense HOM05D000062 ORTHO05D008040 1.6e-11 73.2 47 66.0
Medtr4g107920 Medicago truncatula HOM05D000062 ORTHO05D008040 3.6e-11 72.0 41 73.2
TPR.G13709 Trifolium pratense HOM05D000062 ORTHO05D008040 6.2e-11 71.2 47 70.2
TPR.G8004 Trifolium pratense HOM05D000062 ORTHO05D021134 3.1e-10 68.9 44 70.5
Ca_21652_v3 Cicer arietinum L. HOM05D000062 ORTHO05D008040 4.0e-10 68.6 44 68.2
TPR.G38401 Trifolium pratense HOM05D000062 ORTHO05D008040 3.4e-09 65.5 47 66.0
TPR.G7997 Trifolium pratense HOM05D000062 ORTHO05D008040 9.9e-09 63.9 44 59.1
TPR.G7617 Trifolium pratense HOM05D000062 ORTHO05D412382 2.9e-08 62.4 44 56.8
Medtr4g115780 Medicago truncatula HOM05D000062 ORTHO05D008040 9.3e-07 57.4 45 57.8
QL06p002678 Quercus lobata HOM05D000062 ORTHO05D008040 9.3e-07 57.4 44 61.4
Ca_24394_v3 Cicer arietinum L. HOM05D000062 ORTHO05D008040 1.2e-06 57.0 48 60.4
Cfa015634 Carpinus fangiana HOM05D000062 ORTHO05D008040 1.6e-06 56.6 44 61.4
TAR365G0407 Trochodendron aralioides HOM05D000062 ORTHO05D008040 1.6e-06 56.6 44 61.4
Nn1g02279 Nelumbo nucifera HOM05D000062 ORTHO05D008040 2.1e-06 56.2 44 56.8
Gohir.A09G215200 Gossypium hirsutum HOM05D000062 ORTHO05D008040 3.5e-06 55.5 44 59.1
Gohir.D09G217700 Gossypium hirsutum HOM05D000062 ORTHO05D008040 3.5e-06 55.5 44 59.1
Gorai.006G238400 Gossypium raimondii HOM05D000062 ORTHO05D008040 3.5e-06 55.5 44 59.1
Medtr5g006180 Medicago truncatula HOM05D000062 ORTHO05D008040 3.5e-06 55.5 44 59.1
GSVIVG01017960001 Vitis vinifera HOM05D000062 ORTHO05D008040 3.5e-06 55.5 44 59.1
CiPaw.01G165100 Carya illinoinensis HOM05D000062 ORTHO05D008040 4.6e-06 55.1 44 59.1
ClCG05G005200 Citrullus lanatus HOM05D000062 ORTHO05D008040 4.6e-06 55.1 44 59.1
COL.COLO4_05311 Corchorus olitorius HOM05D000062 ORTHO05D008040 4.6e-06 55.1 44 56.8
CsaV3_3G013380 Cucumis sativus L. HOM05D000062 ORTHO05D008040 4.6e-06 55.1 44 59.1
Duzib212G0736 Durio zibethinus HOM05D000062 ORTHO05D008040 4.6e-06 55.1 44 56.8
Lj1g0020820 Lotus japonicus HOM05D000062 ORTHO05D008040 4.6e-06 55.1 44 59.1
Sed0020943 Sechium edule HOM05D000062 ORTHO05D008040 4.6e-06 55.1 44 59.1
Thecc.04G230400 Theobroma cacao HOM05D000062 ORTHO05D008040 4.6e-06 55.1 44 56.8
arahy.Tifrunner.gnm1.ann1.462RQZ Arachis hypogaea HOM05D000062 ORTHO05D008040 6.0e-06 54.7 44 61.4
arahy.Tifrunner.gnm1.ann1.6XM150 Arachis hypogaea HOM05D000062 ORTHO05D008040 6.0e-06 54.7 44 61.4
CANSAT78G0393 Cannabis sativa HOM05D000062 ORTHO05D008040 6.0e-06 54.7 44 59.1
Haze_00910 Corylus avellana HOM05D000062 ORTHO05D008040 6.0e-06 54.7 44 59.1
Lalb_Chr09g0319841 Lupinus albus HOM05D000062 ORTHO05D008040 6.0e-06 54.7 44 56.8
Ciclev10004635m.g Citrus clementina HOM05D000062 ORTHO05D008040 7.9e-06 54.3 44 61.4
DCAR_030628 Daucus carota HOM05D000062 ORTHO05D008040 7.9e-06 54.3 44 56.8
TPR.G37867 Trifolium pratense HOM05D000062 ORTHO05D008040 7.9e-06 54.3 44 56.8


User provided reference genes

Program Settings