Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39709 Trifolium pratense HOM05D000181 ORTHO05D007018 3.0e-84 315.1 154 100.0
Psat1g063760 Pisum sativum HOM05D000181 ORTHO05D007018 6.8e-60 234.2 157 80.3
Ca_26511_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007018 1.9e-46 189.5 158 69.0
Medtr6g016600 Medicago truncatula HOM05D000181 ORTHO05D007018 6.0e-40 167.9 155 63.9
Glyma.13G049800 Glycine max HOM05D000181 ORTHO05D007018 7.3e-38 161.0 156 60.3
Lj2g0016349 Lotus japonicus HOM05D000181 ORTHO05D007018 2.0e-35 152.9 156 59.0
Lalb_Chr06g0174771 Lupinus albus HOM05D000181 ORTHO05D007018 8.4e-34 147.5 166 54.2
arahy.Tifrunner.gnm1.ann1.BFCK6T Arachis hypogaea HOM05D000181 ORTHO05D007018 2.7e-32 142.5 163 58.3
Phvul.004G047500 Phaseolus vulgaris HOM05D000181 ORTHO05D007018 2.7e-32 142.5 158 55.7
Glyma.19G040200 Glycine max HOM05D000181 ORTHO05D007018 4.6e-32 141.7 158 56.3
arahy.Tifrunner.gnm1.ann1.D3003A Arachis hypogaea HOM05D000181 ORTHO05D007018 1.3e-31 140.2 163 58.3
VMungo0464G0307 Vigna mungo HOM05D000181 ORTHO05D007018 1.5e-30 136.7 162 54.9
Lalb_Chr02g0158491 Lupinus albus HOM05D000181 ORTHO05D007018 1.7e-26 123.2 157 52.9
CANSAT64G0109 Cannabis sativa HOM05D000181 ORTHO05D007018 2.4e-17 92.8 161 39.1
Haze_14084 Corylus avellana HOM05D000181 ORTHO05D007018 1.3e-15 87.0 161 39.1
Prupe.3G243600 Prunus persica HOM05D000181 ORTHO05D007018 5.1e-15 85.1 163 39.9
Thecc.04G145500 Theobroma cacao HOM05D000181 ORTHO05D007018 5.6e-14 81.6 166 39.2
Gohir.A07G176200 Gossypium hirsutum HOM05D000181 ORTHO05D007018 2.1e-13 79.7 168 36.9
Gohir.D07G183300 Gossypium hirsutum HOM05D000181 ORTHO05D007018 4.8e-13 78.6 168 36.9
Gorai.001G203700 Gossypium raimondii HOM05D000181 ORTHO05D007018 6.2e-13 78.2 168 36.9
Manes.02G063800 Manihot esculenta HOM05D000181 ORTHO05D007018 6.2e-13 78.2 167 35.3
RcHm_v2.0_Chr2g0163931 Rosa chinensis HOM05D000181 ORTHO05D007018 8.1e-13 77.8 164 35.4
MD17G1070600 Malus domestica HOM05D000181 ORTHO05D007018 1.8e-12 76.6 165 37.0
Atru.chr8.784 Acer truncatum HOM05D000181 ORTHO05D007018 4.0e-12 75.5 155 40.0
Ciclev10011254m.g Citrus clementina HOM05D000181 ORTHO05D007018 9.0e-12 74.3 163 36.8
Cpa.g.sc652.5 Carica papaya HOM05D000181 ORTHO05D007018 1.7e-10 70.1 114 40.4
QL02p054271 Quercus lobata HOM05D000181 ORTHO05D007018 4.9e-10 68.6 165 35.2
PSO478G3628 Papaver somniferum HOM05D000181 ORTHO05D007018 8.4e-10 67.8 81 46.9
Potri.004G106500 Populus trichocarpa HOM05D000181 ORTHO05D007018 1.1e-09 67.4 125 39.2
FAN02G1925 Fragaria x ananassa HOM05D000181 ORTHO05D007018 1.4e-09 67.0 162 31.5
PSO017G5302 Papaver somniferum HOM05D000181 ORTHO05D007018 1.4e-09 67.0 81 48.1
FvH4_6g45740 Fragaria vesca HOM05D000181 ORTHO05D007018 3.2e-09 65.9 162 30.9
CiPaw.03G007200 Carya illinoinensis HOM05D000181 ORTHO05D007018 4.2e-09 65.5 155 36.8
FAN05G1104 Fragaria x ananassa HOM05D000181 ORTHO05D007018 7.1e-09 64.7 164 32.3
Dinv33902 Davidia involucrata HOM05D000181 ORTHO05D007018 9.3e-09 64.3 79 46.8
CSS0006259 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007018 1.6e-08 63.5 99 38.4
Sed0010173 Sechium edule HOM05D000181 ORTHO05D007018 1.6e-08 63.5 162 37.0
CsaV3_5G038890 Cucumis sativus L. HOM05D000181 ORTHO05D007018 2.1e-08 63.2 133 38.3
FAN09G2497 Fragaria x ananassa HOM05D000181 ORTHO05D007018 2.7e-08 62.8 162 30.2
FAN14G0934 Fragaria x ananassa HOM05D000181 ORTHO05D007018 2.7e-08 62.8 162 30.2
TWI34G1447 Tripterygium wilfordii HOM05D000181 ORTHO05D007018 6.0e-08 61.6 69 50.7
MD09G1080100 Malus domestica HOM05D000181 ORTHO05D007018 7.9e-08 61.2 158 32.3
MELO3C022077.2 Cucumis melo HOM05D000181 ORTHO05D007018 1.8e-07 60.1 133 36.8
ClCG00G004970 Citrullus lanatus HOM05D000181 ORTHO05D007018 3.9e-07 58.9 140 35.7
ClCG11G005130 Citrullus lanatus HOM05D000181 ORTHO05D007018 3.9e-07 58.9 140 35.7
Sabra04G0075600 Salix brachista HOM05D000181 ORTHO05D007018 5.1e-07 58.5 162 34.6
Lsat_1_v5_gn_3_94620 Lactuca sativa HOM05D000181 ORTHO05D007018 1.9e-06 56.6 99 37.4
Oeu032862.4 Olea europaea HOM05D000181 ORTHO05D007018 1.9e-06 56.6 97 40.2
Peaxi162Scf00479g00438 Petunia axillaris HOM05D000181 ORTHO05D007018 1.9e-06 56.6 83 43.4
TWI60G0429 Tripterygium wilfordii HOM05D000181 ORTHO05D007018 3.3e-06 55.8 139 29.5
vmacro18094 Vaccinium macrocarpon HOM05D000181 ORTHO05D007018 3.3e-06 55.8 110 37.3
AUR62039397 Chenopodium quinoa HOM05D000181 ORTHO05D007018 4.3e-06 55.5 99 41.4
Nitab4.5_0000612g0020 Nicotiana tabacum HOM05D000181 ORTHO05D007018 4.3e-06 55.5 78 47.4
Rhsim08G0080800 Rhododendron simsii HOM05D000181 ORTHO05D007018 4.3e-06 55.5 78 43.6
Sc14g0003360 Simmondsia chinensis HOM05D000181 ORTHO05D007018 4.3e-06 55.5 105 33.3
Nitab4.5_0012845g0010 Nicotiana tabacum HOM05D000181 ORTHO05D007018 5.6e-06 55.1 78 47.4
Eucgr.I02102 Eucalyptus grandis HOM05D000181 ORTHO05D007018 7.4e-06 54.7 165 33.3
MBI15_g22717_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007018 9.6e-06 54.3 99 38.4


User provided reference genes

Program Settings