Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39697 Trifolium pratense HOM05D001779 ORTHO05D001753 1.3e-83 313.2 176 100.0
Psat3g145680 Pisum sativum HOM05D001779 ORTHO05D001753 6.8e-48 194.5 143 76.9
Ca_07638_v3 Cicer arietinum L. HOM05D001779 ORTHO05D001753 6.0e-36 154.8 166 62.0
Lj1g0021736 Lotus japonicus HOM05D001779 ORTHO05D001753 7.3e-34 147.9 144 63.2
Medtr7g056613 Medicago truncatula HOM05D001779 ORTHO05D001753 1.3e-30 137.1 143 62.2
Glyma.08G352500 Glycine max HOM05D001779 ORTHO05D001753 1.1e-29 134.0 143 60.1
arahy.Tifrunner.gnm1.ann1.P8X82K Arachis hypogaea HOM05D001779 ORTHO05D001753 1.0e-27 127.5 143 55.9
arahy.Tifrunner.gnm1.ann1.X6Z628 Arachis hypogaea HOM05D001779 ORTHO05D001753 1.3e-27 127.1 138 56.5
Phvul.008G126700 Phaseolus vulgaris HOM05D001779 ORTHO05D001753 5.1e-27 125.2 154 55.2
Lalb_Chr19g0125661 Lupinus albus HOM05D001779 ORTHO05D001753 9.6e-26 120.9 88 78.4
Ciclev10019744m.g Citrus clementina HOM05D001779 ORTHO05D001753 9.3e-21 104.4 78 76.9
PGSC0003DMG400032206 Solanum tuberosum HOM05D001779 ORTHO05D001753 9.3e-21 104.4 97 64.9
VMungo1383G2648 Vigna mungo HOM05D001779 ORTHO05D001753 9.3e-21 104.4 154 49.4
Nitab4.5_0001568g0160 Nicotiana tabacum HOM05D001779 ORTHO05D001753 1.2e-20 104.0 138 50.0
Solyc01g006500.4 Solanum lycopersicum HOM05D001779 ORTHO05D001753 1.6e-20 103.6 91 64.8
Cpa.g.sc8.143 Carica papaya HOM05D001779 ORTHO05D001753 2.1e-20 103.2 116 57.8
Sopen01g002480 Solanum pennellii HOM05D001779 ORTHO05D001753 2.1e-20 103.2 91 64.8
CSS0033397 Camellia sinensis var. sinensis HOM05D001779 ORTHO05D001753 3.5e-20 102.4 138 52.2
ClCG09G008970 Citrullus lanatus HOM05D001779 ORTHO05D001753 4.6e-20 102.1 86 70.9
CiPaw.04G104900 Carya illinoinensis HOM05D001779 ORTHO05D001753 6.0e-20 101.7 119 53.8
Nitab4.5_0001146g0150 Nicotiana tabacum HOM05D001779 ORTHO05D001753 6.0e-20 101.7 138 50.0
DCAR_004720 Daucus carota HOM05D001779 ORTHO05D001753 7.8e-20 101.3 82 75.6
Manes.12G045500 Manihot esculenta HOM05D001779 ORTHO05D001753 7.8e-20 101.3 91 65.9
Eucgr.K02161 Eucalyptus grandis HOM05D001779 ORTHO05D001753 1.3e-19 100.5 94 64.9
THA.LOC104802670 Tarenaya hassleriana HOM05D001779 ORTHO05D001753 1.3e-19 100.5 143 46.9
MD10G1163400 Malus domestica HOM05D001779 ORTHO05D001753 1.7e-19 100.1 138 51.4
MELO3C021027.2 Cucumis melo HOM05D001779 ORTHO05D001753 3.0e-19 99.4 142 52.1
PGR044G1326 Punica granatum HOM05D001779 ORTHO05D001753 3.0e-19 99.4 100 64.0
Potri.002G243600 Populus trichocarpa HOM05D001779 ORTHO05D001753 5.1e-19 98.6 78 74.4
Sabra02G0185300 Salix brachista HOM05D002628 ORTHO05D002785 5.1e-19 98.6 78 74.4
AUR62001096 Chenopodium quinoa HOM05D001779 ORTHO05D001753 8.7e-19 97.8 136 52.9
AUR62008921 Chenopodium quinoa HOM05D001779 ORTHO05D001753 1.1e-18 97.4 143 51.0
Dinv12682 Davidia involucrata HOM05D001779 ORTHO05D001753 1.1e-18 97.4 91 65.9
Sp2g19140 Schrenkiella parvula HOM05D001779 ORTHO05D001753 1.1e-18 97.4 145 50.3
A06p38950 Brassica napus HOM05D001779 ORTHO05D001753 1.5e-18 97.1 145 47.6
BraA06t26809Z Brassica rapa HOM05D001779 ORTHO05D001753 1.5e-18 97.1 145 47.6
Cfa002578 Carpinus fangiana HOM05D001779 ORTHO05D001753 1.9e-18 96.7 93 65.6
Lj6A358T55 Lonicera japonica HOM05D001779 ORTHO05D001753 2.5e-18 96.3 97 61.9
CANSAT35G0239 Cannabis sativa HOM05D001779 ORTHO05D001753 3.3e-18 95.9 144 47.2
Thecc.01G224400 Theobroma cacao HOM05D001779 ORTHO05D001753 3.3e-18 95.9 93 63.4
EL10Ac7g17850 Beta vulgaris HOM05D001779 ORTHO05D001753 4.3e-18 95.5 141 51.8
Haze_24811 Corylus avellana HOM05D001779 ORTHO05D001753 5.6e-18 95.1 96 66.7
MBI07_g05481_MAGBIO Magnolia biondii HOM05D001779 ORTHO05D001753 7.3e-18 94.7 71 76.1
MSTRG.20959 Avicennia marina HOM05D001779 ORTHO05D001753 9.6e-18 94.4 136 51.5
Duzib138G0054 Durio zibethinus HOM05D001779 ORTHO05D001753 9.6e-18 94.4 93 63.4
Peaxi162Scf00403g00211 Petunia axillaris HOM05D001779 ORTHO05D001753 9.6e-18 94.4 95 60.0
Atru.chr5.2026 Acer truncatum HOM05D001779 ORTHO05D001753 1.3e-17 94.0 141 48.9
C07p39380 Brassica napus HOM05D001779 ORTHO05D001753 1.3e-17 94.0 145 47.6
BolC7t44458H Brassica oleracea HOM05D001779 ORTHO05D001753 1.3e-17 94.0 145 47.6
CsaV3_7G026080 Cucumis sativus L. HOM05D001779 ORTHO05D001753 1.3e-17 94.0 148 49.3
QL09p053959 Quercus lobata HOM05D001779 ORTHO05D001753 2.1e-17 93.2 92 60.9
Aa31sc37G30 Aethionema arabicum HOM05D001779 ORTHO05D001753 2.8e-17 92.8 152 47.4
PSO674G0008 Papaver somniferum HOM05D001779 ORTHO05D001753 2.8e-17 92.8 94 62.8
vmacro02765 Vaccinium macrocarpon HOM05D001779 ORTHO05D001753 2.8e-17 92.8 139 50.4
Cc01_g16930 Coffea canephora HOM05D001779 ORTHO05D001753 3.6e-17 92.4 143 47.6
HPP92_023347 Vanilla planifolia HOM05D001779 ORTHO05D001753 3.6e-17 92.4 65 72.3
Aqoxy5G00031 Aquilegia oxysepala HOM05D001779 ORTHO05D001753 4.8e-17 92.0 107 55.1
COL.COLO4_15672 Corchorus olitorius HOM05D001779 ORTHO05D001753 6.2e-17 91.7 148 46.6
Hund18390 Selenicereus undatus HOM05D001779 ORTHO05D001753 6.2e-17 91.7 71 67.6
TWI18G0520 Tripterygium wilfordii HOM05D001779 ORTHO05D001753 6.2e-17 91.7 138 48.6
Rhsim13G0046000 Rhododendron simsii HOM05D001779 ORTHO05D001753 1.1e-16 90.9 143 49.0
AT5G48730 Arabidopsis thaliana HOM05D001779 ORTHO05D001753 1.4e-16 90.5 143 46.2
FAN18G1972 Fragaria x ananassa HOM05D001779 ORTHO05D001753 1.4e-16 90.5 145 49.7
Prupe.8G201700 Prunus persica HOM05D001779 ORTHO05D001753 1.4e-16 90.5 86 65.1
FAN04G2077 Fragaria x ananassa HOM05D001779 ORTHO05D001753 1.8e-16 90.1 110 55.5
Thhalv10004021m.g Eutrema salsugineum HOM05D001779 ORTHO05D001753 2.4e-16 89.7 145 45.5
FAN08G2977 Fragaria x ananassa HOM05D001779 ORTHO05D001753 2.4e-16 89.7 93 64.5
PSO832G0330 Papaver somniferum HOM05D001779 ORTHO05D001753 2.4e-16 89.7 65 78.5
RcHm_v2.0_Chr7g0231531 Rosa chinensis HOM05D001779 ORTHO05D001753 2.4e-16 89.7 142 50.0
BcaC06g30763 Brassica carinata HOM05D001779 ORTHO05D001753 4.0e-16 89.0 145 48.3
Migut.D02488 Erythranthe guttata HOM05D001779 ORTHO05D001753 4.0e-16 89.0 84 64.3
FvH4_5g33190 Fragaria vesca HOM05D001779 ORTHO05D001753 4.0e-16 89.0 142 48.6
Gohir.A11G138700 Gossypium hirsutum HOM05D001779 ORTHO05D001753 4.0e-16 89.0 136 44.9
Gohir.D11G144900 Gossypium hirsutum HOM05D001779 ORTHO05D001753 4.0e-16 89.0 76 68.4
AL8G21830 Arabidopsis lyrata HOM05D001779 ORTHO05D001753 5.3e-16 88.6 145 45.5
BcaC06g30762 Brassica carinata HOM05D001779 ORTHO05D001753 6.9e-16 88.2 147 46.3
CAN.G649.15 Capsicum annuum HOM05D001779 ORTHO05D001753 6.9e-16 88.2 72 69.4
Oeu043135.1 Olea europaea HOM05D001779 ORTHO05D001753 1.2e-15 87.4 136 48.5
ATR0626G121 Amborella trichopoda HOM05D001779 ORTHO05D001753 1.5e-15 87.0 71 69.0
SGA_v2.0_scaffold171G38942 Striga asiatica HOM05D001779 ORTHO05D001753 1.5e-15 87.0 80 68.8
Nn1g07882 Nelumbo nucifera HOM05D001779 ORTHO05D001753 2.0e-15 86.7 92 64.1
Gorai.007G155400 Gossypium raimondii HOM05D001779 ORTHO05D001753 9.9e-15 84.3 140 45.7
Sed0015503 Sechium edule HOM05D001779 ORTHO05D001753 9.9e-15 84.3 118 52.5
CARHR183130 Cardamine hirsuta HOM05D001779 ORTHO05D001753 1.3e-14 84.0 140 45.7
Sc17g0002310 Simmondsia chinensis HOM05D001779 ORTHO05D001753 2.2e-14 83.2 143 46.9
Sc17g0002360 Simmondsia chinensis HOM05D001779 ORTHO05D001753 2.2e-14 83.2 143 46.9
TAR633G2615 Trochodendron aralioides HOM05D001779 ORTHO05D001753 2.2e-14 83.2 115 49.6
Carub.0008s0848 Capsella rubella HOM05D001779 ORTHO05D001753 4.9e-14 82.0 147 46.3
Lsat_1_v5_gn_8_89800 Lactuca sativa HOM05D001779 ORTHO05D001753 8.4e-14 81.3 119 51.3
SalBow6G6670 Salvia bowleyana HOM05D001779 ORTHO05D001753 8.4e-14 81.3 138 44.2
ECA236G0552 Erigeron canadensis HOM05D001779 ORTHO05D001753 2.4e-13 79.7 121 49.6
Os06g0172000 Oryza sativa ssp. japonica HOM05D001779 ORTHO05D001753 2.4e-13 79.7 65 67.7
GSVIVG01028689001 Vitis vinifera HOM05D001779 ORTHO05D001753 1.2e-12 77.4 126 46.0
SalBow6G7015 Salvia bowleyana HOM05D001779 ORTHO05D001753 1.6e-12 77.0 138 42.8
HanXRQChr04g0108171 Helianthus annuus HOM05D001779 ORTHO05D001753 2.1e-12 76.6 120 47.5
Zm00001eb281690 Zea mays HOM05D001779 ORTHO05D001753 2.1e-12 76.6 87 57.5
SEGI_26661 Sequoiadendron giganteum HOM05D001779 ORTHO05D001753 2.0e-07 60.1 59 61.0
Rhsim13G0045700 Rhododendron simsii HOM05D001779 ORTHO05D001753 2.2e-06 56.6 97 46.4


User provided reference genes

Program Settings