Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39545 Trifolium pratense HOM05D007230 ORTHO05D004756 4.1e-78 294.7 148 100.0
TPR.G13973 Trifolium pratense HOM05D007230 ORTHO05D004756 2.3e-44 182.6 128 71.9
Psat1g216160 Pisum sativum HOM05D010459 ORTHO05D004756 1.0e-36 157.1 136 61.8
Psat6g173880 Pisum sativum HOM05D010459 ORTHO05D004756 2.3e-36 156.0 115 65.2
SHI31302 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-30 135.6 140 55.7
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-29 132.1 141 54.6
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-29 131.0 141 53.9
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 7.8e-29 131.0 141 53.9
SHI11692 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-28 130.6 141 53.9
Ca_20123_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 1.3e-28 130.2 104 68.3
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-28 130.2 141 54.6
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 1.7e-28 129.8 141 53.2
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-28 129.4 141 52.5
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 3.0e-28 129.0 141 53.2
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-28 129.0 141 51.1
Potri.013G133550 Populus trichocarpa HOM05D010459 ORTHO05D004756 3.9e-28 128.6 150 48.0
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 3.9e-28 128.6 141 53.9
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-28 128.3 141 53.2
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 5.0e-28 128.3 141 52.5
SHI35844 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-28 128.3 141 53.9
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-28 127.9 141 53.2
SHI05604 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-28 127.5 141 51.8
SHI45862 Sapria himalayana HOM05D007230 ORTHO05D004756 8.6e-28 127.5 138 54.3
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-28 127.5 141 52.5
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-27 127.1 141 53.2
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-27 127.1 141 53.2
SHI11549 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-27 126.7 141 52.5
SHI11999 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-27 126.7 141 52.5
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-27 126.7 141 52.5
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-27 125.9 141 52.5
SHI45992 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-27 125.9 141 51.1
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 3.3e-27 125.6 128 55.5
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-27 125.2 138 53.6
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 5.6e-27 124.8 154 49.4
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-27 124.4 141 51.8
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-27 124.4 151 50.3
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 9.5e-27 124.0 141 51.8
Ca_07474_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 1.6e-26 123.2 93 72.0
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 6.2e-26 121.3 137 54.0
Lalb_Chr17g0347801 Lupinus albus HOM05D010459 ORTHO05D004756 1.1e-25 120.6 142 54.2
SHI09801 Sapria himalayana HOM05D007230 ORTHO05D004756 1.4e-25 120.2 141 48.2
SHI20212 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-25 120.2 115 60.0
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-25 119.4 141 50.4
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-24 116.7 123 50.4
SHI36442 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-24 116.7 141 51.1
Ca_07147_v3 Cicer arietinum L. HOM05D000002 ORTHO05D004756 7.5e-24 114.4 140 49.3
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 9.2e-22 107.5 118 49.2
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.6e-21 106.7 153 44.4
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.6e-21 106.7 153 44.4
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.6e-21 106.7 153 44.4
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 3.5e-21 105.5 153 43.8
CSS0040816 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-21 105.1 154 41.6
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 1.3e-20 103.6 105 60.0
COL.COLO4_28935 Corchorus olitorius HOM05D007230 ORTHO05D004756 1.7e-20 103.2 117 47.0
CSS0047076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 3.0e-20 102.4 137 43.8
SHI03218 Sapria himalayana HOM05D007230 ORTHO05D004756 5.1e-20 101.7 99 57.6
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-19 99.4 133 47.4
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 2.5e-19 99.4 104 56.7
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 3.3e-19 99.0 78 67.9
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 5.6e-19 98.2 105 58.1
CSS0043144 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.2e-18 97.1 137 40.9
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.4e-17 93.6 107 49.5
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 2.6e-16 89.4 77 63.6
CSS0020284 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-16 89.0 177 37.9
Ca_02897_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.5e-16 87.8 104 51.0
CSS0050399 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.7e-15 86.7 137 41.6
CSS0047175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-15 85.9 177 37.3
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 2.9e-15 85.9 62 69.4
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-13 79.3 96 43.8
CSS0002158 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.5e-13 79.0 59 64.4
CSS0034688 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.6e-13 78.6 78 55.1
CSS0049897 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 6.0e-13 78.2 61 62.3
CSS0049081 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 3.0e-12 75.9 74 52.7
CSS0037656 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.9e-11 73.2 69 53.6
Phvul.007G092900 Phaseolus vulgaris HOM05D010459 ORTHO05D004756 1.9e-11 73.2 89 47.2
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 1.9e-11 73.2 104 40.4
CSS0050464 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.5e-11 72.8 69 55.1
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 3.3e-11 72.4 149 32.2
Ca_27664_v3 Cicer arietinum L. HOM05D000002 ORTHO05D004756 4.3e-11 72.0 67 55.2
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 5.6e-11 71.6 153 30.7
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 7.3e-11 71.2 156 31.4
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 9.5e-11 70.9 149 31.5
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 9.5e-11 70.9 149 31.5
PSO675G6160 Papaver somniferum HOM05D000002 ORTHO05D004756 1.2e-10 70.5 130 32.3
CSS0011907 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.6e-10 70.1 75 48.0
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-10 69.3 149 32.2
CSS0047049 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 3.6e-10 68.9 75 48.0
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 3.6e-10 68.9 149 32.2
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.7e-10 68.6 96 38.5
vmacro05503 Vaccinium macrocarpon HOM05D002996 ORTHO05D004756 4.7e-10 68.6 78 51.3
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 6.2e-10 68.2 106 40.6
Aqoxy5G03695 Aquilegia oxysepala HOM05D000002 ORTHO05D004756 1.4e-09 67.0 68 52.9
Medtr5g075690 Medicago truncatula HOM05D004391 ORTHO05D005193 1.4e-09 67.0 59 61.0
PSO017G2245 Papaver somniferum HOM05D000002 ORTHO05D000001 1.4e-09 67.0 138 34.8
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.4e-09 67.0 101 39.6
RhsimUnG0057000 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.4e-09 67.0 124 37.1
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-09 66.6 110 32.7
Manes.14G134321 Manihot esculenta HOM05D007230 ORTHO05D004756 2.4e-09 66.2 110 38.2
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-09 65.9 109 33.9
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.0e-09 65.5 101 38.6
COL.COLO4_34392 Corchorus olitorius HOM05D007230 ORTHO05D004756 5.2e-09 65.1 96 34.4
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 5.2e-09 65.1 109 33.0
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 5.2e-09 65.1 109 33.0
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.2e-09 65.1 101 38.6
Ca_03884_v3 Cicer arietinum L. HOM05D007908 ORTHO05D009653 8.9e-09 64.3 92 39.1
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 8.9e-09 64.3 109 38.5
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 8.9e-09 64.3 132 35.6
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-08 63.9 88 39.8
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-08 63.9 88 39.8
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-08 63.9 88 39.8
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-08 63.9 88 39.8
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.2e-08 63.9 155 30.3
Hma1.2p1_1655F.1_g295950 Hydrangea macrophylla HOM05D007230 ORTHO05D004756 2.0e-08 63.2 77 45.5
PSO063G0989 Papaver somniferum HOM05D007230 ORTHO05D004756 2.0e-08 63.2 119 32.8
Rhsim13G0148200 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.0e-08 63.2 91 39.6
RhsimUnG0157400 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.0e-08 63.2 91 39.6
PSO063G3207 Papaver somniferum HOM05D007908 ORTHO05D009653 2.6e-08 62.8 97 40.2
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 2.6e-08 62.8 109 34.9
CiPaw.07G046700 Carya illinoinensis HOM05D007908 ORTHO05D009653 3.4e-08 62.4 95 37.9
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 3.4e-08 62.4 113 38.9
Rhsim08G0016000 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.4e-08 62.4 56 53.6
PSO170G3518 Papaver somniferum HOM05D007230 ORTHO05D004756 4.4e-08 62.0 68 48.5
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-08 62.0 113 33.6
QL09p018296 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-08 62.0 109 33.9
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 5.8e-08 61.6 61 59.0
SHI30744 Sapria himalayana HOM05D000002 ORTHO05D004756 5.8e-08 61.6 91 41.8
vmacro04005 Vaccinium macrocarpon HOM05D006655 ORTHO05D007986 5.8e-08 61.6 50 60.0
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 9.9e-08 60.8 75 50.7
TPR.G34217 Trifolium pratense HOM05D007908 ORTHO05D009653 9.9e-08 60.8 89 36.0
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.3e-07 60.5 139 31.7
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.7e-07 60.1 91 38.5
Ciclev10003571m.g Citrus clementina HOM05D007908 ORTHO05D009653 2.2e-07 59.7 90 35.6
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 2.2e-07 59.7 52 53.8
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 2.2e-07 59.7 100 31.0
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-07 59.7 140 30.0
QL10p009369 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-07 59.7 51 52.9
Cc04_g14940 Coffea canephora HOM05D000002 ORTHO05D000001 2.9e-07 59.3 131 32.8
CiPaw.14G112700 Carya illinoinensis HOM05D007908 ORTHO05D009653 3.8e-07 58.9 91 37.4
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.8e-07 58.9 105 31.4
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 3.8e-07 58.9 95 31.6
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 3.8e-07 58.9 111 31.5
CAN.G680.6 Capsicum annuum HOM05D007908 ORTHO05D009653 6.4e-07 58.2 88 40.9
COL.COLO4_21692 Corchorus olitorius HOM05D007230 ORTHO05D004756 6.4e-07 58.2 90 33.3
Rhsim11G0089400 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.4e-07 58.2 62 43.5
CSS0015235 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 8.4e-07 57.8 63 44.4
CSS0045907 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 8.4e-07 57.8 63 44.4
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.4e-07 57.8 134 30.6
PSO675G4469 Papaver somniferum HOM05D000002 ORTHO05D000001 8.4e-07 57.8 126 34.9
CAN.G680.8 Capsicum annuum HOM05D007908 ORTHO05D009653 1.1e-06 57.4 99 37.4
MELO3C029836.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-06 57.4 127 29.9
Potri.004G133001 Populus trichocarpa HOM05D007908 ORTHO05D009653 1.1e-06 57.4 95 35.8
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 1.4e-06 57.0 95 36.8
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 1.4e-06 57.0 95 31.6
Sopen03g008890 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 57.0 108 33.3
COL.COLO4_09335 Corchorus olitorius HOM05D007230 ORTHO05D004756 1.9e-06 56.6 64 43.8
TWI12G0323 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 1.9e-06 56.6 137 31.4
TWI77G0375 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 2.4e-06 56.2 121 33.9
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 3.2e-06 55.8 64 39.1
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 3.2e-06 55.8 75 48.0
CiPaw.04G138200 Carya illinoinensis HOM05D007908 ORTHO05D009653 4.2e-06 55.5 104 32.7
PGSC0003DMG400045810 Solanum tuberosum HOM05D007908 ORTHO05D009653 4.2e-06 55.5 99 34.3
CSS0046298 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 5.4e-06 55.1 140 32.1
CAN.G183.8 Capsicum annuum HOM05D007908 ORTHO05D009653 5.4e-06 55.1 103 36.9
FvH4_4g20921 Fragaria vesca HOM05D000002 ORTHO05D000001 5.4e-06 55.1 110 30.9
PSO210G6349 Papaver somniferum HOM05D007908 ORTHO05D009653 5.4e-06 55.1 86 37.2
PSO339G2863 Papaver somniferum HOM05D007908 ORTHO05D009653 5.4e-06 55.1 86 37.2
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 5.4e-06 55.1 95 30.5
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-06 55.1 56 46.4
ATR1125G035 Amborella trichopoda HOM05D027053 ORTHO05D026541 7.1e-06 54.7 137 31.4
PSO210G6560 Papaver somniferum HOM05D007908 ORTHO05D009653 7.1e-06 54.7 86 37.2
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 7.1e-06 54.7 100 35.0
Sopen10g016670 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-06 54.7 107 29.9
Hma1.2p1_1251F.1_g270340 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.2e-06 54.3 104 32.7
QL03p027161 Quercus lobata HOM05D000301 ORTHO05D000303 9.2e-06 54.3 104 35.6
TWI12G0087 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 9.2e-06 54.3 131 32.1
TWI12G0354 Tripterygium wilfordii HOM05D012930 ORTHO05D004756 9.2e-06 54.3 131 32.1


User provided reference genes

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