Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 5.4e-36 153.7 72 100.0
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 5.4e-36 153.7 72 100.0
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 7.1e-36 153.3 72 98.6
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 2.1e-35 151.8 72 97.2
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.3e-34 149.1 72 95.8
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 1.9e-33 145.2 72 93.1
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 5.6e-33 143.7 72 90.3
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 5.6e-33 143.7 71 91.5
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 1.6e-32 142.1 72 90.3
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 3.7e-32 141.0 72 88.9
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 3.7e-32 141.0 72 88.9
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 3.7e-32 141.0 72 88.9
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 3.7e-32 141.0 71 90.1
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 4.8e-32 140.6 72 90.3
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 4.8e-32 140.6 72 87.5
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 6.2e-32 140.2 72 90.3
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 8.1e-32 139.8 72 88.9
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 8.1e-32 139.8 72 88.9
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 8.1e-32 139.8 72 88.9
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 8.1e-32 139.8 72 90.3
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 8.1e-32 139.8 72 88.9
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 1.1e-31 139.4 72 88.9
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.8e-31 138.7 72 88.9
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.8e-31 138.7 72 88.9
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 1.8e-31 138.7 72 88.9
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.8e-31 138.7 72 87.5
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 2.4e-31 138.3 72 88.9
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 2.4e-31 138.3 72 88.9
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 2.4e-31 138.3 71 87.3
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 3.1e-31 137.9 72 87.5
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 3.1e-31 137.9 72 87.5
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 3.1e-31 137.9 72 87.5
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 4.0e-31 137.5 72 87.5
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 5.3e-31 137.1 71 87.3
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 6.9e-31 136.7 72 86.1
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 9.0e-31 136.3 71 90.1
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 9.0e-31 136.3 72 86.1
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 9.0e-31 136.3 72 84.7
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 1.2e-30 136.0 72 87.5
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 1.2e-30 136.0 72 86.1
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 1.2e-30 136.0 72 86.1
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 1.2e-30 136.0 72 86.1
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 2.0e-30 135.2 70 87.1
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 2.0e-30 135.2 72 84.7
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 2.6e-30 134.8 72 86.1
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 2.6e-30 134.8 72 86.1
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 2.6e-30 134.8 72 83.3
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 2.6e-30 134.8 71 88.7
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 3.4e-30 134.4 72 84.7
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 3.4e-30 134.4 72 84.7
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 3.4e-30 134.4 72 83.3
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 4.5e-30 134.0 72 81.9
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 4.5e-30 134.0 72 84.7
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 5.8e-30 133.7 70 85.7
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 5.8e-30 133.7 72 86.1
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 5.8e-30 133.7 72 83.3
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 7.6e-30 133.3 72 83.3
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 1.0e-29 132.9 72 86.1
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 1.7e-29 132.1 72 80.6
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 2.2e-29 131.7 72 81.9
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.2e-29 131.7 72 76.4
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 2.2e-29 131.7 72 81.9
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 2.2e-29 131.7 72 80.6
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 2.9e-29 131.3 70 82.9
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 3.8e-29 131.0 72 81.9
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.8e-29 131.0 72 83.3
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.8e-29 131.0 72 83.3
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 3.8e-29 131.0 72 83.3
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 3.8e-29 131.0 72 81.9
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 4.9e-29 130.6 71 83.1
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 4.9e-29 130.6 72 80.6
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 4.9e-29 130.6 72 79.2
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 6.5e-29 130.2 72 83.3
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 6.5e-29 130.2 72 83.3
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 6.5e-29 130.2 70 81.4
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 8.4e-29 129.8 71 85.9
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 8.4e-29 129.8 71 85.9
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 8.4e-29 129.8 71 85.9
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 8.4e-29 129.8 71 84.5
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 8.4e-29 129.8 72 81.9
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 8.4e-29 129.8 71 78.9
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 1.1e-28 129.4 71 85.9
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 1.1e-28 129.4 71 85.9
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 1.1e-28 129.4 72 81.9
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 1.1e-28 129.4 71 85.9
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 1.1e-28 129.4 71 80.3
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 1.9e-28 128.6 71 85.9
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 1.9e-28 128.6 73 84.9
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 1.9e-28 128.6 71 78.9
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 1.9e-28 128.6 72 81.9
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 1.9e-28 128.6 72 80.6
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 2.5e-28 128.3 71 84.5
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 3.2e-28 127.9 71 83.1
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 4.2e-28 127.5 71 78.9
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 7.1e-28 126.7 71 84.5
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 9.3e-28 126.3 71 81.7
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 1.2e-27 125.9 71 78.9
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 1.2e-27 125.9 72 80.6
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 1.2e-27 125.9 72 80.6
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 1.2e-27 125.9 72 77.8
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 1.2e-27 125.9 71 83.1
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 2.1e-27 125.2 72 77.8
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 2.1e-27 125.2 70 78.6
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 2.1e-27 125.2 71 80.3
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 3.9e-26 120.9 71 74.6
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 6.7e-26 120.2 65 84.6
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 8.7e-26 119.8 67 80.6
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 1.5e-25 119.0 72 72.2
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 5.7e-25 117.1 72 79.2
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.8e-24 114.0 71 67.6
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.8e-24 114.0 71 67.6
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.8e-24 114.0 71 67.6
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 5.3e-23 110.5 70 67.1
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 5.8e-22 107.1 58 81.0
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 2.2e-21 105.1 71 62.0
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 5.0e-21 104.0 64 67.2
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 4.2e-20 100.9 69 59.4
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 7.1e-20 100.1 69 58.0
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.6e-19 99.0 64 62.5
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 2.7e-19 98.2 64 62.5
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 3.5e-19 97.8 64 65.6
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 4.6e-19 97.4 72 55.6
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 5.1e-18 94.0 48 89.6
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 2.2e-16 88.6 60 58.3
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 1.4e-10 69.3 58 46.6
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 1.4e-07 59.3 36 72.2


User provided reference genes

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