Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39493 Trifolium pratense HOM05D014548 ORTHO05D016940 7.8e-109 397.1 198 100.0
Psat6g188320 Pisum sativum HOM05D014548 ORTHO05D016940 1.7e-47 193.4 202 52.5
Ca_10629_v3 Cicer arietinum L. HOM05D014548 ORTHO05D016940 4.8e-42 175.3 139 60.4
TPR.G39494 Trifolium pratense HOM05D014548 ORTHO05D016940 5.1e-36 155.2 218 45.0
TPR.G40257 Trifolium pratense HOM05D014548 ORTHO05D016940 9.7e-35 151.0 138 55.1
Lalb_Chr17g0341421 Lupinus albus HOM05D014548 ORTHO05D016940 1.6e-16 90.5 131 38.9
VMungo0434G0001 Vigna mungo HOM05D014548 ORTHO05D016940 3.8e-15 85.9 130 39.2
TPR.G30575 Trifolium pratense HOM05D014548 ORTHO05D016940 2.7e-13 79.7 154 37.0
Lj2g0016718 Lotus japonicus HOM05D014548 ORTHO05D016940 1.3e-10 70.9 116 32.8
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 3.1e-09 66.2 129 32.6
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 5.9e-08 62.0 126 32.5
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 7.7e-08 61.6 121 30.6
Atru.chr3.1552 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-07 59.7 125 30.4
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-07 59.7 132 30.3
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 3.8e-07 59.3 131 29.0
Atru.chr9.1443 Acer truncatum HOM05D000003 ORTHO05D000022 5.0e-07 58.9 149 26.8
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-06 57.0 188 22.9
SHI10451 Sapria himalayana HOM05D000155 ORTHO05D000022 2.5e-06 56.6 143 30.1
Thecc.03G101000 Theobroma cacao HOM05D007909 ORTHO05D000743 2.5e-06 56.6 149 30.2
PSO017G0823 Papaver somniferum HOM05D003407 ORTHO05D001026 5.6e-06 55.5 104 32.7
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 7.3e-06 55.1 128 28.9
Nitab4.5_0000780g0130 Nicotiana tabacum HOM05D012456 ORTHO05D000022 7.3e-06 55.1 118 29.7
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 9.5e-06 54.7 124 29.0
Sed0013469 Sechium edule HOM05D000003 ORTHO05D000167 9.5e-06 54.7 127 29.1


User provided reference genes

Program Settings