Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39302 Trifolium pratense HOM05D000151 ORTHO05D000074 2.7e-58 228.4 110 100.0
Medtr7g077620 Medicago truncatula HOM05D000151 ORTHO05D000074 6.0e-26 120.9 109 56.9
Medtr7g077650 Medicago truncatula HOM05D000151 ORTHO05D000074 3.3e-24 115.2 109 55.0
Medtr7g077660 Medicago truncatula HOM05D000151 ORTHO05D000074 2.8e-23 112.1 107 56.1
Medtr7g076100 Medicago truncatula HOM05D000151 ORTHO05D000074 1.2e-21 106.7 57 82.5
TPR.G4837 Trifolium pratense HOM05D000151 ORTHO05D000074 7.6e-21 104.0 107 46.7
Medtr5g082770 Medicago truncatula HOM05D000151 ORTHO05D000074 2.2e-20 102.4 103 50.5
Medtr1g016150 Medicago truncatula HOM05D000151 ORTHO05D000074 8.4e-20 100.5 109 47.7
Medtr1g108740 Medicago truncatula HOM05D000151 ORTHO05D000074 1.4e-19 99.8 105 48.6
TPR.G12009 Trifolium pratense HOM05D000151 ORTHO05D000074 9.2e-19 97.1 102 46.1
Psat2g032600 Pisum sativum HOM05D000151 ORTHO05D000074 2.1e-18 95.9 99 48.5
Psat2g031920 Pisum sativum HOM05D000151 ORTHO05D000074 3.5e-18 95.1 102 47.1
TPR.G33767 Trifolium pratense HOM05D000151 ORTHO05D000074 3.5e-18 95.1 102 46.1
Medtr5g038260 Medicago truncatula HOM05D000151 ORTHO05D000074 2.3e-17 92.4 100 47.0
Psat2g032560 Pisum sativum HOM05D000151 ORTHO05D000074 2.3e-17 92.4 99 48.5
TPR.G11302 Trifolium pratense HOM05D000151 ORTHO05D000074 2.3e-17 92.4 103 48.5
Medtr5g038230 Medicago truncatula HOM05D000151 ORTHO05D000074 3.0e-17 92.0 100 46.0
Psat0s3333g0080 Pisum sativum HOM05D000151 ORTHO05D000074 3.0e-17 92.0 102 45.1
Psat0s3333g0120 Pisum sativum HOM05D000151 ORTHO05D000074 3.0e-17 92.0 102 45.1
Medtr1g064570 Medicago truncatula HOM05D000151 ORTHO05D000074 3.9e-17 91.7 102 46.1
Psat1g155320 Pisum sativum HOM05D000151 ORTHO05D000074 1.1e-16 90.1 100 45.0
Ca_04730_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 1.9e-16 89.4 103 43.7
Ca_04705_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 2.5e-16 89.0 102 44.1
Lj6g0002609 Lotus japonicus HOM05D000151 ORTHO05D000074 3.3e-16 88.6 103 45.6
Psat5g179080 Pisum sativum HOM05D000151 ORTHO05D000074 3.3e-16 88.6 108 42.6
Lj2g0002671 Lotus japonicus HOM05D000151 ORTHO05D000074 9.6e-16 87.0 106 50.0
Psat2g125280 Pisum sativum HOM05D000151 ORTHO05D000074 9.6e-16 87.0 100 44.0
TPR.G18206 Trifolium pratense HOM05D000151 ORTHO05D000074 9.6e-16 87.0 99 42.4
Medtr1g108750 Medicago truncatula HOM05D000151 ORTHO05D000074 1.4e-11 73.2 43 72.1
FvH4_1g07660 Fragaria vesca HOM05D000151 ORTHO05D000074 4.6e-10 68.2 110 38.2
FAN19G1262 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.6e-10 68.2 110 38.2
TPR.G21838 Trifolium pratense HOM05D000151 ORTHO05D000074 3.9e-09 65.1 80 40.0
FAN23G0760 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.7e-09 63.9 102 37.3
MD13G1075200 Malus domestica HOM05D000151 ORTHO05D000074 2.5e-08 62.4 109 33.0
RcHm_v2.0_Chr2g0133991 Rosa chinensis HOM05D000151 ORTHO05D000074 2.5e-08 62.4 81 42.0
FvH4_4g30040 Fragaria vesca HOM05D000151 ORTHO05D000074 3.3e-08 62.0 81 44.4
FAN12G2137 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.3e-08 62.0 81 44.4
MD10G1231500 Malus domestica HOM05D000151 ORTHO05D000074 3.3e-08 62.0 104 38.5
FvH4_4g30110 Fragaria vesca HOM05D000151 ORTHO05D000074 4.3e-08 61.6 81 44.4
FAN07G2876 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.3e-08 61.6 81 44.4
FAN12G2490 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.3e-08 61.6 81 44.4
FAN01G1825 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.6e-08 61.2 101 38.6
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 7.3e-08 60.8 105 30.5
RcHm_v2.0_Chr2g0092531 Rosa chinensis HOM05D000151 ORTHO05D000074 7.3e-08 60.8 81 40.7
RcHm_v2.0_Chr6g0291671 Rosa chinensis HOM05D000151 ORTHO05D000074 7.3e-08 60.8 101 36.6
Sed0018947 Sechium edule HOM05D000151 ORTHO05D000074 7.3e-08 60.8 107 33.6
FAN26G0624 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.6e-08 60.5 102 36.3
FAN26G3184 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.6e-08 60.5 102 36.3
FAN06G1169 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.3e-07 60.1 101 38.6
MD10G1043600 Malus domestica HOM05D000151 ORTHO05D000074 1.3e-07 60.1 104 36.5
Dinv28403 Davidia involucrata HOM05D000151 ORTHO05D000074 2.1e-07 59.3 104 37.5
FAN19G2647 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.8e-07 58.9 106 38.7
FAN23G0944 Fragaria x ananassa HOM05D000113 ORTHO05D002571 2.8e-07 58.9 103 39.8
Cfa008697 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.6e-07 58.5 100 37.0
FvH4_4g30041 Fragaria vesca HOM05D000151 ORTHO05D000074 3.6e-07 58.5 78 43.6
TWI23G0794 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.6e-07 58.5 105 32.4
FvH4_1g05330 Fragaria vesca HOM05D000151 ORTHO05D000074 4.8e-07 58.2 102 35.3
FAN12G0706 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.8e-07 58.2 78 43.6
FAN28G0096 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.8e-07 58.2 106 33.0
Prupe.1G009400 Prunus persica HOM05D000151 ORTHO05D000074 6.2e-07 57.8 83 41.0
FvH4_4g29670 Fragaria vesca HOM05D000151 ORTHO05D000074 8.1e-07 57.4 106 36.8
RcHm_v2.0_Chr5g0020191 Rosa chinensis HOM05D000151 ORTHO05D000074 8.1e-07 57.4 108 32.4
FAN19G1512 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.1e-06 57.0 102 35.3
FAN19G0371 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.4e-06 56.6 102 34.3
Thecc.06G008300 Theobroma cacao HOM05D000151 ORTHO05D000074 1.4e-06 56.6 107 34.6
arahy.Tifrunner.gnm1.ann1.VXXK79 Arachis hypogaea HOM05D000151 ORTHO05D000074 1.8e-06 56.2 101 33.7
FvH4_1g17860 Fragaria vesca HOM05D000151 ORTHO05D000074 1.8e-06 56.2 106 32.1
QL10p065072 Quercus lobata HOM05D000190 ORTHO05D000113 1.8e-06 56.2 59 50.8
Aqoxy7G01775 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-06 55.8 101 28.7
FvH4_1g04440 Fragaria vesca HOM05D000151 ORTHO05D000074 2.4e-06 55.8 90 35.6
MD05G1250900 Malus domestica HOM05D000151 ORTHO05D000074 2.4e-06 55.8 105 35.2
RcHm_v2.0_Chr2g0108311 Rosa chinensis HOM05D000151 ORTHO05D000074 2.4e-06 55.8 103 32.0
Dinv28382 Davidia involucrata HOM05D000151 ORTHO05D000074 3.1e-06 55.5 99 28.3
Thecc.04G160800 Theobroma cacao HOM05D000151 ORTHO05D000074 3.1e-06 55.5 112 34.8
Prupe.5G169100 Prunus persica HOM05D000151 ORTHO05D000074 4.0e-06 55.1 87 37.9
RcHm_v2.0_Chr4g0417201 Rosa chinensis HOM05D000151 ORTHO05D000074 4.0e-06 55.1 80 40.0
FvH4_4g30240 Fragaria vesca HOM05D000151 ORTHO05D000074 5.3e-06 54.7 92 40.2
FAN02G1417 Fragaria x ananassa HOM05D003473 ORTHO05D003872 5.3e-06 54.7 98 30.6
FAN19G2485 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.3e-06 54.7 99 34.3
Prupe.5G168800 Prunus persica HOM05D000151 ORTHO05D000074 5.3e-06 54.7 58 50.0
Prupe.6G183700 Prunus persica HOM05D000151 ORTHO05D000074 5.3e-06 54.7 105 36.2
Thecc.05G050600 Theobroma cacao HOM05D000151 ORTHO05D000074 5.3e-06 54.7 107 33.6
FvH4_1g05332 Fragaria vesca HOM05D000151 ORTHO05D000074 6.9e-06 54.3 90 37.8
FvH4_6g01780 Fragaria vesca HOM05D000151 ORTHO05D000074 6.9e-06 54.3 76 36.8
Hma1.2p1_2038F.1_g312030 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 6.9e-06 54.3 102 31.4
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.9e-06 54.3 103 34.0
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 6.9e-06 54.3 100 31.0
Cc11_g10930 Coffea canephora HOM05D000151 ORTHO05D000074 9.0e-06 53.9 98 38.8
FAN15G2038 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-06 53.9 61 41.0
TWI56G0047 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 9.0e-06 53.9 98 31.6


User provided reference genes

Program Settings