Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3927 Trifolium pratense HOM05D003216 ORTHO05D002268 3.9e-75 284.6 136 100.0
TPR.G28618 Trifolium pratense HOM05D000593 ORTHO05D000562 1.9e-50 202.6 104 91.3
TPR.G37709 Trifolium pratense HOM05D003216 ORTHO05D000562 1.3e-49 199.9 105 84.8
TPR.G8671 Trifolium pratense HOM05D000593 ORTHO05D000562 1.3e-49 199.9 102 90.2
TPR.G22274 Trifolium pratense HOM05D003216 ORTHO05D004526 4.0e-40 168.3 89 88.8
TPR.G29741 Trifolium pratense HOM05D000593 ORTHO05D002268 5.3e-40 167.9 142 57.0
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 7.9e-36 154.1 117 59.8
TPR.G54 Trifolium pratense HOM05D003216 ORTHO05D002268 1.8e-32 142.9 76 88.2
TPR.G21191 Trifolium pratense HOM05D003216 ORTHO05D002268 3.2e-29 132.1 105 54.3
TPR.G20851 Trifolium pratense HOM05D000593 ORTHO05D000562 3.8e-22 108.6 63 79.4
TPR.G19405 Trifolium pratense HOM05D003216 ORTHO05D002268 6.5e-22 107.8 74 63.5
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 1.9e-21 106.3 121 41.3
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 4.2e-21 105.1 135 43.7
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 7.2e-21 104.4 122 41.0
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 1.6e-20 103.2 135 44.4
Medtr1g103800 Medicago truncatula HOM05D003216 ORTHO05D002268 1.0e-19 100.5 137 43.1
Medtr3g467680 Medicago truncatula HOM05D003216 ORTHO05D002268 8.8e-19 97.4 134 38.1
Medtr2g030885 Medicago truncatula HOM05D003216 ORTHO05D002268 6.3e-17 91.3 137 41.6
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-16 89.4 101 44.6
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 9.1e-16 87.4 98 43.9
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-15 86.7 129 34.1
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 3.4e-15 85.5 127 33.9
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 5.9e-15 84.7 109 38.5
Hma1.2p1_0353F.1_g133160 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.7e-14 83.2 131 32.8
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 5.0e-14 81.6 126 33.3
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 6.5e-14 81.3 159 32.7
Medtr8g020433 Medicago truncatula HOM05D000593 ORTHO05D004526 6.5e-14 81.3 130 39.2
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 8.5e-14 80.9 135 36.3
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.2e-13 79.0 121 34.7
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-13 79.0 85 41.2
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 3.2e-13 79.0 128 35.2
Ca_25222_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 4.7e-12 75.1 130 32.3
Medtr7g068370 Medicago truncatula HOM05D003216 ORTHO05D002268 4.7e-12 75.1 90 41.1
Hma1.2p1_0319F.1_g123940 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 6.1e-12 74.7 131 29.8
Ca_15677_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.4e-11 73.6 130 32.3
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.8e-11 73.2 121 35.5
Ca_05380_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.8e-11 73.2 130 30.8
Ca_18398_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.8e-11 73.2 130 30.0
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.3e-11 72.8 135 32.6
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 2.3e-11 72.8 135 34.1
Ca_06057_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 3.0e-11 72.4 130 31.5
Medtr1g072330 Medicago truncatula HOM05D003216 ORTHO05D002268 3.0e-11 72.4 109 38.5
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 3.0e-11 72.4 130 36.9
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.9e-11 72.0 132 31.1
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 6.7e-11 71.2 121 34.7
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 6.7e-11 71.2 129 34.1
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.0e-10 69.7 108 29.6
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.6e-10 69.3 135 31.1
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.6e-10 69.3 128 32.8
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-10 69.3 84 40.5
Medtr3g104430 Medicago truncatula HOM05D003216 ORTHO05D000562 3.3e-10 68.9 82 37.8
Ca_13605_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 5.7e-10 68.2 130 30.0
TPR.G14990 Trifolium pratense HOM05D003216 ORTHO05D002268 5.7e-10 68.2 123 30.9
TPR.G18522 Trifolium pratense HOM05D000593 ORTHO05D002268 5.7e-10 68.2 123 30.9
Ca_23377_v3 Cicer arietinum L. HOM05D000593 ORTHO05D002268 1.7e-09 66.6 128 31.2
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.2e-09 66.2 135 30.4
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 3.7e-09 65.5 129 33.3
Ca_01383_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.1e-08 63.9 102 30.4
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-08 63.9 134 30.6
Medtr1g099140 Medicago truncatula HOM05D000593 ORTHO05D000562 1.8e-08 63.2 73 39.7
CSS0025640 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.4e-08 62.8 135 28.9
Medtr3g044770 Medicago truncatula HOM05D003216 ORTHO05D002268 5.3e-08 61.6 70 37.1
Medtr7g067030 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-07 60.1 71 39.4
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.6e-07 59.3 128 27.3
Medtr1g094105 Medicago truncatula HOM05D000593 ORTHO05D000562 2.6e-07 59.3 79 38.0
Medtr8g028025 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-07 59.3 81 34.6
Ca_07719_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 4.5e-07 58.5 102 27.5
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 5.9e-07 58.2 107 29.9
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 7.7e-07 57.8 162 27.8
TWI12G0007 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.7e-07 57.8 121 33.1
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 1.0e-06 57.4 130 25.4
Ca_26997_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.3e-06 57.0 74 36.5
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 1.7e-06 56.6 32 87.5
TWI12G1095 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.2e-06 56.2 121 32.2
TWI38G2130 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.2e-06 56.2 129 31.8
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 3.8e-06 55.5 130 24.6
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 3.8e-06 55.5 130 24.6
Medtr5g413325 Medicago truncatula HOM05D003216 ORTHO05D002268 3.8e-06 55.5 136 33.8
TWI56G1041 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.5e-06 54.7 125 31.2


User provided reference genes

Program Settings