Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39239 Trifolium pratense HOM05D001860 ORTHO05D004239 2.6e-95 352.1 179 100.0
Medtr5g041750 Medicago truncatula HOM05D001860 ORTHO05D004239 6.2e-65 251.1 146 82.2
Ca_04821_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004239 3.1e-56 222.2 137 75.2
Psat2g116800 Pisum sativum HOM05D001860 ORTHO05D004239 1.9e-53 213.0 137 75.9
arahy.Tifrunner.gnm1.ann1.A2Z21V Arachis hypogaea HOM05D001860 ORTHO05D004239 1.0e-46 190.7 139 69.1
arahy.Tifrunner.gnm1.ann1.RS14VD Arachis hypogaea HOM05D001860 ORTHO05D004239 1.3e-46 190.3 138 69.6
Haze_11993 Corylus avellana HOM05D001860 ORTHO05D004239 1.4e-45 186.8 140 66.4
Duzib268G0034 Durio zibethinus HOM05D001860 ORTHO05D004239 3.3e-42 175.6 139 63.3
ClCG05G024140 Citrullus lanatus HOM05D001860 ORTHO05D004239 1.2e-39 167.2 137 62.0
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 1.5e-39 166.8 140 60.0
TWI79G1540 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 4.5e-39 165.2 158 58.2
CsaV3_5G032880 Cucumis sativus L. HOM05D001860 ORTHO05D004239 1.7e-38 163.3 154 56.5
Hma1.2p1_1079F.1_g254980 Hydrangea macrophylla HOM05D001860 ORTHO05D004239 7.2e-37 157.9 136 60.3
Migut.L01274 Erythranthe guttata HOM05D001860 ORTHO05D004239 9.4e-37 157.5 143 58.0
Eucgr.B03212 Eucalyptus grandis HOM05D001860 ORTHO05D004239 9.4e-37 157.5 138 60.1
Lsat_1_v5_gn_3_52080 Lactuca sativa HOM05D001860 ORTHO05D004239 2.1e-36 156.4 137 58.4
Rhsim12G0064500 Rhododendron simsii HOM05D001860 ORTHO05D004239 6.1e-36 154.8 135 58.5
vmacro01266 Vaccinium macrocarpon HOM05D001860 ORTHO05D004239 1.8e-35 153.3 134 53.7
Sed0006733 Sechium edule HOM05D001860 ORTHO05D004239 1.1e-34 150.6 153 53.6
Lsat_1_v5_gn_3_52060 Lactuca sativa HOM05D001860 ORTHO05D004239 4.8e-33 145.2 129 58.9
Lj2g0002980 Lotus japonicus HOM05D001860 ORTHO05D004239 4.8e-33 145.2 111 64.0
SGA_v2.0_scaffold172G38958 Striga asiatica HOM05D001860 ORTHO05D004239 4.8e-33 145.2 140 57.1
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 8.2e-33 144.4 147 53.1
Nitab4.5_0004623g0030 Nicotiana tabacum HOM05D001860 ORTHO05D004239 4.1e-32 142.1 128 59.4
ECA233G2043 Erigeron canadensis HOM05D001860 ORTHO05D004239 5.3e-32 141.7 133 54.9
Glyma.01G050400 Glycine max HOM05D001860 ORTHO05D004239 5.3e-32 141.7 113 63.7
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.6e-31 139.4 139 54.7
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.6e-31 139.4 147 52.4
Glyma.02G109200 Glycine max HOM05D001860 ORTHO05D004239 4.5e-31 138.7 113 63.7
Oeu028274.1 Olea europaea HOM05D001860 ORTHO05D004239 5.9e-31 138.3 128 57.0
PGR119G0060 Punica granatum HOM05D001860 ORTHO05D004239 5.9e-31 138.3 139 53.2
Prupe.1G276800 Prunus persica HOM05D001860 ORTHO05D004239 7.7e-31 137.9 122 57.4
Actinidia33208 Actinidia chinensis HOM05D001860 ORTHO05D004239 1.0e-30 137.5 125 56.8
Phvul.002G083400 Phaseolus vulgaris HOM05D001860 ORTHO05D004239 2.9e-30 136.0 113 61.1
QL03p068530 Quercus lobata HOM05D001860 ORTHO05D004239 5.0e-30 135.2 126 56.3
VMungo1215G3190 Vigna mungo HOM05D001860 ORTHO05D004239 2.5e-29 132.9 106 64.2
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 4.7e-28 128.6 111 62.2
TWI75G1461 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 1.8e-27 126.7 110 61.8
MD13G1070100 Malus domestica HOM05D001860 ORTHO05D004239 1.1e-26 124.0 110 58.2
MD16G1070500 Malus domestica HOM05D001860 ORTHO05D004239 2.0e-26 123.2 111 60.4
THA.LOC104805168 Tarenaya hassleriana HOM05D001860 ORTHO05D004239 1.7e-25 120.2 133 45.9
Gohir.A13G076600 Gossypium hirsutum HOM05D001860 ORTHO05D004239 2.2e-25 119.8 113 54.9
Dinv34137 Davidia involucrata HOM05D001860 ORTHO05D004239 2.8e-25 119.4 111 55.9
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 3.7e-25 119.0 119 52.9
Gohir.D13G076300 Gossypium hirsutum HOM05D001860 ORTHO05D004239 4.8e-25 118.6 113 54.9
Lj6A786T63 Lonicera japonica HOM05D001860 ORTHO05D004239 6.3e-25 118.2 127 50.4
Ciclev10031680m.g Citrus clementina HOM05D001860 ORTHO05D004239 8.2e-25 117.9 111 54.1
TWI31G0976 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 1.1e-24 117.5 132 53.0
CANSAT64G2374 Cannabis sativa HOM05D001860 ORTHO05D004239 2.4e-24 116.3 110 55.5
Actinidia19882 Actinidia chinensis HOM05D001860 ORTHO05D004239 1.2e-23 114.0 121 45.5
Peaxi162Scf00222g00063 Petunia axillaris HOM05D001860 ORTHO05D004239 5.9e-23 111.7 105 56.2
ECA246G2415 Erigeron canadensis HOM05D001860 ORTHO05D004239 7.7e-23 111.3 111 52.3
HanXRQChr17g0545271 Helianthus annuus HOM05D001860 ORTHO05D004239 1.0e-22 110.9 111 53.2
MSTRG.714 Avicennia marina HOM05D001860 ORTHO05D004239 2.2e-22 109.8 105 57.1
Sopen05g003680 Solanum pennellii HOM05D001860 ORTHO05D004239 1.9e-21 106.7 105 53.3
PGSC0003DMG400018432 Solanum tuberosum HOM05D001860 ORTHO05D004239 1.9e-21 106.7 105 53.3
Nitab4.5_0000040g0150 Nicotiana tabacum HOM05D001860 ORTHO05D004239 4.2e-21 105.5 106 55.7
HanXRQChr08g0210801 Helianthus annuus HOM05D001860 ORTHO05D004239 5.5e-21 105.1 105 51.4
CAN.G1596.4 Capsicum annuum HOM05D001860 ORTHO05D004239 9.4e-21 104.4 104 52.9
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 1.2e-20 104.0 95 58.9
AUR62005815 Chenopodium quinoa HOM05D001860 ORTHO05D004239 1.4e-19 100.5 109 44.0
AUR62032809 Chenopodium quinoa HOM05D001860 ORTHO05D004239 2.3e-19 99.8 110 43.6
EL10Ac6g13235 Beta vulgaris HOM05D001860 ORTHO05D004239 1.2e-18 97.4 110 43.6
Os10g0406200 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004239 1.7e-17 93.6 138 42.8
Sc11g0002050 Simmondsia chinensis HOM05D001860 ORTHO05D004239 2.8e-17 92.8 110 45.5
TAR315G0003 Trochodendron aralioides HOM05D001860 ORTHO05D004239 8.3e-17 91.3 113 49.6
Actinidia12295 Actinidia chinensis HOM05D001860 ORTHO05D004239 1.1e-16 90.9 104 50.0
TAR622G0370 Trochodendron aralioides HOM05D001860 ORTHO05D004239 1.1e-16 90.9 113 47.8
Hund25223 Selenicereus undatus HOM05D001860 ORTHO05D004239 1.2e-15 87.4 106 42.5
Cpa.g.sc350.3 Carica papaya HOM05D001860 ORTHO05D004239 2.7e-15 86.3 115 44.3
TAR374G0160 Trochodendron aralioides HOM05D000974 ORTHO05D004239 2.7e-15 86.3 118 45.8
Zm00001eb223270 Zea mays HOM05D001860 ORTHO05D004239 2.7e-15 86.3 137 40.1
MBI05_g10767_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004239 5.9e-15 85.1 115 43.5
Thecc.02G343600 Theobroma cacao HOM05D001860 ORTHO05D004239 1.7e-14 83.6 112 43.8
Aqoxy3G03435 Aquilegia oxysepala HOM05D001860 ORTHO05D004239 1.5e-13 80.5 113 45.1
Manes.05G104000 Manihot esculenta HOM05D001860 ORTHO05D004239 1.9e-13 80.1 110 42.7
AagrBONN_evm.TU.Sc2ySwM_344.4323 Anthoceros agrestis HOM05D001860 ORTHO05D004239 1.2e-12 77.4 137 35.8
PSO339G1927 Papaver somniferum HOM05D001860 ORTHO05D004239 2.1e-12 76.6 126 40.5
Duzib251G0636 Durio zibethinus HOM05D001860 ORTHO05D004239 4.7e-12 75.5 112 42.0
SEGI_36747 Sequoiadendron giganteum HOM05D001860 ORTHO05D004239 6.1e-12 75.1 132 38.6
Dinv14593 Davidia involucrata HOM05D001860 ORTHO05D004239 8.0e-12 74.7 125 41.6
Thhalv10008532m.g Eutrema salsugineum HOM05D001860 ORTHO05D004239 1.0e-11 74.3 68 54.4
Sp1g12520 Schrenkiella parvula HOM05D001860 ORTHO05D004239 1.8e-11 73.6 68 55.9
Ah.03g134870 Amaranthus hybridus HOM05D001860 ORTHO05D004239 5.2e-11 72.0 71 49.3
Oeu055107.1 Olea europaea HOM05D001860 ORTHO05D004239 6.8e-11 71.6 74 45.9
Atru.chr11.1761 Acer truncatum HOM05D001860 ORTHO05D004239 8.8e-11 71.2 67 59.7
BcaC07g41592 Brassica carinata HOM05D001860 ORTHO05D004239 8.8e-11 71.2 68 51.5
BcaC07g41595 Brassica carinata HOM05D001860 ORTHO05D004239 8.8e-11 71.2 68 51.5
A09p62390 Brassica napus HOM05D001860 ORTHO05D004239 8.8e-11 71.2 68 51.5
BraA09t41604Z Brassica rapa HOM05D001860 ORTHO05D004239 8.8e-11 71.2 68 51.5
CARHR014580 Cardamine hirsuta HOM05D001860 ORTHO05D004239 8.8e-11 71.2 75 49.3
Cpa.g.sc51.86 Carica papaya HOM05D001860 ORTHO05D004239 8.8e-11 71.2 124 39.5
AL1G26050 Arabidopsis lyrata HOM05D001860 ORTHO05D004239 1.2e-10 70.9 68 52.9
BcaB08g34374 Brassica carinata HOM05D001860 ORTHO05D004239 2.0e-10 70.1 68 51.5
C08p45960 Brassica napus HOM05D001860 ORTHO05D004239 2.0e-10 70.1 68 50.0
BolC8t52147H Brassica oleracea HOM05D001860 ORTHO05D004239 2.0e-10 70.1 68 50.0
TAR369G0797 Trochodendron aralioides HOM05D001860 ORTHO05D004239 3.4e-10 69.3 108 38.0
MBI19_g24078_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004239 4.4e-10 68.9 104 40.4
Nn2g15907 Nelumbo nucifera HOM05D001860 ORTHO05D004239 4.4e-10 68.9 97 47.4
TAR623G1369 Trochodendron aralioides HOM05D001860 ORTHO05D004239 4.4e-10 68.9 114 36.8
Carub.0001s1385 Capsella rubella HOM05D001860 ORTHO05D004239 5.7e-10 68.6 68 51.5
BcaC05g25315 Brassica carinata HOM05D001860 ORTHO05D004239 7.5e-10 68.2 69 53.6
C05p11970 Brassica napus HOM05D001860 ORTHO05D004239 7.5e-10 68.2 69 53.6
BolC5t29953H Brassica oleracea HOM05D001860 ORTHO05D004239 7.5e-10 68.2 69 53.6
AT1G14180 Arabidopsis thaliana HOM05D001860 ORTHO05D004239 1.3e-09 67.4 68 51.5
DCAR_013696 Daucus carota HOM05D001860 ORTHO05D004239 2.2e-09 66.6 134 36.6
Lj2A356T44 Lonicera japonica HOM05D001860 ORTHO05D004239 2.8e-09 66.2 113 38.1
A06p10170 Brassica napus HOM05D001860 ORTHO05D004239 8.3e-09 64.7 69 53.6
Nn7g35793 Nelumbo nucifera HOM05D001860 ORTHO05D004239 1.4e-08 63.9 93 43.0
Pp3c19_13250 Physcomitrium patens HOM05D001507 ORTHO05D004239 1.4e-08 63.9 112 39.3
BraA06t24201Z Brassica rapa HOM05D001860 ORTHO05D004239 4.1e-08 62.4 69 52.2
Duzib128G1505 Durio zibethinus HOM05D001860 ORTHO05D004239 9.1e-08 61.2 90 42.2
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 5.9e-07 58.5 116 36.2
ATR0564G267 Amborella trichopoda HOM05D001860 ORTHO05D004239 1.7e-06 57.0 106 39.6
Gohir.A11G239600 Gossypium hirsutum HOM05D001860 ORTHO05D004239 2.9e-06 56.2 91 39.6
Gorai.007G267000 Gossypium raimondii HOM05D001860 ORTHO05D004239 2.9e-06 56.2 91 39.6


User provided reference genes

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