Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 3.4e-110 401.7 211 100.0
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 2.3e-58 229.6 247 58.3
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 8.7e-58 227.6 246 57.7
TPR.G39060 Trifolium pratense HOM05D007214 ORTHO05D008907 3.2e-52 209.1 143 80.4
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 7.6e-46 188.0 251 49.0
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 2.2e-45 186.4 246 48.0
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.4e-44 183.7 244 46.7
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 3.2e-44 182.6 241 48.5
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 3.5e-43 179.1 211 55.0
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 2.3e-34 149.8 247 41.7
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 8.8e-34 147.9 247 41.7
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 7.4e-33 144.8 248 41.1
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.5e-25 120.6 246 37.8
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 7.4e-25 118.2 165 47.9
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 4.5e-22 109.0 243 35.4
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.7e-21 107.1 245 35.1
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 2.2e-21 106.7 242 34.7
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 7.2e-20 101.7 236 32.6
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 8.0e-19 98.2 182 34.1
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.1e-17 94.4 210 36.2
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 3.3e-17 92.8 250 32.4
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 3.3e-17 92.8 222 30.6
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 7.5e-17 91.7 240 32.9
Psat3g176600 Pisum sativum HOM05D007214 ORTHO05D008907 4.1e-15 85.9 59 76.3
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 9.1e-15 84.7 235 30.2
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 5.9e-14 82.0 278 26.3
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 1.3e-13 80.9 239 28.0
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 2.9e-13 79.7 241 27.4
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 3.8e-13 79.3 239 28.0
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 6.5e-13 78.6 247 30.0
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 1.1e-12 77.8 244 31.6
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 1.5e-12 77.4 241 29.5
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 3.2e-12 76.3 242 30.6
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 3.6e-11 72.8 254 24.8
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 4.7e-11 72.4 244 29.9
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 6.1e-11 72.0 239 25.1
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 8.0e-11 71.6 211 29.4
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 1.4e-10 70.9 245 27.8
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 1.8e-10 70.5 80 47.5
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 3.0e-10 69.7 245 26.1
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 5.2e-10 68.9 170 33.5
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 5.2e-10 68.9 222 26.6
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 2.0e-09 67.0 193 32.1
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 5.7e-09 65.5 77 44.2
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 2.8e-08 63.2 248 27.4
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 4.8e-08 62.4 226 28.3
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 1.4e-07 60.8 117 33.3
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 1.4e-07 60.8 246 28.0
FAN05G0748 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.4e-07 60.1 74 40.5
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 4.1e-07 59.3 63 47.6
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 7.0e-07 58.5 99 35.4
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 9.1e-07 58.2 71 43.7
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 1.2e-06 57.8 181 30.9
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 3.5e-06 56.2 241 25.3
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 3.5e-06 56.2 98 34.7
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 4.5e-06 55.8 60 45.0
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 4.5e-06 55.8 238 22.7


User provided reference genes

Program Settings