Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3905 Trifolium pratense HOM05D000092 ORTHO05D000042 9.2e-104 380.2 186 100.0
TPR.G29456 Trifolium pratense HOM05D000092 ORTHO05D000042 6.9e-67 257.7 187 71.1
TPR.G27561 Trifolium pratense HOM05D000092 ORTHO05D000042 5.0e-65 251.5 192 70.8
TPR.G14434 Trifolium pratense HOM05D000092 ORTHO05D000042 8.5e-65 250.8 186 70.4
Ca_26138_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 5.3e-59 231.5 184 65.2
Medtr3g053200 Medicago truncatula HOM05D000092 ORTHO05D000042 2.5e-56 222.6 186 63.4
Medtr3g053180 Medicago truncatula HOM05D000092 ORTHO05D000042 4.4e-53 211.8 186 60.8
Psat5g173520 Pisum sativum HOM05D000092 ORTHO05D000042 5.3e-51 204.9 185 57.8
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 1.4e-38 163.7 98 81.6
Ca_22912_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 6.7e-38 161.4 190 48.4
Ca_22913_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 6.7e-38 161.4 190 48.4
TPR.G1015 Trifolium pratense HOM05D000092 ORTHO05D000001 1.1e-35 154.1 189 45.0
Medtr3g055210 Medicago truncatula HOM05D000092 ORTHO05D000042 7.0e-35 151.4 189 47.1
Medtr3g055230 Medicago truncatula HOM05D000092 ORTHO05D000042 7.0e-35 151.4 193 46.1
Medtr8g464870 Medicago truncatula HOM05D000092 ORTHO05D000042 1.8e-30 136.7 189 43.4
TPR.G39468 Trifolium pratense HOM05D000092 ORTHO05D000042 4.0e-30 135.6 103 71.8
arahy.Tifrunner.gnm1.ann1.332RDU Arachis hypogaea HOM05D000092 ORTHO05D000042 1.7e-28 130.2 206 40.3
arahy.Tifrunner.gnm1.ann1.C8PGGG Arachis hypogaea HOM05D000092 ORTHO05D000042 3.7e-28 129.0 206 39.8
TPR.G24629 Trifolium pratense HOM05D000092 ORTHO05D001102 3.7e-28 129.0 77 81.8
arahy.Tifrunner.gnm1.ann1.8ZM026 Arachis hypogaea HOM05D000092 ORTHO05D000042 3.5e-26 122.5 178 42.7
Lalb_Chr04g0248501 Lupinus albus HOM05D000092 ORTHO05D000042 4.2e-24 115.5 204 37.3
TPR.G7419 Trifolium pratense HOM05D000092 ORTHO05D000042 7.3e-16 88.2 43 95.3
Medtr3g062220 Medicago truncatula HOM05D000092 ORTHO05D000042 5.2e-14 82.0 193 33.7
Lalb_Chr04g0250161 Lupinus albus HOM05D000092 ORTHO05D000042 6.8e-14 81.6 202 31.7
Medtr3g467640 Medicago truncatula HOM05D000092 ORTHO05D000042 2.6e-13 79.7 191 32.5
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 9.8e-13 77.8 191 32.5
Glyma.14G205300 Glycine max HOM05D000092 ORTHO05D000042 1.3e-12 77.4 206 34.5
Lj6g0021728 Lotus japonicus HOM05D000092 ORTHO05D000042 1.3e-12 77.4 206 30.1
Glyma.14G205000 Glycine max HOM05D000092 ORTHO05D000042 1.7e-12 77.0 201 35.3
Psat5g173640 Pisum sativum HOM05D000092 ORTHO05D000042 1.7e-12 77.0 54 66.7
Medtr3g062020 Medicago truncatula HOM05D000092 ORTHO05D000042 2.2e-12 76.6 190 33.7
TPR.G25642 Trifolium pratense HOM05D000092 ORTHO05D011874 2.9e-12 76.3 168 32.7
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 3.7e-12 75.9 191 33.0
Psat5g156160 Pisum sativum HOM05D000092 ORTHO05D000042 3.7e-12 75.9 190 32.1
TPR.G5820 Trifolium pratense HOM05D000092 ORTHO05D005910 3.7e-12 75.9 188 32.4
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 3.7e-12 75.9 197 32.5
Ca_06449_v3 Cicer arietinum L. HOM05D000092 ORTHO05D011874 8.3e-12 74.7 193 33.7
Medtr3g466580 Medicago truncatula HOM05D000092 ORTHO05D000042 1.1e-11 74.3 192 30.7
Glyma.14G204700 Glycine max HOM05D000092 ORTHO05D000042 1.4e-11 73.9 206 34.5
Medtr3g466620 Medicago truncatula HOM05D000092 ORTHO05D000042 1.4e-11 73.9 182 31.9
Medtr7g026250 Medicago truncatula HOM05D000092 ORTHO05D000042 3.2e-11 72.8 191 31.9
Phvul.008G247200 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 3.2e-11 72.8 203 31.5
Ca_22251_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 4.1e-11 72.4 94 43.6
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 4.1e-11 72.4 192 33.3
VMungo0647G0184 Vigna mungo HOM05D000092 ORTHO05D000042 4.1e-11 72.4 212 34.4
Medtr3g062090 Medicago truncatula HOM05D000092 ORTHO05D013095 5.4e-11 72.0 189 30.2
Glyma.14G186600 Glycine max HOM05D000092 ORTHO05D000042 9.2e-11 71.2 201 33.3
Ca_12578_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 1.2e-10 70.9 203 28.6
Medtr5g092190 Medicago truncatula HOM05D000092 ORTHO05D000042 1.2e-10 70.9 173 32.9
Glyma.14G206500 Glycine max HOM05D000092 ORTHO05D000042 1.6e-10 70.5 202 33.7
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.6e-10 70.5 191 28.8
Medtr3g062990 Medicago truncatula HOM05D000092 ORTHO05D000042 1.6e-10 70.5 193 30.1
Phvul.008G247300 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 1.6e-10 70.5 208 30.3
Glyma.12G136700 Glycine max HOM05D000092 ORTHO05D000042 2.0e-10 70.1 202 32.2
Medtr1g031830 Medicago truncatula HOM05D000092 ORTHO05D000042 2.0e-10 70.1 203 29.1
Glyma.14G206900 Glycine max HOM05D000092 ORTHO05D000042 3.5e-10 69.3 204 32.8
Phvul.008G246500 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 3.5e-10 69.3 209 30.1
Psat2g013640 Pisum sativum HOM05D000092 ORTHO05D000042 3.5e-10 69.3 178 32.6
Phvul.008G245100 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 4.6e-10 68.9 200 30.5
Medtr3g062970 Medicago truncatula HOM05D000092 ORTHO05D000042 6.0e-10 68.6 193 30.6
Medtr5g085400 Medicago truncatula HOM05D000092 ORTHO05D000042 6.0e-10 68.6 168 31.5
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 1.0e-09 67.8 192 31.2
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 1.3e-09 67.4 168 33.9
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 1.3e-09 67.4 168 33.9
Medtr3g451650 Medicago truncatula HOM05D000092 ORTHO05D000042 2.3e-09 66.6 166 30.7
Phvul.008G247000 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 5.0e-09 65.5 204 30.4
Medtr1344s0010 Medicago truncatula HOM05D000092 ORTHO05D000042 6.6e-09 65.1 165 30.9
Medtr3g048690 Medicago truncatula HOM05D000092 ORTHO05D000042 8.6e-09 64.7 189 28.6
VMungo0331G0794 Vigna mungo HOM05D000092 ORTHO05D000042 8.6e-09 64.7 197 28.9
Glyma.14G204600 Glycine max HOM05D000092 ORTHO05D000042 1.5e-08 63.9 219 30.6
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-08 63.9 194 30.4
Medtr4g027125 Medicago truncatula HOM05D000092 ORTHO05D000042 1.9e-08 63.5 189 29.6
Medtr0043s0110 Medicago truncatula HOM05D000092 ORTHO05D000042 2.5e-08 63.2 163 30.1
Phvul.008G244500 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 2.5e-08 63.2 204 29.9
Medtr0067s0070 Medicago truncatula HOM05D000092 ORTHO05D000042 3.3e-08 62.8 183 27.9
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 4.3e-08 62.4 191 31.4
Psat5g149840 Pisum sativum HOM05D000092 ORTHO05D000042 5.6e-08 62.0 193 30.6
LjContig00141g0025728 Lotus japonicus HOM05D000092 ORTHO05D011874 7.3e-08 61.6 196 30.1
Medtr0854s0010 Medicago truncatula HOM05D000092 ORTHO05D000042 7.3e-08 61.6 194 30.4
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 7.3e-08 61.6 191 29.3
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 7.3e-08 61.6 189 28.0
Lj1g0016459 Lotus japonicus HOM05D000092 ORTHO05D000042 9.5e-08 61.2 197 27.4
Psat5g155240 Pisum sativum HOM05D000092 ORTHO05D005910 1.2e-07 60.8 193 30.1
Lj2g0015463 Lotus japonicus HOM05D000092 ORTHO05D000042 1.6e-07 60.5 218 26.6
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-07 60.1 189 30.2
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 2.1e-07 60.1 189 30.2
Medtr3g467340 Medicago truncatula HOM05D000092 ORTHO05D000042 3.6e-07 59.3 165 30.9
Medtr4g027255 Medicago truncatula HOM05D000092 ORTHO05D000042 4.7e-07 58.9 188 30.9
VMungo0647G2243 Vigna mungo HOM05D000092 ORTHO05D000042 6.2e-07 58.5 193 33.2
Phvul.008G246800 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 1.1e-06 57.8 197 30.5
COL.COLO4_28261 Corchorus olitorius HOM05D000092 ORTHO05D000042 1.4e-06 57.4 220 26.4
Gohir.A04G037500 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.4e-06 57.4 230 26.1
Medtr3g466520 Medicago truncatula HOM05D000092 ORTHO05D000042 1.4e-06 57.4 166 30.7
Phvul.008G244900 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 1.4e-06 57.4 199 27.6
Ciclev10018706m.g Citrus clementina HOM05D000092 ORTHO05D000042 1.8e-06 57.0 111 36.9
Thecc.05G155500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.8e-06 57.0 224 26.8
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 5.2e-06 55.5 195 28.2
Gorai.011G258800 Gossypium raimondii HOM05D000092 ORTHO05D000042 6.8e-06 55.1 217 26.3
Ca_06450_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 8.9e-06 54.7 162 33.3
Gohir.D05G345250 Gossypium hirsutum HOM05D000092 ORTHO05D000042 8.9e-06 54.7 211 24.2


User provided reference genes

Program Settings