Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38951 Trifolium pratense HOM05D008382 ORTHO05D000002 1.1e-34 149.4 78 100.0
EL10Ac5g11786 Beta vulgaris HOM05D000004 ORTHO05D000002 9.5e-18 93.2 73 63.0
RcHm_v2.0_Chr3g0452401 Rosa chinensis HOM05D000004 ORTHO05D000002 6.8e-16 87.0 72 58.3
RcHm_v2.0_Chr3g0461871 Rosa chinensis HOM05D000004 ORTHO05D000002 1.2e-15 86.3 72 58.3
EL10Ac6g14457 Beta vulgaris HOM05D000004 ORTHO05D000002 2.6e-15 85.1 72 61.1
AUR62028416 Chenopodium quinoa HOM05D008382 ORTHO05D000563 3.4e-15 84.7 59 72.9
TWI39G0034 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.2e-13 78.2 72 55.6
CSS0023711 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.9e-11 71.2 72 50.0
CSS0043413 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-10 69.3 72 47.2
CSS0023637 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-10 68.2 72 47.2
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 5.6e-10 67.4 48 66.7
CSS0008496 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.6e-10 67.4 72 50.0
CSS0049161 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.3e-10 67.0 72 47.2
CSS0034640 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.5e-10 66.6 72 45.8
Rhsim06G0164300 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.5e-10 66.6 66 51.5
EL10Ac2g03002 Beta vulgaris HOM05D000004 ORTHO05D000002 1.2e-09 66.2 48 66.7
RcHm_v2.0_Chr4g0427231 Rosa chinensis HOM05D000004 ORTHO05D000002 1.6e-09 65.9 71 46.5
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 2.8e-09 65.1 63 52.4
Rhsim02G0214500 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.6e-09 64.7 65 50.8
EL10Ac4g08502 Beta vulgaris HOM05D020836 ORTHO05D000002 8.0e-09 63.5 48 62.5
CSS0011571 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.0e-09 63.5 72 47.2
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-08 63.2 72 45.8
CSS0022143 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-08 61.6 72 44.4
FvH4_4g14287 Fragaria vesca HOM05D000004 ORTHO05D000002 4.0e-08 61.2 55 54.5
TWI32G0910 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.0e-08 61.2 72 45.8
Rhsim08G0165700 Rhododendron simsii HOM05D011420 ORTHO05D019352 1.5e-07 59.3 59 50.8
Rhsim10G0140700 Rhododendron simsii HOM05D002417 ORTHO05D002589 2.0e-07 58.9 59 50.8
FvH4_4g12741 Fragaria vesca HOM05D000004 ORTHO05D000002 5.8e-07 57.4 72 43.1
Rhsim11G0041000 Rhododendron simsii HOM05D008628 ORTHO05D010443 5.8e-07 57.4 51 54.9
Rhsim12G0085900 Rhododendron simsii HOM05D000260 ORTHO05D000318 5.8e-07 57.4 50 52.0
Rhsim05G0064200 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.2e-06 55.5 44 59.1
Rhsim03G0085600 Rhododendron simsii HOM05D001775 ORTHO05D008700 3.7e-06 54.7 44 59.1
Rhsim06G0132400 Rhododendron simsii HOM05D064830 ORTHO05D000002 6.4e-06 53.9 44 59.1
Medtr2g009960 Medicago truncatula HOM05D035074 ORTHO05D036733 8.3e-06 53.5 50 56.0


User provided reference genes

Program Settings