Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38936 Trifolium pratense HOM05D000196 ORTHO05D051451 5.2e-190 667.5 331 100.0
TPR.G27882 Trifolium pratense HOM05D000196 ORTHO05D051451 1.4e-171 606.3 331 91.8
Psat6g027120 Pisum sativum HOM05D000196 ORTHO05D000279 1.1e-70 271.2 334 48.8
Medtr1g013170 Medicago truncatula HOM05D000196 ORTHO05D000279 5.7e-64 248.8 282 56.4
Medtr1g013180 Medicago truncatula HOM05D000196 ORTHO05D000279 5.2e-57 225.7 348 45.1
Glyma.17G217100 Glycine max HOM05D000196 ORTHO05D000279 5.9e-45 185.7 381 39.6
Glyma.14G110600 Glycine max HOM05D000196 ORTHO05D000279 8.9e-41 171.8 378 37.3
arahy.Tifrunner.gnm1.ann1.QIR43M Arachis hypogaea HOM05D000196 ORTHO05D000279 6.0e-37 159.1 398 35.9
VMungo1309G2541 Vigna mungo HOM05D000196 ORTHO05D000279 2.3e-36 157.1 389 36.5
Lj5g0016527 Lotus japonicus HOM05D000196 ORTHO05D000279 3.0e-36 156.8 336 37.5
Glyma.06G063500 Glycine max HOM05D000196 ORTHO05D000279 4.3e-35 152.9 397 35.3
Phvul.009G088850 Phaseolus vulgaris HOM05D000196 ORTHO05D000279 5.6e-35 152.5 403 33.5
Lj1g0021103 Lotus japonicus HOM05D000196 ORTHO05D000279 1.1e-33 148.3 376 36.2
arahy.Tifrunner.gnm1.ann1.N8Q6VK Arachis hypogaea HOM05D000196 ORTHO05D000279 1.4e-33 147.9 398 34.7
Medtr3g106220 Medicago truncatula HOM05D000196 ORTHO05D000279 1.4e-33 147.9 382 36.1
Psat5g031840 Pisum sativum HOM05D000196 ORTHO05D000279 1.2e-32 144.8 391 35.5
TPR.G3110 Trifolium pratense HOM05D000196 ORTHO05D000279 6.4e-31 139.0 389 35.2
Ca_13054_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 5.4e-30 136.0 276 42.8
Glyma.04G062500 Glycine max HOM05D000196 ORTHO05D000279 1.6e-29 134.4 395 34.2
Phvul.001G046300 Phaseolus vulgaris HOM05D000196 ORTHO05D000279 2.5e-27 127.1 324 36.1
VMungo0647G0071 Vigna mungo HOM05D000196 ORTHO05D000279 2.5e-27 127.1 378 32.5
Lj5g0024540 Lotus japonicus HOM05D000196 ORTHO05D000279 1.1e-25 121.7 241 40.7
Lj5g0001974 Lotus japonicus HOM05D000196 ORTHO05D000279 2.3e-25 120.6 218 42.2
Lalb_Chr14g0361821 Lupinus albus HOM05D000196 ORTHO05D000279 6.8e-25 119.0 320 34.1
Lalb_Chr08g0244351 Lupinus albus HOM05D000196 ORTHO05D000279 8.9e-25 118.6 391 34.3
Lj5g0006545 Lotus japonicus HOM05D000196 ORTHO05D000279 1.9e-22 110.9 229 38.9
Ca_15765_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 4.1e-22 109.8 383 32.4
Cfa013081 Carpinus fangiana HOM05D000196 ORTHO05D000279 1.9e-19 100.9 409 29.3
Haze_21438 Corylus avellana HOM05D000196 ORTHO05D000279 3.6e-18 96.7 424 29.2
Medtr7g117705 Medicago truncatula HOM05D000196 ORTHO05D000279 4.7e-18 96.3 179 38.5
QL02p019756 Quercus lobata HOM05D000196 ORTHO05D000279 4.0e-17 93.2 402 29.1
arahy.Tifrunner.gnm1.ann1.8WUN2S Arachis hypogaea HOM05D000196 ORTHO05D000279 8.9e-17 92.0 348 30.2
Prupe.1G391400 Prunus persica HOM05D000196 ORTHO05D000279 2.1e-13 80.9 403 27.3
Dinv16474 Davidia involucrata HOM05D000196 ORTHO05D000279 6.6e-12 75.9 412 27.9
CiPaw.08G007200 Carya illinoinensis HOM05D000196 ORTHO05D000279 7.3e-11 72.4 218 34.9
FAN27G0309 Fragaria x ananassa HOM05D000196 ORTHO05D000279 1.6e-10 71.2 385 27.0
FAN20G2223 Fragaria x ananassa HOM05D000196 ORTHO05D000279 5.3e-09 66.2 387 27.6
MD08G1059000 Malus domestica HOM05D000196 ORTHO05D000279 5.3e-09 66.2 367 28.6
Lalb_Chr23g0268301 Lupinus albus HOM05D000196 ORTHO05D000279 6.9e-09 65.9 148 36.5
Sabra18G0023900 Salix brachista HOM05D000196 ORTHO05D000279 9.0e-09 65.5 208 30.8
Actinidia23095 Actinidia chinensis HOM05D000196 ORTHO05D000279 1.2e-08 65.1 371 25.3
FvH4_2g40890 Fragaria vesca HOM05D000196 ORTHO05D000279 1.2e-08 65.1 389 27.0
RcHm_v2.0_Chr6g0299681 Rosa chinensis HOM05D000196 ORTHO05D000279 2.0e-08 64.3 393 26.5
Ciclev10007639m.g Citrus clementina HOM05D000196 ORTHO05D000279 2.6e-08 63.9 213 33.3
FAN15G2107 Fragaria x ananassa HOM05D000196 ORTHO05D000279 3.4e-08 63.5 387 26.9
CiPaw.07G228400 Carya illinoinensis HOM05D000196 ORTHO05D000279 4.2e-06 56.6 332 25.6


User provided reference genes

Program Settings