Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G389 Trifolium pratense HOM05D004532 ORTHO05D000028 7.6e-51 203.8 119 100.0
Medtr5g061740 Medicago truncatula HOM05D004532 ORTHO05D000028 2.4e-41 172.2 122 79.5
Psat2g075120 Pisum sativum HOM05D004532 ORTHO05D000028 4.6e-40 167.9 117 82.9
Ca_05235_v3 Cicer arietinum L. HOM05D004532 ORTHO05D000028 1.9e-38 162.5 119 71.4
Medtr4g084740 Medicago truncatula HOM05D004532 ORTHO05D000028 3.1e-36 155.2 120 69.2
Lj1g0009703 Lotus japonicus HOM05D004532 ORTHO05D000028 1.4e-28 129.8 124 58.1
Glyma.14G168700 Glycine max HOM05D004532 ORTHO05D000028 4.5e-27 124.8 113 57.5
Glyma.13G086400 Glycine max HOM05D004532 ORTHO05D000028 6.5e-26 120.9 121 57.0
Phvul.008G170400 Phaseolus vulgaris HOM05D004532 ORTHO05D000028 6.5e-26 120.9 125 53.6
Lalb_Chr10g0102161 Lupinus albus HOM05D004532 ORTHO05D000028 4.2e-17 91.7 118 50.8
arahy.Tifrunner.gnm1.ann1.GBX0EQ Arachis hypogaea HOM05D004532 ORTHO05D000028 1.7e-13 79.7 117 46.2
arahy.Tifrunner.gnm1.ann1.XXIH72 Arachis hypogaea HOM05D004532 ORTHO05D000028 2.2e-13 79.3 117 46.2
Lalb_Chr23g0270701 Lupinus albus HOM05D004532 ORTHO05D000028 2.8e-13 79.0 121 42.1
Nn1g08850 Nelumbo nucifera HOM05D004532 ORTHO05D000028 3.0e-07 58.9 102 33.3
Prupe.1G511300 Prunus persica HOM05D004532 ORTHO05D000028 5.1e-07 58.2 116 35.3
Ciclev10003964m.g Citrus clementina HOM05D004532 ORTHO05D000028 8.8e-07 57.4 119 35.3
Manes.02G156400 Manihot esculenta HOM05D004532 ORTHO05D000028 3.3e-06 55.5 110 34.5
FAN19G0322 Fragaria x ananassa HOM05D004532 ORTHO05D000028 4.4e-06 55.1 109 34.9
FAN28G0341 Fragaria x ananassa HOM05D004532 ORTHO05D000028 7.4e-06 54.3 109 33.9


User provided reference genes

Program Settings