Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38894 Trifolium pratense HOM05D007824 ORTHO05D009875 2.7e-51 205.3 124 100.0
Psat6g024640 Pisum sativum HOM05D007824 ORTHO05D009875 2.7e-14 82.4 66 86.4
Medtr1g013350 Medicago truncatula HOM05D007824 ORTHO05D009875 7.2e-12 74.3 43 83.7
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 4.9e-08 61.6 48 62.5
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 1.8e-07 59.7 43 67.4
Glyma.14G104600 Glycine max HOM05D007824 ORTHO05D009875 2.4e-07 59.3 43 65.1
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 2.4e-07 59.3 43 67.4
Lj5g0022212 Lotus japonicus HOM05D007824 ORTHO05D009875 7.0e-07 57.8 66 50.0
arahy.Tifrunner.gnm1.ann1.58R7DF Arachis hypogaea HOM05D007824 ORTHO05D009875 9.2e-07 57.4 39 69.2
arahy.Tifrunner.gnm1.ann1.A82CWH Arachis hypogaea HOM05D007824 ORTHO05D009875 9.2e-07 57.4 39 69.2
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 1.2e-06 57.0 45 64.4
Glyma.17G221200 Glycine max HOM05D007824 ORTHO05D009875 1.2e-06 57.0 44 65.9
unitig_46.g18221 Utricularia gibba HOM05D007824 ORTHO05D009875 1.2e-06 57.0 71 46.5
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.7e-06 55.8 44 63.6
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 3.5e-06 55.5 43 62.8
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 3.5e-06 55.5 43 62.8
RcHm_v2.0_Chr6g0299081 Rosa chinensis HOM05D007824 ORTHO05D009875 3.5e-06 55.5 67 50.7
MELO3C016940.2 Cucumis melo HOM05D007824 ORTHO05D009875 4.5e-06 55.1 45 62.2
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 5.9e-06 54.7 35 74.3


User provided reference genes

Program Settings