Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38871 Trifolium pratense HOM05D003216 ORTHO05D002268 3.4e-149 531.6 254 100.0
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 4.7e-58 228.8 116 93.1
TPR.G28022 Trifolium pratense HOM05D003216 ORTHO05D002268 6.6e-52 208.4 122 81.1
TPR.G22718 Trifolium pratense HOM05D003216 ORTHO05D002268 1.5e-51 207.2 120 81.7
TPR.G9575 Trifolium pratense HOM05D003216 ORTHO05D009933 2.2e-47 193.4 123 75.6
TPR.G20309 Trifolium pratense HOM05D003216 ORTHO05D002268 4.9e-47 192.2 122 74.6
TPR.G14425 Trifolium pratense HOM05D003216 ORTHO05D002268 4.1e-46 189.1 122 73.0
TPR.G22805 Trifolium pratense HOM05D003216 ORTHO05D002268 4.6e-45 185.7 100 85.0
TPR.G8192 Trifolium pratense HOM05D003216 ORTHO05D002268 6.0e-45 185.3 122 68.0
TPR.G31202 Trifolium pratense HOM05D009380 ORTHO05D009933 1.0e-44 184.5 122 71.3
TPR.G35306 Trifolium pratense HOM05D003216 ORTHO05D002268 1.3e-44 184.1 122 68.9
TPR.G31505 Trifolium pratense HOM05D003216 ORTHO05D002268 1.3e-36 157.5 112 64.3
TPR.G25329 Trifolium pratense HOM05D009380 ORTHO05D009933 1.2e-34 151.0 87 77.0
TPR.G36380 Trifolium pratense HOM05D003216 ORTHO05D002268 7.6e-32 141.7 122 55.7
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 9.2e-30 134.8 125 52.0
Medtr8g446690 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-27 127.1 122 53.3
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 3.3e-27 126.3 115 49.6
TPR.G22845 Trifolium pratense HOM05D003216 ORTHO05D002268 4.3e-27 125.9 115 50.4
TPR.G27562 Trifolium pratense HOM05D003216 ORTHO05D002268 5.6e-27 125.6 117 49.6
TPR.G32043 Trifolium pratense HOM05D003216 ORTHO05D002268 2.1e-26 123.6 117 48.7
TPR.G17632 Trifolium pratense HOM05D003216 ORTHO05D002268 8.1e-26 121.7 117 49.6
TPR.G14065 Trifolium pratense HOM05D003216 ORTHO05D002268 1.8e-25 120.6 134 50.7
TPR.G40729 Trifolium pratense HOM05D003216 ORTHO05D002268 4.0e-25 119.4 121 52.9
TPR.G16425 Trifolium pratense HOM05D003216 ORTHO05D002268 3.4e-24 116.3 116 46.6
Medtr2g461120 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-23 114.0 96 53.1
TPR.G17160 Trifolium pratense HOM05D003216 ORTHO05D002268 6.4e-23 112.1 126 46.8
TPR.G40558 Trifolium pratense HOM05D003216 ORTHO05D002268 8.4e-23 111.7 129 48.8
TPR.G14047 Trifolium pratense HOM05D003216 ORTHO05D002268 4.2e-22 109.4 125 49.6
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 7.1e-22 108.6 125 44.8
TPR.G20359 Trifolium pratense HOM05D003216 ORTHO05D002268 2.1e-21 107.1 104 51.9
Medtr8g040220 Medicago truncatula HOM05D003216 ORTHO05D002268 3.9e-20 102.8 121 41.3
Medtr1g051465 Medicago truncatula HOM05D003216 ORTHO05D002268 8.7e-20 101.7 141 41.8
Medtr3g014480 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-19 101.3 123 41.5
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-19 100.9 141 40.4
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-19 100.5 121 43.8
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 3.3e-19 99.8 141 40.4
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 7.3e-19 98.6 98 45.9
Medtr8g017510 Medicago truncatula HOM05D003216 ORTHO05D002268 7.3e-19 98.6 124 41.9
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-18 97.8 139 40.3
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 3.6e-18 96.3 111 43.2
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 4.8e-18 95.9 125 41.6
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 4.8e-18 95.9 141 39.7
Medtr1g064700 Medicago truncatula HOM05D003216 ORTHO05D002268 8.1e-18 95.1 124 39.5
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-17 94.7 122 41.0
Medtr1g016820 Medicago truncatula HOM05D003216 ORTHO05D002268 3.1e-17 93.2 141 39.0
Medtr3g437080 Medicago truncatula HOM05D003216 ORTHO05D002268 5.3e-17 92.4 82 48.8
Medtr7g024793 Medicago truncatula HOM05D003216 ORTHO05D002268 5.3e-17 92.4 89 48.3
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 5.3e-17 92.4 124 41.1
TPR.G38697 Trifolium pratense HOM05D003216 ORTHO05D002268 6.9e-17 92.0 75 49.3
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-16 90.5 118 42.4
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-16 90.5 124 38.7
TPR.G40026 Trifolium pratense HOM05D003216 ORTHO05D002268 2.6e-16 90.1 82 53.7
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 3.4e-16 89.7 98 41.8
Medtr4g065057 Medicago truncatula HOM05D003216 ORTHO05D002268 7.6e-16 88.6 98 42.9
TPR.G7282 Trifolium pratense HOM05D003216 ORTHO05D002268 1.3e-15 87.8 63 66.7
TPR.G754 Trifolium pratense HOM05D003216 ORTHO05D002268 1.7e-15 87.4 63 66.7
Medtr1g111720 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-15 87.0 132 34.1
Medtr2g067680 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-15 87.0 108 38.0
Medtr6g084230 Medicago truncatula HOM05D003216 ORTHO05D002268 3.8e-15 86.3 127 38.6
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 1.1e-14 84.7 51 72.5
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 2.4e-14 83.6 100 41.0
Medtr7g004990 Medicago truncatula HOM05D003216 ORTHO05D002268 3.2e-14 83.2 106 40.6
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 2.1e-13 80.5 99 42.4
TPR.G17165 Trifolium pratense HOM05D003216 ORTHO05D002268 7.9e-13 78.6 80 50.0
Medtr8g465330 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-12 77.4 118 33.1
Medtr5g032220 Medicago truncatula HOM05D000593 ORTHO05D000562 3.0e-12 76.6 182 28.0
TPR.G30694 Trifolium pratense HOM05D003216 ORTHO05D002268 3.9e-12 76.3 70 44.3
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.5e-11 73.6 99 39.4
Medtr3g104445 Medicago truncatula HOM05D003216 ORTHO05D002268 2.5e-11 73.6 103 36.9
Medtr8g409330 Medicago truncatula HOM05D003216 ORTHO05D002268 3.3e-11 73.2 141 35.5
TPR.G30425 Trifolium pratense HOM05D003216 ORTHO05D002268 7.4e-11 72.0 45 77.8
Medtr5g037560 Medicago truncatula HOM05D003216 ORTHO05D002268 9.6e-11 71.6 94 39.4
Medtr5g039360 Medicago truncatula HOM05D003216 ORTHO05D002268 9.6e-11 71.6 71 47.9
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 1.6e-10 70.9 92 39.1
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.1e-10 70.5 108 36.1
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.6e-10 69.7 99 38.4
Medtr1g101180 Medicago truncatula HOM05D003216 ORTHO05D002268 4.8e-10 69.3 121 31.4
Medtr8g463980 Medicago truncatula HOM05D003216 ORTHO05D002268 4.8e-10 69.3 121 30.6
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 6.2e-10 68.9 104 35.6
PSO729G0006 Papaver somniferum HOM05D013875 ORTHO05D002268 6.2e-10 68.9 97 36.1
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.1e-10 68.6 104 34.6
CSS0030203 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.1e-09 68.2 99 37.4
Medtr6g086765 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-09 68.2 76 47.4
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.4e-09 67.8 103 36.9
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-09 67.8 80 41.2
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.4e-09 67.0 97 32.0
Ca_01383_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 3.1e-09 66.6 90 41.1
Medtr3g463860 Medicago truncatula HOM05D003216 ORTHO05D002268 4.0e-09 66.2 121 33.9
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 5.3e-09 65.9 95 34.7
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.9e-09 65.5 98 37.8
CSS0009299 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-08 64.3 108 34.3
Ca_14497_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.5e-08 64.3 121 31.4
Medtr6g084295 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-08 64.3 49 51.0
Medtr3g087410 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-08 63.5 124 33.9
CSS0013856 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.4e-08 63.2 97 36.1
Medtr2g436740 Medicago truncatula HOM05D003216 ORTHO05D002268 3.4e-08 63.2 56 50.0
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 3.4e-08 63.2 97 30.9
TPR.G34082 Trifolium pratense HOM05D052800 ORTHO05D411425 4.5e-08 62.8 37 89.2
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.5e-08 62.8 181 29.3
TPR.G21529 Trifolium pratense HOM05D000814 ORTHO05D005211 5.8e-08 62.4 37 91.9
Medtr1g024975 Medicago truncatula HOM05D003216 ORTHO05D002268 9.9e-08 61.6 54 40.7
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 1.3e-07 61.2 120 35.0
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.3e-07 61.2 120 35.0
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 1.3e-07 61.2 97 36.1
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 1.3e-07 61.2 107 35.5
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 1.7e-07 60.8 106 33.0
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 1.7e-07 60.8 106 33.0
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 2.9e-07 60.1 99 35.4
Medtr6g089230 Medicago truncatula HOM05D003216 ORTHO05D004526 2.9e-07 60.1 49 49.0
Medtr8g465250 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-07 60.1 56 37.5
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.8e-07 59.7 100 36.0
Medtr2g067910 Medicago truncatula HOM05D003216 ORTHO05D002268 4.9e-07 59.3 54 40.7
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 6.4e-07 58.9 97 35.1
Medtr2g101530 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-07 58.9 55 40.0
Medtr7g095760 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-07 58.9 59 47.5
TPR.G1696 Trifolium pratense HOM05D009380 ORTHO05D009933 8.4e-07 58.5 32 81.2
Medtr2g461930 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-06 58.2 98 33.7
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 1.4e-06 57.8 169 25.4
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 1.4e-06 57.8 169 25.4
PSO729G0017 Papaver somniferum HOM05D013875 ORTHO05D002268 1.9e-06 57.4 120 29.2
TPR.G17604 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-06 57.0 42 61.9
CSS0014323 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.2e-06 56.6 108 33.3
Migut.D01883 Erythranthe guttata HOM05D000593 ORTHO05D000562 3.2e-06 56.6 92 33.7
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 5.5e-06 55.8 98 30.6
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 5.5e-06 55.8 98 30.6
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 5.5e-06 55.8 98 30.6
Aqoxy3G00378 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 7.1e-06 55.5 117 35.9
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.1e-06 55.5 82 34.1
TPR.G18817 Trifolium pratense HOM05D052800 ORTHO05D410766 9.3e-06 55.1 34 88.2


User provided reference genes

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