Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 3.1e-81 305.1 152 100.0
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.5e-75 286.2 152 94.1
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 6.7e-68 260.8 170 77.1
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.9e-67 259.2 152 82.2
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 1.3e-66 256.5 152 82.9
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 1.3e-66 256.5 152 82.9
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.7e-63 246.1 152 77.6
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 3.6e-61 238.4 144 79.2
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.3e-60 236.5 152 77.6
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.5e-56 223.0 150 72.7
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 1.4e-54 216.5 147 71.4
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 4.2e-54 214.9 151 70.2
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.6e-53 213.0 147 71.4
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 2.1e-53 212.6 150 68.7
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 7.9e-53 210.7 149 70.5
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 3.0e-52 208.8 149 67.1
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 3.9e-52 208.4 147 69.4
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 5.1e-52 208.0 152 68.4
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 6.7e-52 207.6 149 67.8
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.1e-51 206.8 151 67.5
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.5e-51 206.5 149 66.4
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 2.0e-51 206.1 149 69.1
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 3.3e-51 205.3 146 68.5
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 4.4e-51 204.9 149 67.1
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.7e-50 203.0 123 78.0
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.7e-50 203.0 148 68.9
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 3.7e-50 201.8 147 68.7
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 4.8e-50 201.4 153 66.7
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.1e-49 198.7 159 62.9
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 9.1e-49 197.2 149 62.4
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 4.5e-48 194.9 151 62.3
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 5.9e-48 194.5 151 63.6
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 7.7e-48 194.1 125 75.2
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.3e-47 193.4 148 65.5
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 2.2e-47 192.6 150 65.3
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 3.8e-47 191.8 147 63.3
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 5.0e-47 191.4 152 59.2
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 5.0e-47 191.4 148 61.5
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 6.5e-47 191.0 150 60.0
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 8.5e-47 190.7 151 61.6
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 1.4e-46 189.9 150 58.7
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 2.5e-46 189.1 143 63.6
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 2.5e-46 189.1 150 58.7
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 2.5e-46 189.1 149 62.4
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.5e-46 189.1 150 58.7
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 7.2e-46 187.6 150 62.0
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 7.2e-46 187.6 150 60.7
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 9.4e-46 187.2 151 61.6
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 9.4e-46 187.2 151 62.3
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 1.2e-45 186.8 150 58.7
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.6e-45 186.4 151 58.9
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.6e-45 186.4 151 58.9
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.6e-45 186.4 151 58.9
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.6e-45 186.4 148 63.5
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 2.7e-45 185.7 126 71.4
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 3.6e-45 185.3 151 60.9
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 4.7e-45 184.9 159 61.0
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.1e-45 184.5 148 61.5
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 6.1e-45 184.5 152 56.6
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 7.9e-45 184.1 151 62.3
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 7.9e-45 184.1 151 60.9
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 7.9e-45 184.1 148 62.2
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.0e-44 183.7 145 58.6
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.8e-44 183.0 150 60.7
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 2.3e-44 182.6 150 59.3
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 3.0e-44 182.2 151 57.6
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 3.9e-44 181.8 148 61.5
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 5.2e-44 181.4 152 60.5
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.5e-43 179.9 172 55.2
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 3.3e-43 178.7 144 61.1
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 4.4e-43 178.3 150 57.3
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.3e-42 176.8 125 68.0
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.7e-42 176.4 125 68.0
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.2e-42 176.0 150 56.7
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 3.7e-42 175.3 146 58.2
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 6.3e-42 174.5 150 60.0
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.4e-41 173.3 127 66.9
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 2.4e-41 172.6 172 54.1
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 4.1e-41 171.8 146 57.5
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 4.1e-41 171.8 146 57.5
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 1.6e-40 169.9 178 52.8
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.6e-40 169.9 121 66.1
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 2.6e-40 169.1 152 55.3
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 4.5e-40 168.3 127 63.0
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 8.5e-39 164.1 150 56.7
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 2.7e-37 159.1 126 61.9
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 2.7e-37 159.1 118 66.9
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 3.6e-37 158.7 119 63.9
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.0e-36 157.1 115 67.0
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.8e-36 156.4 123 61.0
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.0e-35 152.9 113 65.5
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 1.7e-31 139.8 114 57.0
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.2e-31 139.4 151 51.0
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 3.8e-31 138.7 112 60.7
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.9e-30 136.3 98 66.3
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 5.5e-30 134.8 111 58.6
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 2.7e-29 132.5 150 49.3
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 2.8e-26 122.5 90 64.4
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 4.8e-26 121.7 149 41.6
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.2e-24 117.1 145 41.4
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 8.5e-23 110.9 80 66.2
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 5.5e-22 108.2 127 40.2
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 6.1e-21 104.8 75 74.7
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 6.1e-21 104.8 147 38.8
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 8.0e-21 104.4 88 61.4
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.3e-20 102.8 71 69.0
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.3e-20 102.8 71 67.6
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 1.5e-19 100.1 142 37.3
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 2.6e-19 99.4 130 37.7
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 3.4e-19 99.0 70 65.7
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 5.7e-19 98.2 71 62.0
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.7e-18 96.7 69 60.9
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.4e-17 92.8 55 83.6
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 2.7e-16 89.4 82 54.9
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 7.3e-14 81.3 98 45.9


User provided reference genes

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