Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38810 Trifolium pratense HOM05D000233 ORTHO05D000020 1.6e-92 343.2 231 100.0
Medtr5g032820 Medicago truncatula HOM05D000233 ORTHO05D000020 2.0e-55 219.9 162 76.5
Psat2g084040 Pisum sativum HOM05D000233 ORTHO05D000020 2.9e-54 216.1 162 72.8
Ca_04558_v3 Cicer arietinum L. HOM05D000233 ORTHO05D000020 2.9e-38 162.9 179 58.1
Phvul.002G149500 Phaseolus vulgaris HOM05D000233 ORTHO05D000020 3.9e-27 125.9 148 52.0
VMungo1215G0111 Vigna mungo HOM05D000233 ORTHO05D000020 5.6e-26 122.1 158 50.0
Glyma.01G025400 Glycine max HOM05D000233 ORTHO05D000020 6.2e-25 118.6 182 47.8
Glyma.02G039300 Glycine max HOM05D000233 ORTHO05D000020 3.5e-20 102.8 175 43.4
Lj2g0025858 Lotus japonicus HOM05D000233 ORTHO05D000020 2.5e-18 96.7 137 47.4
Glyma.18G144700 Glycine max HOM05D000233 ORTHO05D000020 6.9e-16 88.6 148 42.6
Lalb_Chr16g0381871 Lupinus albus HOM05D000233 ORTHO05D000020 2.9e-14 83.2 181 39.2
arahy.Tifrunner.gnm1.ann1.8UYF3G Arachis hypogaea HOM05D000233 ORTHO05D000020 1.9e-13 80.5 131 40.5
QL03p057826 Quercus lobata HOM05D000233 ORTHO05D000020 3.2e-13 79.7 177 36.7
Thecc.02G260900 Theobroma cacao HOM05D000233 ORTHO05D000020 7.1e-13 78.6 177 36.2
Glyma.08G281900 Glycine max HOM05D000233 ORTHO05D000020 9.3e-13 78.2 161 37.3
VMungo0251G2373 Vigna mungo HOM05D000233 ORTHO05D000020 9.3e-13 78.2 177 37.9
Duzib251G0526 Durio zibethinus HOM05D000233 ORTHO05D000020 1.2e-12 77.8 141 39.7
Haze_12253 Corylus avellana HOM05D000233 ORTHO05D000020 1.8e-11 73.9 159 39.0
Phvul.003G064800 Phaseolus vulgaris HOM05D000233 ORTHO05D000020 2.3e-11 73.6 171 39.2
Lalb_Chr05g0216551 Lupinus albus HOM05D000233 ORTHO05D000020 3.0e-11 73.2 181 37.6
Cfa009216 Carpinus fangiana HOM05D000233 ORTHO05D000020 2.5e-10 70.1 184 38.0
Lalb_Chr09g0326091 Lupinus albus HOM05D000233 ORTHO05D000020 2.5e-10 70.1 167 37.1
Psat4g115480 Pisum sativum HOM05D000233 ORTHO05D000020 5.7e-10 68.9 135 38.5
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 5.7e-10 68.9 157 35.0
Gohir.A01G159100 Gossypium hirsutum HOM05D000233 ORTHO05D000020 4.8e-09 65.9 138 36.2
CiPaw.05G181500 Carya illinoinensis HOM05D000233 ORTHO05D000020 6.3e-09 65.5 170 35.3
Gohir.D01G151200 Gossypium hirsutum HOM05D000233 ORTHO05D000020 6.9e-08 62.0 138 35.5
Gohir.D02G158500 Gossypium hirsutum HOM05D000233 ORTHO05D000020 6.9e-08 62.0 140 31.4
Gorai.002G187500 Gossypium raimondii HOM05D000233 ORTHO05D000020 6.9e-08 62.0 138 35.5
Sabra08G0141200 Salix brachista HOM05D000233 ORTHO05D000020 1.2e-07 61.2 151 33.8
arahy.Tifrunner.gnm1.ann1.WBA6PF Arachis hypogaea HOM05D000233 ORTHO05D000020 1.5e-07 60.8 105 38.1
Manes.12G022600 Manihot esculenta HOM05D000233 ORTHO05D000020 1.5e-07 60.8 165 33.9
Gorai.005G177900 Gossypium raimondii HOM05D000233 ORTHO05D000020 2.0e-07 60.5 140 31.4
Duzib268G0734 Durio zibethinus HOM05D000233 ORTHO05D000020 2.6e-07 60.1 177 32.2
Atru.chr11.2142 Acer truncatum HOM05D000233 ORTHO05D000020 7.7e-07 58.5 160 30.6
CiPaw.06G067700 Carya illinoinensis HOM05D000233 ORTHO05D000020 7.7e-07 58.5 153 35.3
Lj4g0001951 Lotus japonicus HOM05D000233 ORTHO05D000020 7.7e-07 58.5 161 34.8
COL.COLO4_24281 Corchorus olitorius HOM05D000233 ORTHO05D000020 1.3e-06 57.8 155 32.3
Dinv14725 Davidia involucrata HOM05D000233 ORTHO05D000020 2.2e-06 57.0 138 35.5
Potri.008G186300 Populus trichocarpa HOM05D000233 ORTHO05D000020 2.2e-06 57.0 147 33.3
Medtr8g069360 Medicago truncatula HOM05D000233 ORTHO05D000020 3.8e-06 56.2 114 40.4
TAR371G0329 Trochodendron aralioides HOM05D000233 ORTHO05D000020 5.0e-06 55.8 139 31.7
Prupe.1G245500 Prunus persica HOM05D000233 ORTHO05D000020 8.5e-06 55.1 168 29.8


User provided reference genes

Program Settings