Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38795 Trifolium pratense HOM05D001219 ORTHO05D001017 3.5e-39 164.5 81 100.0
TPR.G15724 Trifolium pratense HOM05D001219 ORTHO05D001017 3.5e-23 111.3 74 73.0
Medtr4g008420 Medicago truncatula HOM05D001219 ORTHO05D001017 5.6e-21 104.0 74 67.6
Medtr4g006290 Medicago truncatula HOM05D001219 ORTHO05D001017 7.3e-21 103.6 68 75.0
TPR.G29727 Trifolium pratense HOM05D001219 ORTHO05D001017 9.5e-21 103.2 73 69.9
Medtr8g060730 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-20 102.8 68 73.5
Medtr3g110150 Medicago truncatula HOM05D001219 ORTHO05D001017 6.2e-20 100.5 73 64.4
Medtr6g042905 Medicago truncatula HOM05D001219 ORTHO05D001017 8.0e-20 100.1 74 64.9
TPR.G9967 Trifolium pratense HOM05D001219 ORTHO05D001017 1.8e-19 99.0 73 68.5
TPR.G15122 Trifolium pratense HOM05D001219 ORTHO05D001017 3.1e-19 98.2 74 62.2
TPR.G25741 Trifolium pratense HOM05D001219 ORTHO05D001017 5.2e-19 97.4 74 63.5
Medtr4g006240 Medicago truncatula HOM05D001219 ORTHO05D001017 6.8e-19 97.1 74 63.5
TPR.G29719 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-18 96.3 74 62.2
Medtr8g446780 Medicago truncatula HOM05D001219 ORTHO05D001017 2.6e-18 95.1 72 66.7
TPR.G9338 Trifolium pratense HOM05D001219 ORTHO05D001017 9.8e-18 93.2 73 63.0
Medtr7g044870 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-17 92.8 74 63.5
TPR.G9694 Trifolium pratense HOM05D001219 ORTHO05D001017 1.3e-17 92.8 74 59.5
Medtr6g054950 Medicago truncatula HOM05D001219 ORTHO05D001017 1.7e-17 92.4 74 59.5
Medtr4g132730 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-17 92.0 74 62.2
Medtr6g022820 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-17 92.0 74 59.5
Medtr7g029535 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-17 92.0 74 62.2
TPR.G9688 Trifolium pratense HOM05D001219 ORTHO05D001017 2.2e-17 92.0 74 60.8
Medtr6g025290 Medicago truncatula HOM05D001219 ORTHO05D001017 3.7e-17 91.3 73 58.9
TPR.G29724 Trifolium pratense HOM05D001219 ORTHO05D001017 3.7e-17 91.3 74 62.2
TPR.G15124 Trifolium pratense HOM05D001219 ORTHO05D001017 4.9e-17 90.9 74 59.5
TPR.G29931 Trifolium pratense HOM05D001219 ORTHO05D001017 4.9e-17 90.9 74 60.8
Ca_07189_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 6.4e-17 90.5 75 61.3
Medtr1g050478 Medicago truncatula HOM05D001219 ORTHO05D001017 8.3e-17 90.1 74 58.1
Medtr4g024220 Medicago truncatula HOM05D001219 ORTHO05D001017 8.3e-17 90.1 73 57.5
TPR.G15180 Trifolium pratense HOM05D001219 ORTHO05D001017 8.3e-17 90.1 74 58.1
Ca_06859_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.1e-16 89.7 75 61.3
Ca_04901_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.9e-16 89.0 74 59.5
TPR.G15726 Trifolium pratense HOM05D001219 ORTHO05D001017 1.9e-16 89.0 74 59.5
TPR.G29908 Trifolium pratense HOM05D001219 ORTHO05D001017 4.1e-16 87.8 73 63.0
Medtr4g435338 Medicago truncatula HOM05D001219 ORTHO05D001017 5.4e-16 87.4 74 59.5
Medtr1g115380 Medicago truncatula HOM05D001219 ORTHO05D001017 7.0e-16 87.0 74 58.1
Medtr6g018570 Medicago truncatula HOM05D001243 ORTHO05D000843 7.0e-16 87.0 71 59.2
Medtr6g080560 Medicago truncatula HOM05D001219 ORTHO05D001017 7.0e-16 87.0 77 59.7
TPR.G29730 Trifolium pratense HOM05D001219 ORTHO05D001017 7.0e-16 87.0 74 56.8
TPR.G15706 Trifolium pratense HOM05D001219 ORTHO05D001017 9.2e-16 86.7 61 68.9
Medtr4g008490 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-15 86.3 63 68.3
Medtr2g104970 Medicago truncatula HOM05D001219 ORTHO05D001017 1.6e-15 85.9 67 61.2
Medtr6g016910 Medicago truncatula HOM05D001219 ORTHO05D001017 1.6e-15 85.9 74 58.1
TPR.G26002 Trifolium pratense HOM05D001219 ORTHO05D001017 2.7e-15 85.1 72 48.6
Medtr4g008450 Medicago truncatula HOM05D001219 ORTHO05D001017 4.6e-15 84.3 74 56.8
Medtr5g075860 Medicago truncatula HOM05D001219 ORTHO05D001017 4.6e-15 84.3 73 60.3
Medtr6g016915 Medicago truncatula HOM05D001219 ORTHO05D001017 4.6e-15 84.3 73 54.8
Medtr8g076010 Medicago truncatula HOM05D001219 ORTHO05D001017 4.6e-15 84.3 74 56.8
TPR.G15128 Trifolium pratense HOM05D001219 ORTHO05D001017 4.6e-15 84.3 68 61.8
TPR.G29721 Trifolium pratense HOM05D001219 ORTHO05D001017 4.6e-15 84.3 74 55.4
Medtr3g465770 Medicago truncatula HOM05D001219 ORTHO05D001017 6.0e-15 84.0 74 55.4
Medtr4g133640 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-15 83.6 67 62.7
Medtr5g087540 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-15 83.6 74 54.1
Medtr6g016705 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-15 83.6 67 59.7
Medtr4g008330 Medicago truncatula HOM05D001219 ORTHO05D001017 2.3e-14 82.0 74 56.8
TPR.G9682 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-14 82.0 73 54.8
Medtr5g088250 Medicago truncatula HOM05D001219 ORTHO05D001017 3.0e-14 81.6 74 51.4
TPR.G31141 Trifolium pratense HOM05D001219 ORTHO05D001017 3.0e-14 81.6 74 56.8
Medtr4g024200 Medicago truncatula HOM05D001219 ORTHO05D001017 5.0e-14 80.9 66 59.1
TPR.G21482 Trifolium pratense HOM05D001219 ORTHO05D001017 5.0e-14 80.9 75 53.3
TPR.G25998 Trifolium pratense HOM05D001219 ORTHO05D001017 5.0e-14 80.9 61 63.9
Medtr4g021835 Medicago truncatula HOM05D001219 ORTHO05D001017 6.6e-14 80.5 74 55.4
Psat7g258720 Pisum sativum HOM05D001219 ORTHO05D001017 8.6e-14 80.1 74 56.8
TPR.G38777 Trifolium pratense HOM05D001219 ORTHO05D001017 8.6e-14 80.1 74 52.7
TPR.G8602 Trifolium pratense HOM05D001219 ORTHO05D001017 8.6e-14 80.1 60 65.0
Medtr4g006280 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-13 79.7 74 55.4
Medtr5g095830 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-13 79.7 60 63.3
TPR.G22462 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-13 79.7 61 63.9
TPR.G38710 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-13 79.7 60 65.0
Medtr2g007590 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-13 79.3 67 61.2
Medtr5g046730 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-13 79.3 74 51.4
TPR.G16396 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-13 79.3 74 54.1
VMungo0331G0655 Vigna mungo HOM05D001219 ORTHO05D001017 1.5e-13 79.3 74 54.1
Medtr0295s0010 Medicago truncatula HOM05D001219 ORTHO05D001017 2.5e-13 78.6 78 51.3
Psat0s538g0040 Pisum sativum HOM05D001219 ORTHO05D001017 3.3e-13 78.2 69 52.2
Psat7g261360 Pisum sativum HOM05D001219 ORTHO05D001017 5.6e-13 77.4 70 58.6
Medtr4g008340 Medicago truncatula HOM05D001219 ORTHO05D001017 7.3e-13 77.0 74 48.6
Medtr8g067230 Medicago truncatula HOM05D001219 ORTHO05D001017 7.3e-13 77.0 68 60.3
Psat7g041280 Pisum sativum HOM05D001219 ORTHO05D001017 7.3e-13 77.0 67 52.2
Ca_20557_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 9.5e-13 76.6 74 54.1
Ca_30909_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 9.5e-13 76.6 74 54.1
Medtr4g005810 Medicago truncatula HOM05D001219 ORTHO05D001017 9.5e-13 76.6 77 53.2
Psat7g261520 Pisum sativum HOM05D001219 ORTHO05D001017 9.5e-13 76.6 67 50.7
TPR.G1358 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-12 76.3 74 50.0
TPR.G15685 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-12 76.3 74 47.3
TPR.G29734 Trifolium pratense HOM05D001219 ORTHO05D001017 1.6e-12 75.9 67 58.2
Medtr4g008400 Medicago truncatula HOM05D001219 ORTHO05D001017 2.1e-12 75.5 73 52.1
TPR.G29726 Trifolium pratense HOM05D001219 ORTHO05D001017 2.1e-12 75.5 61 59.0
TPR.G38812 Trifolium pratense HOM05D001219 ORTHO05D001017 2.1e-12 75.5 61 57.4
Psat3g054200 Pisum sativum HOM05D001219 ORTHO05D001017 2.8e-12 75.1 74 51.4
Psat7g261440 Pisum sativum HOM05D001219 ORTHO05D001017 2.8e-12 75.1 64 53.1
Medtr3g006050 Medicago truncatula HOM05D001219 ORTHO05D001017 3.6e-12 74.7 68 54.4
Phvul.010G159200 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 3.6e-12 74.7 74 51.4
Psat7g261480 Pisum sativum HOM05D001219 ORTHO05D001017 3.6e-12 74.7 67 50.7
TPR.G38803 Trifolium pratense HOM05D001219 ORTHO05D001017 4.7e-12 74.3 66 53.0
Medtr4g019320 Medicago truncatula HOM05D001219 ORTHO05D001017 6.2e-12 73.9 81 50.6
TPR.G19224 Trifolium pratense HOM05D001219 ORTHO05D001017 8.1e-12 73.6 74 52.7
Medtr1g115390 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-11 72.4 67 56.7
TPR.G1111 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-11 72.0 56 66.1
Medtr3g081260 Medicago truncatula HOM05D001219 ORTHO05D001017 4.0e-11 71.2 54 64.8
Psat3g054040 Pisum sativum HOM05D001219 ORTHO05D001017 4.0e-11 71.2 74 50.0
Psat3g054120 Pisum sativum HOM05D001219 ORTHO05D001017 4.0e-11 71.2 74 50.0
Medtr6g016900 Medicago truncatula HOM05D001219 ORTHO05D001017 6.8e-11 70.5 65 55.4
Medtr4g008380 Medicago truncatula HOM05D001219 ORTHO05D001017 8.9e-11 70.1 56 60.7
Medtr6g027420 Medicago truncatula HOM05D001219 ORTHO05D001017 8.9e-11 70.1 66 59.1
Lj3g0020556 Lotus japonicus HOM05D001219 ORTHO05D001017 1.2e-10 69.7 72 48.6
Medtr3g074570 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-10 69.7 74 47.3
Psat3g054280 Pisum sativum HOM05D001219 ORTHO05D001017 1.2e-10 69.7 74 48.6
Medtr3g008790 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-10 69.3 74 50.0
Medtr4g021765 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-10 69.3 57 59.6
Medtr6g016740 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-10 69.3 54 61.1
Psat3g051760 Pisum sativum HOM05D001219 ORTHO05D001017 1.5e-10 69.3 74 51.4
Psat3g055200 Pisum sativum HOM05D001219 ORTHO05D001017 2.0e-10 68.9 61 57.4
Psat3g055240 Pisum sativum HOM05D001219 ORTHO05D001017 2.0e-10 68.9 74 48.6
Lj3g0011098 Lotus japonicus HOM05D001219 ORTHO05D001017 2.6e-10 68.6 74 48.6
TPR.G37654 Trifolium pratense HOM05D001219 ORTHO05D001017 2.6e-10 68.6 62 51.6
Medtr0041s0060 Medicago truncatula HOM05D001219 ORTHO05D001017 3.4e-10 68.2 54 61.1
TPR.G29733 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-10 68.2 74 47.3
TPR.G9875 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-10 68.2 61 54.1
TPR.G6402 Trifolium pratense HOM05D001219 ORTHO05D001017 5.8e-10 67.4 74 44.6
Psat3g054360 Pisum sativum HOM05D001219 ORTHO05D001017 7.5e-10 67.0 73 47.9
Medtr6g016760 Medicago truncatula HOM05D001219 ORTHO05D001017 9.9e-10 66.6 82 42.7
TPR.G18440 Trifolium pratense HOM05D001219 ORTHO05D001017 1.3e-09 66.2 61 59.0
TPR.G18547 Trifolium pratense HOM05D001219 ORTHO05D001017 1.3e-09 66.2 61 45.9
TPR.G26304 Trifolium pratense HOM05D001219 ORTHO05D001017 1.7e-09 65.9 52 61.5
Medtr1g023530 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-09 65.5 51 62.7
Medtr0807s0010 Medicago truncatula HOM05D001219 ORTHO05D001017 2.9e-09 65.1 61 54.1
TPR.G17814 Trifolium pratense HOM05D001219 ORTHO05D001017 2.9e-09 65.1 61 59.0
THA.LOC104812449 Tarenaya hassleriana HOM05D001219 ORTHO05D001017 3.7e-09 64.7 74 44.6
TPR.G31991 Trifolium pratense HOM05D001219 ORTHO05D001017 3.7e-09 64.7 75 44.0
TPR.G22352 Trifolium pratense HOM05D001219 ORTHO05D001017 4.9e-09 64.3 54 63.0
TPR.G37434 Trifolium pratense HOM05D001219 ORTHO05D001017 4.9e-09 64.3 55 61.8
Lalb_Chr25g0279201 Lupinus albus HOM05D001219 ORTHO05D001017 6.4e-09 63.9 74 44.6
Medtr4g129140 Medicago truncatula HOM05D001219 ORTHO05D001017 6.4e-09 63.9 72 47.2
Psat3g012240 Pisum sativum HOM05D001219 ORTHO05D001017 6.4e-09 63.9 71 49.3
Glyma.08G216300 Glycine max HOM05D001219 ORTHO05D001017 8.3e-09 63.5 74 43.2
Medtr4g009030 Medicago truncatula HOM05D001219 ORTHO05D001017 8.3e-09 63.5 74 41.9
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 1.1e-08 63.2 61 49.2
Psat0s1674g0080 Pisum sativum HOM05D001219 ORTHO05D001017 1.1e-08 63.2 70 48.6
TPR.G18387 Trifolium pratense HOM05D001219 ORTHO05D001017 1.1e-08 63.2 61 59.0
Lj3g0021602 Lotus japonicus HOM05D001219 ORTHO05D001017 1.4e-08 62.8 74 44.6
Medtr3g083280 Medicago truncatula HOM05D001219 ORTHO05D001017 1.4e-08 62.8 69 47.8
Medtr8g045150 Medicago truncatula HOM05D001219 ORTHO05D001017 1.4e-08 62.8 58 53.4
Phvul.010G159100 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 1.4e-08 62.8 61 50.8
Psat7g258680 Pisum sativum HOM05D001219 ORTHO05D001017 1.9e-08 62.4 69 44.9
Medtr4g006250 Medicago truncatula HOM05D001219 ORTHO05D015710 2.4e-08 62.0 54 61.1
TPR.G18559 Trifolium pratense HOM05D001219 ORTHO05D001017 2.4e-08 62.0 61 44.3
TPR.G26006 Trifolium pratense HOM05D001219 ORTHO05D001017 2.4e-08 62.0 54 57.4
TPR.G8970 Trifolium pratense HOM05D001219 ORTHO05D001017 2.4e-08 62.0 75 46.7
arahy.Tifrunner.gnm1.ann1.6H8B8Z Arachis hypogaea HOM05D001219 ORTHO05D001017 3.2e-08 61.6 60 56.7
Medtr2g103530 Medicago truncatula HOM05D001219 ORTHO05D001017 3.2e-08 61.6 51 54.9
Medtr2g078550 Medicago truncatula HOM05D001219 ORTHO05D001017 7.1e-08 60.5 50 58.0
Medtr3g074550 Medicago truncatula HOM05D001219 ORTHO05D001017 9.2e-08 60.1 65 50.8
Medtr5g430490 Medicago truncatula HOM05D001219 ORTHO05D001017 1.2e-07 59.7 53 60.4
TPR.G21219 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-07 59.7 75 44.0
arahy.Tifrunner.gnm1.ann1.158PZX Arachis hypogaea HOM05D001219 ORTHO05D001017 2.1e-07 58.9 60 55.0
arahy.Tifrunner.gnm1.ann1.2CLR18 Arachis hypogaea HOM05D001219 ORTHO05D001017 2.1e-07 58.9 60 55.0
arahy.Tifrunner.gnm1.ann1.8PP8TY Arachis hypogaea HOM05D001219 ORTHO05D001017 2.1e-07 58.9 60 55.0
C06p53900 Brassica napus HOM05D001219 ORTHO05D001017 2.7e-07 58.5 75 41.3
VMungo0331G0565 Vigna mungo HOM05D001219 ORTHO05D001017 2.7e-07 58.5 61 47.5
A07p45070 Brassica napus HOM05D001219 ORTHO05D001017 4.6e-07 57.8 75 41.3
TPR.G15687 Trifolium pratense HOM05D001219 ORTHO05D001017 4.6e-07 57.8 55 58.2
TPR.G16304 Trifolium pratense HOM05D001219 ORTHO05D001017 4.6e-07 57.8 56 55.4
AT1G80630 Arabidopsis thaliana HOM05D001219 ORTHO05D001017 6.0e-07 57.4 65 46.2
Ca_30910_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 6.0e-07 57.4 61 49.2
Medtr8g017160 Medicago truncatula HOM05D001219 ORTHO05D001017 6.0e-07 57.4 62 45.2
Psat7g261760 Pisum sativum HOM05D001219 ORTHO05D001017 6.0e-07 57.4 66 47.0
TPR.G38799 Trifolium pratense HOM05D001219 ORTHO05D001017 6.0e-07 57.4 74 39.2
AL2G40810 Arabidopsis lyrata HOM05D001219 ORTHO05D001017 7.8e-07 57.0 64 46.9
BolC6t40404H Brassica oleracea HOM05D001219 ORTHO05D001017 7.8e-07 57.0 75 41.3
BraA07t32010Z Brassica rapa HOM05D001219 ORTHO05D001017 7.8e-07 57.0 75 42.7
Medtr1g028400 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-07 57.0 72 44.4
arahy.Tifrunner.gnm1.ann1.XM9YH2 Arachis hypogaea HOM05D001219 ORTHO05D001017 1.0e-06 56.6 51 60.8
Medtr8g037780 Medicago truncatula HOM05D001219 ORTHO05D001017 1.0e-06 56.6 66 43.9
arahy.Tifrunner.gnm1.ann1.F6HDT7 Arachis hypogaea HOM05D001219 ORTHO05D001017 1.3e-06 56.2 66 47.0
arahy.Tifrunner.gnm1.ann1.JW8Z9M Arachis hypogaea HOM05D001219 ORTHO05D001017 1.3e-06 56.2 66 47.0
Aa31LG4G910 Aethionema arabicum HOM05D001219 ORTHO05D001017 1.7e-06 55.8 62 48.4
arahy.Tifrunner.gnm1.ann1.T7YMEL Arachis hypogaea HOM05D001219 ORTHO05D001017 2.3e-06 55.5 74 41.9
Medtr6g016750 Medicago truncatula HOM05D001219 ORTHO05D001017 2.3e-06 55.5 73 41.1
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-06 55.5 61 44.3
Potri.003G179100 Populus trichocarpa HOM05D001219 ORTHO05D001017 3.0e-06 55.1 61 44.3
arahy.Tifrunner.gnm1.ann1.2F3432 Arachis hypogaea HOM05D001219 ORTHO05D001017 3.9e-06 54.7 53 58.5
TPR.G22697 Trifolium pratense HOM05D001219 ORTHO05D001017 3.9e-06 54.7 56 51.8
Thhalv10018340m.g Eutrema salsugineum HOM05D001219 ORTHO05D001017 6.6e-06 53.9 63 44.4
Carub.0002s2711 Capsella rubella HOM05D001219 ORTHO05D001017 8.6e-06 53.5 65 44.6
TPR.G23929 Trifolium pratense HOM05D001219 ORTHO05D001017 8.6e-06 53.5 70 51.4
TPR.G7594 Trifolium pratense HOM05D001219 ORTHO05D001017 8.6e-06 53.5 69 42.0


User provided reference genes

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