Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38738 Trifolium pratense HOM05D011393 ORTHO05D013493 1.9e-78 295.8 158 100.0
TPR.G2686 Trifolium pratense HOM05D011393 ORTHO05D013493 1.3e-58 229.9 162 80.9
Medtr5g032760 Medicago truncatula HOM05D011393 ORTHO05D013493 3.8e-42 175.3 167 64.1
Psat2g090480 Pisum sativum HOM05D011393 ORTHO05D013493 1.1e-41 173.7 162 64.2
arahy.Tifrunner.gnm1.ann1.8LZ2EL Arachis hypogaea HOM05D011393 ORTHO05D013493 1.7e-37 159.8 164 60.4
arahy.Tifrunner.gnm1.ann1.GG3KEQ Arachis hypogaea HOM05D011393 ORTHO05D013493 9.2e-36 154.1 150 62.7
Phvul.007G239300 Phaseolus vulgaris HOM05D011393 ORTHO05D013493 1.8e-31 139.8 152 60.5
Ca_04555_v3 Cicer arietinum L. HOM05D011393 ORTHO05D013493 8.9e-31 137.5 164 57.9
Glyma.10G109400 Glycine max HOM05D011393 ORTHO05D013493 1.4e-28 130.2 164 53.7
Lalb_Chr03g0040851 Lupinus albus HOM05D011393 ORTHO05D013493 3.0e-26 122.5 149 56.4
Medtr2g097650 Medicago truncatula HOM05D011393 ORTHO05D013493 1.5e-17 93.6 64 82.8
VMungo0720G0803 Vigna mungo HOM05D011393 ORTHO05D013493 2.5e-17 92.8 82 68.3
Lj6g0004790 Lotus japonicus HOM05D011393 ORTHO05D013493 5.8e-14 81.6 148 45.9
Lj5g0013981 Lotus japonicus HOM05D011393 ORTHO05D013493 7.5e-14 81.3 141 48.2
unitig_8.g4693 Utricularia gibba HOM05D002703 ORTHO05D002921 6.6e-10 68.2 154 39.0
A08p24420 Brassica napus HOM05D004577 ORTHO05D005062 9.5e-09 64.3 160 42.5
BraA08t34397Z Brassica rapa HOM05D004577 ORTHO05D005062 9.5e-09 64.3 160 42.5
C03p76790 Brassica napus HOM05D004577 ORTHO05D005062 1.2e-08 63.9 160 41.9
Sp1g26310 Schrenkiella parvula HOM05D004577 ORTHO05D005062 1.2e-08 63.9 97 51.5
A07p09910 Brassica napus HOM05D004577 ORTHO05D005062 2.1e-08 63.2 148 42.6
BolC3t19933H Brassica oleracea HOM05D004577 ORTHO05D005062 2.1e-08 63.2 101 50.5
BolC7t42015H Brassica oleracea HOM05D004577 ORTHO05D005062 2.8e-08 62.8 150 41.3
BcaNung05263 Brassica carinata HOM05D004577 ORTHO05D005062 3.6e-08 62.4 101 50.5
Carub.0001s2869 Capsella rubella HOM05D004577 ORTHO05D005062 4.7e-08 62.0 148 40.5
Haze_16864 Corylus avellana HOM05D004577 ORTHO05D005062 6.2e-08 61.6 177 38.4
QL08p055193 Quercus lobata HOM05D004577 ORTHO05D005062 1.4e-07 60.5 133 42.1
Oeu021394.1 Olea europaea HOM05D004577 ORTHO05D005062 2.3e-07 59.7 116 44.0
C07p15110 Brassica napus HOM05D004577 ORTHO05D005062 3.1e-07 59.3 119 44.5
BcaB03g13825 Brassica carinata HOM05D004577 ORTHO05D005062 5.2e-07 58.5 97 49.5
unitig_578.g16418 Utricularia gibba HOM05D004577 ORTHO05D005062 5.2e-07 58.5 149 37.6
BcaC01g00196 Brassica carinata HOM05D004577 ORTHO05D005062 6.8e-07 58.2 101 48.5
Migut.M01633 Erythranthe guttata HOM05D004577 ORTHO05D005062 6.8e-07 58.2 132 42.4
Ciclev10009709m.g Citrus clementina HOM05D004577 ORTHO05D005062 1.2e-06 57.4 73 57.5
MBI15_g38535_MAGBIO Magnolia biondii HOM05D004577 ORTHO05D005062 1.2e-06 57.4 102 49.0
Sed0027009 Sechium edule HOM05D004577 ORTHO05D005062 1.2e-06 57.4 102 47.1
Duzib213G0774 Durio zibethinus HOM05D004577 ORTHO05D005062 1.5e-06 57.0 142 40.1
CSS0013049 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 2.6e-06 56.2 112 44.6
Hma1.2p1_3473F.1_g336250 Hydrangea macrophylla HOM05D004577 ORTHO05D005062 2.6e-06 56.2 88 48.9
TWI38G1007 Tripterygium wilfordii HOM05D004577 ORTHO05D005062 2.6e-06 56.2 84 57.1
CSS0030856 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 3.4e-06 55.8 85 52.9
CSS0048553 Camellia sinensis var. sinensis HOM05D004577 ORTHO05D005062 3.4e-06 55.8 85 52.9
TAR627G0729 Trochodendron aralioides HOM05D004577 ORTHO05D005062 3.4e-06 55.8 127 42.5
MSTRG.13031 Avicennia marina HOM05D004577 ORTHO05D005062 4.4e-06 55.5 117 44.4
CARHR029880 Cardamine hirsuta HOM05D004577 ORTHO05D005062 4.4e-06 55.5 98 49.0
MELO3C014068.2 Cucumis melo HOM05D004577 ORTHO05D005062 4.4e-06 55.5 89 49.4
Manes.01G021500 Manihot esculenta HOM05D004577 ORTHO05D005062 4.4e-06 55.5 168 38.1
Potri.001G371500 Populus trichocarpa HOM05D004577 ORTHO05D005062 5.8e-06 55.1 95 47.4
TAR629G1725 Trochodendron aralioides HOM05D004577 ORTHO05D005062 5.8e-06 55.1 98 50.0
Lalb_Chr16g0391221 Lupinus albus HOM05D004577 ORTHO05D005062 7.6e-06 54.7 92 50.0
TWI39G1131 Tripterygium wilfordii HOM05D004577 ORTHO05D005062 7.6e-06 54.7 84 54.8
ClCG10G003880 Citrullus lanatus HOM05D004577 ORTHO05D005062 9.9e-06 54.3 81 51.9
ClCG10G004020 Citrullus lanatus HOM05D004577 ORTHO05D005062 9.9e-06 54.3 81 51.9
ClCG10G004040 Citrullus lanatus HOM05D004577 ORTHO05D005062 9.9e-06 54.3 81 51.9


User provided reference genes

Program Settings