Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38642 Trifolium pratense HOM05D000991 ORTHO05D000848 7.6e-80 300.4 152 100.0
TPR.G10856 Trifolium pratense HOM05D000991 ORTHO05D000848 5.2e-20 101.7 64 81.2
Medtr4g009340 Medicago truncatula HOM05D000991 ORTHO05D000848 3.7e-18 95.5 115 53.0
Psat7g258320 Pisum sativum HOM05D000991 ORTHO05D000848 8.3e-18 94.4 115 50.4
Psat7g258360 Pisum sativum HOM05D000991 ORTHO05D000848 8.3e-18 94.4 117 51.3
Medtr4g009590 Medicago truncatula HOM05D000991 ORTHO05D000848 1.8e-17 93.2 117 51.3
TPR.G38595 Trifolium pratense HOM05D000991 ORTHO05D000848 4.1e-17 92.0 102 56.9
Phvul.010G158100 Phaseolus vulgaris HOM05D000991 ORTHO05D000848 5.9e-16 88.2 61 73.8
Lj3g0007897 Lotus japonicus HOM05D000991 ORTHO05D000848 3.8e-15 85.5 67 67.2
Glyma.08G215200 Glycine max HOM05D000991 ORTHO05D000848 1.5e-14 83.6 95 51.6
Glyma.07G027500 Glycine max HOM05D000991 ORTHO05D000848 3.3e-14 82.4 95 52.6
Glyma.07G027600 Glycine max HOM05D000991 ORTHO05D000848 2.1e-13 79.7 96 53.1
VMungo0331G2052 Vigna mungo HOM05D000991 ORTHO05D000848 3.6e-13 79.0 95 55.8
Medtr4g009620 Medicago truncatula HOM05D000991 ORTHO05D000848 4.7e-13 78.6 81 58.0
Nitab4.5_0002322g0170 Nicotiana tabacum HOM05D000991 ORTHO05D000848 1.4e-12 77.0 87 49.4
vmacro19030 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 8.9e-12 74.3 99 46.5
Oeu044528.1 Olea europaea HOM05D000991 ORTHO05D000848 5.7e-11 71.6 66 54.5
VMungo1383G3427 Vigna mungo HOM05D000991 ORTHO05D000848 5.7e-11 71.6 81 54.3
Peaxi162Scf00332g10028 Petunia axillaris HOM05D000991 ORTHO05D000848 1.3e-10 70.5 102 42.2
TPR.G38643 Trifolium pratense HOM05D000991 ORTHO05D000848 1.7e-10 70.1 111 45.0
arahy.Tifrunner.gnm1.ann1.DWFH4A Arachis hypogaea HOM05D000991 ORTHO05D000848 3.7e-10 68.9 61 55.7
Oeu026255.1 Olea europaea HOM05D000991 ORTHO05D000848 3.7e-10 68.9 88 45.5
Medtr7g017620 Medicago truncatula HOM05D000991 ORTHO05D000848 4.9e-10 68.6 82 51.2
Oeu045121.1 Olea europaea HOM05D000991 ORTHO05D000848 1.1e-09 67.4 95 43.2
Oeu056085.1 Olea europaea HOM05D000991 ORTHO05D000848 1.1e-09 67.4 88 45.5
Actinidia25435 Actinidia chinensis HOM05D000991 ORTHO05D000848 2.4e-09 66.2 61 54.1
CANSAT56G2052 Cannabis sativa HOM05D000991 ORTHO05D000848 2.4e-09 66.2 102 41.2
Cc04_g04770 Coffea canephora HOM05D000991 ORTHO05D000848 2.4e-09 66.2 61 57.4
Lalb_Chr04g0258311 Lupinus albus HOM05D000991 ORTHO05D000848 2.4e-09 66.2 62 62.9
Nitab4.5_0004217g0080 Nicotiana tabacum HOM05D000991 ORTHO05D000848 2.4e-09 66.2 117 39.3
Prupe.3G093800 Prunus persica HOM05D000991 ORTHO05D000848 2.4e-09 66.2 103 41.7
vmacro06414 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 2.4e-09 66.2 89 47.2
Sabra17G0102200 Salix brachista HOM05D000991 ORTHO05D000848 3.2e-09 65.9 64 53.1
Sabra17G0104900 Salix brachista HOM05D000991 ORTHO05D000848 3.2e-09 65.9 64 53.1
Oeu045120.1 Olea europaea HOM05D000991 ORTHO05D000848 4.1e-09 65.5 135 35.6
Phvul.008G024200 Phaseolus vulgaris HOM05D000991 ORTHO05D000848 5.4e-09 65.1 81 53.1
Solyc03g117260.2 Solanum lycopersicum HOM05D000991 ORTHO05D000848 5.4e-09 65.1 81 45.7
TPR.G3236 Trifolium pratense HOM05D000991 ORTHO05D000848 7.0e-09 64.7 62 58.1
Ciclev10027572m.g Citrus clementina HOM05D000991 ORTHO05D000848 9.2e-09 64.3 85 47.1
COL.COLO4_11836 Corchorus olitorius HOM05D000991 ORTHO05D000848 9.2e-09 64.3 98 43.9
Glyma.18G276700 Glycine max HOM05D000991 ORTHO05D000848 9.2e-09 64.3 71 54.9
Sabra16G0218600 Salix brachista HOM05D000991 ORTHO05D000848 9.2e-09 64.3 89 46.1
Eucgr.F03927 Eucalyptus grandis HOM05D000991 ORTHO05D000848 1.6e-08 63.5 61 54.1
Eucgr.F03930 Eucalyptus grandis HOM05D000991 ORTHO05D000848 1.6e-08 63.5 61 54.1
MD17G1218100 Malus domestica HOM05D000991 ORTHO05D000848 1.6e-08 63.5 104 44.2
arahy.Tifrunner.gnm1.ann1.ALB3WU Arachis hypogaea HOM05D000991 ORTHO05D000848 2.7e-08 62.8 90 41.1
CiPaw.02G160200 Carya illinoinensis HOM05D000991 ORTHO05D000848 2.7e-08 62.8 61 49.2
Psat3g194400 Pisum sativum HOM05D000991 ORTHO05D000848 2.7e-08 62.8 82 45.1
Eucgr.F03928 Eucalyptus grandis HOM05D000991 ORTHO05D000848 3.5e-08 62.4 61 52.5
Eucgr.F03929 Eucalyptus grandis HOM05D000991 ORTHO05D000848 3.5e-08 62.4 61 52.5
Nitab4.5_0000373g0250 Nicotiana tabacum HOM05D000991 ORTHO05D000848 3.5e-08 62.4 61 49.2
QL05p033307 Quercus lobata HOM05D000991 ORTHO05D000848 3.5e-08 62.4 95 43.2
Ciclev10027595m.g Citrus clementina HOM05D000991 ORTHO05D000848 5.9e-08 61.6 63 49.2
MD17G1218300 Malus domestica HOM05D000991 ORTHO05D000848 5.9e-08 61.6 104 43.3
Peaxi162Scf00207g00537 Petunia axillaris HOM05D000991 ORTHO05D000848 5.9e-08 61.6 61 50.8
CiPaw.01G251300 Carya illinoinensis HOM05D000991 ORTHO05D000848 7.8e-08 61.2 95 42.1
Ciclev10027367m.g Citrus clementina HOM05D000991 ORTHO05D000848 7.8e-08 61.2 63 46.0
Nn8g39678 Nelumbo nucifera HOM05D000991 ORTHO05D000848 7.8e-08 61.2 90 43.3
Thecc.06G035100 Theobroma cacao HOM05D000991 ORTHO05D000848 1.0e-07 60.8 95 38.9
CSS0006522 Camellia sinensis var. sinensis HOM05D000991 ORTHO05D000848 1.7e-07 60.1 67 46.3
CSS0027718 Camellia sinensis var. sinensis HOM05D000991 ORTHO05D000848 1.7e-07 60.1 67 46.3
Cc04_g04760 Coffea canephora HOM05D000991 ORTHO05D000848 1.7e-07 60.1 61 50.8
Potri.001G337900 Populus trichocarpa HOM05D000991 ORTHO05D000848 1.7e-07 60.1 61 52.5
TAR625G0859 Trochodendron aralioides HOM05D000991 ORTHO05D000848 1.7e-07 60.1 62 53.2
PGR102G1046 Punica granatum HOM05D000991 ORTHO05D000848 2.3e-07 59.7 59 50.8
Rhsim08G0209500 Rhododendron simsii HOM05D000991 ORTHO05D000848 2.3e-07 59.7 117 34.2
CsaV3_7G032080 Cucumis sativus L. HOM05D000991 ORTHO05D000848 3.0e-07 59.3 72 47.2
Lj6P322T12 Lonicera japonica HOM05D000991 ORTHO05D000848 3.0e-07 59.3 61 47.5
Sabra01G0158400 Salix brachista HOM05D000991 ORTHO05D000848 3.0e-07 59.3 61 52.5
Thecc.06G035300 Theobroma cacao HOM05D000991 ORTHO05D000848 3.0e-07 59.3 92 38.0
Cfa001919 Carpinus fangiana HOM05D000991 ORTHO05D000848 5.0e-07 58.5 102 38.2
Ciclev10027562m.g Citrus clementina HOM05D000991 ORTHO05D000848 6.6e-07 58.2 63 47.6
COL.COLO4_11834 Corchorus olitorius HOM05D000991 ORTHO05D000848 6.6e-07 58.2 98 39.8
Lj6P331T56 Lonicera japonica HOM05D000991 ORTHO05D000848 6.6e-07 58.2 61 45.9
Potri.003G024100 Populus trichocarpa HOM05D000991 ORTHO05D000848 6.6e-07 58.2 95 42.1
CANSAT56G3926 Cannabis sativa HOM05D000991 ORTHO05D000848 8.6e-07 57.8 66 48.5
Duzib192G0345 Durio zibethinus HOM05D000991 ORTHO05D000848 8.6e-07 57.8 61 47.5
Potri.001G337800 Populus trichocarpa HOM05D000991 ORTHO05D000848 8.6e-07 57.8 61 52.5
Potri.009G085300 Populus trichocarpa HOM05D000991 ORTHO05D000848 8.6e-07 57.8 85 37.6
Sabra03G0015200 Salix brachista HOM05D000991 ORTHO05D000848 1.1e-06 57.4 61 49.2
Sed0024998 Sechium edule HOM05D000991 ORTHO05D000848 1.1e-06 57.4 59 52.5
CANSAT56G0148 Cannabis sativa HOM05D000991 ORTHO05D000848 1.5e-06 57.0 81 43.2
Ciclev10027555m.g Citrus clementina HOM05D000991 ORTHO05D000848 1.5e-06 57.0 103 37.9
Lj6P330T10 Lonicera japonica HOM05D000991 ORTHO05D000848 1.5e-06 57.0 61 45.9
Nitab4.5_0000373g0220 Nicotiana tabacum HOM05D000991 ORTHO05D000848 1.5e-06 57.0 103 34.0
Potri.017G124100 Populus trichocarpa HOM05D000991 ORTHO05D000848 1.5e-06 57.0 100 34.0
Haze_16623 Corylus avellana HOM05D000991 ORTHO05D000848 1.9e-06 56.6 96 40.6
ClCG07G012330 Citrullus lanatus HOM05D000991 ORTHO05D000848 2.5e-06 56.2 59 47.5
Duzib235G1339 Durio zibethinus HOM05D000991 ORTHO05D000848 2.5e-06 56.2 101 35.6
Lj6P136T4 Lonicera japonica HOM05D000991 ORTHO05D000848 2.5e-06 56.2 61 44.3
MBI14_g07749_MAGBIO Magnolia biondii HOM05D000991 ORTHO05D000848 2.5e-06 56.2 61 50.8
Sabra03G0015300 Salix brachista HOM05D000991 ORTHO05D000848 2.5e-06 56.2 97 39.2
CiPaw.02G159600 Carya illinoinensis HOM05D000991 ORTHO05D000848 3.3e-06 55.8 61 44.3
Ciclev10025330m.g Citrus clementina HOM05D000991 ORTHO05D000848 3.3e-06 55.8 63 47.6
PGSC0003DMG400028525 Solanum tuberosum HOM05D000991 ORTHO05D000848 3.3e-06 55.8 89 39.3
MELO3C017852.2 Cucumis melo HOM05D000991 ORTHO05D000848 4.3e-06 55.5 59 45.8
RcHm_v2.0_Chr6g0251731 Rosa chinensis HOM05D000991 ORTHO05D000848 4.3e-06 55.5 103 38.8
Thecc.06G035400 Theobroma cacao HOM05D000991 ORTHO05D000848 4.3e-06 55.5 108 35.2
TWI18G0392 Tripterygium wilfordii HOM05D000991 ORTHO05D000848 4.3e-06 55.5 60 50.0
Cpa.g.sc10.129 Carica papaya HOM05D000991 ORTHO05D000848 5.6e-06 55.1 61 47.5
DCAR_017996 Daucus carota HOM05D000991 ORTHO05D000848 5.6e-06 55.1 83 39.8
Lj5C77T3 Lonicera japonica HOM05D000991 ORTHO05D000848 5.6e-06 55.1 83 39.8
Lj9C496T17 Lonicera japonica HOM05D000991 ORTHO05D000848 5.6e-06 55.1 93 38.7
Manes.04G106700 Manihot esculenta HOM05D000991 ORTHO05D000848 5.6e-06 55.1 93 34.4
RcHm_v2.0_Chr2g0134191 Rosa chinensis HOM05D000991 ORTHO05D000848 5.6e-06 55.1 103 38.8
TWI18G1138 Tripterygium wilfordii HOM05D000991 ORTHO05D000848 5.6e-06 55.1 60 48.3
MELO3C023449.2 Cucumis melo HOM05D000991 ORTHO05D000848 9.5e-06 54.3 71 45.1
Lj6C213T0 Lonicera japonica HOM05D000991 ORTHO05D000848 9.5e-06 54.3 62 41.9
Oeu045119.1 Olea europaea HOM05D000991 ORTHO05D000848 9.5e-06 54.3 61 49.2
TWI18G1334 Tripterygium wilfordii HOM05D000991 ORTHO05D000848 9.5e-06 54.3 89 38.2


User provided reference genes

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