Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38615 Trifolium pratense HOM05D001243 ORTHO05D000843 1.1e-133 479.9 242 100.0
Psat5g293000 Pisum sativum HOM05D001243 ORTHO05D000843 2.0e-26 123.6 190 43.2
TPR.G6588 Trifolium pratense HOM05D001243 ORTHO05D000843 1.3e-25 120.9 249 36.5
Medtr2g099980 Medicago truncatula HOM05D001243 ORTHO05D000843 1.7e-25 120.6 192 40.6
Ca_01206_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 3.8e-25 119.4 198 38.9
Lj3g0003539 Lotus japonicus HOM05D001243 ORTHO05D000843 9.4e-24 114.8 191 37.7
Lalb_Chr01g0013441 Lupinus albus HOM05D001243 ORTHO05D000843 4.0e-22 109.4 189 38.1
arahy.Tifrunner.gnm1.ann1.NJ4UUV Arachis hypogaea HOM05D001243 ORTHO05D000843 1.2e-21 107.8 128 46.1
arahy.Tifrunner.gnm1.ann1.WX0X0K Arachis hypogaea HOM05D001243 ORTHO05D000843 1.2e-21 107.8 128 46.1
Phvul.010G138000 Phaseolus vulgaris HOM05D001243 ORTHO05D000843 1.5e-21 107.5 133 44.4
VMungo0331G1212 Vigna mungo HOM05D001243 ORTHO05D000843 1.5e-21 107.5 133 44.4
Ca_23327_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 4.4e-21 105.9 169 37.9
Glyma.08G192100 Glycine max HOM05D001243 ORTHO05D000843 7.5e-21 105.1 137 44.5
Glyma.07G008900 Glycine max HOM05D001243 ORTHO05D000843 1.3e-20 104.4 158 41.8
TPR.G19275 Trifolium pratense HOM05D001243 ORTHO05D000843 1.3e-20 104.4 166 39.2
Medtr8g017280 Medicago truncatula HOM05D001243 ORTHO05D000843 2.2e-20 103.6 133 42.9
Lalb_Chr04g0263251 Lupinus albus HOM05D001243 ORTHO05D000843 4.8e-20 102.4 133 43.6
Medtr3g006580 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-13 81.3 135 35.6
Medtr5g066560 Medicago truncatula HOM05D001243 ORTHO05D000843 2.0e-13 80.5 135 37.8
Lj1g0010449 Lotus japonicus HOM05D001243 ORTHO05D000843 2.2e-12 77.0 142 35.9
arahy.Tifrunner.gnm1.ann1.FC16B5 Arachis hypogaea HOM05D001243 ORTHO05D000843 5.4e-11 72.4 132 31.1
arahy.Tifrunner.gnm1.ann1.ZEI2BD Arachis hypogaea HOM05D001243 ORTHO05D000843 5.4e-11 72.4 132 31.1
HanXRQChr14g0428541 Helianthus annuus HOM05D001243 ORTHO05D000843 7.0e-11 72.0 184 31.5
Glyma.06G098100 Glycine max HOM05D001243 ORTHO05D000843 1.2e-10 71.2 131 33.6
Medtr7g084080 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-10 71.2 103 39.8
HanXRQChr17g0537021 Helianthus annuus HOM05D001243 ORTHO05D000843 1.6e-10 70.9 130 36.9
Medtr5g044800 Medicago truncatula HOM05D001243 ORTHO05D000843 1.6e-10 70.9 136 33.1
Medtr5g044860 Medicago truncatula HOM05D001243 ORTHO05D000843 1.6e-10 70.9 136 33.1
Ca_16017_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 3.5e-10 69.7 132 34.1
Medtr3g023470 Medicago truncatula HOM05D001243 ORTHO05D000843 3.5e-10 69.7 131 33.6
Glyma.16G195300 Glycine max HOM05D001243 ORTHO05D000843 4.5e-10 69.3 133 31.6
Lj6g0025145 Lotus japonicus HOM05D001243 ORTHO05D000843 4.5e-10 69.3 229 28.4
Medtr3g023270 Medicago truncatula HOM05D001243 ORTHO05D000843 4.5e-10 69.3 131 32.8
Lsat_1_v5_gn_3_26941 Lactuca sativa HOM05D001243 ORTHO05D000843 7.7e-10 68.6 200 29.5
Lj1g0003090 Lotus japonicus HOM05D001243 ORTHO05D000843 7.7e-10 68.6 131 32.8
Medtr4g050930 Medicago truncatula HOM05D001243 ORTHO05D000843 7.7e-10 68.6 104 35.6
Lj1g0019762 Lotus japonicus HOM05D001243 ORTHO05D000843 1.0e-09 68.2 247 27.9
HanXRQChr08g0232091 Helianthus annuus HOM05D001243 ORTHO05D000843 1.3e-09 67.8 104 35.6
Medtr4g090940 Medicago truncatula HOM05D001243 ORTHO05D000843 1.3e-09 67.8 105 38.1
Ca_16015_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 1.7e-09 67.4 134 32.8
Lj1g0013584 Lotus japonicus HOM05D001243 ORTHO05D000843 1.7e-09 67.4 96 37.5
Psat0s4160g0040 Pisum sativum HOM05D001243 ORTHO05D000843 2.3e-09 67.0 96 36.5
Lsat_1_v5_gn_3_26821 Lactuca sativa HOM05D001243 ORTHO05D000843 2.9e-09 66.6 198 30.8
Lj1g0012385 Lotus japonicus HOM05D001243 ORTHO05D000843 2.9e-09 66.6 101 36.6
Duzib133G1329 Durio zibethinus HOM05D001243 ORTHO05D000843 3.8e-09 66.2 118 33.9
Lalb_Chr03g0034441 Lupinus albus HOM05D001243 ORTHO05D000843 3.8e-09 66.2 131 29.8
Medtr8g066650 Medicago truncatula HOM05D001243 ORTHO05D000843 3.8e-09 66.2 189 30.2
Lj1g0016945 Lotus japonicus HOM05D001243 ORTHO05D000843 5.0e-09 65.9 132 32.6
Medtr4g050940 Medicago truncatula HOM05D001243 ORTHO05D000843 5.0e-09 65.9 94 41.5
Medtr4g092360 Medicago truncatula HOM05D001243 ORTHO05D000843 5.0e-09 65.9 94 41.5
Ca_16018_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 6.6e-09 65.5 134 32.8
Ca_18444_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 6.6e-09 65.5 97 39.2
Dinv10493 Davidia involucrata HOM05D001243 ORTHO05D000843 6.6e-09 65.5 181 28.2
Lj1g0004296 Lotus japonicus HOM05D001243 ORTHO05D000843 6.6e-09 65.5 113 34.5
Thecc.10G177900 Theobroma cacao HOM05D000051 ORTHO05D000843 6.6e-09 65.5 143 29.4
TPR.G6301 Trifolium pratense HOM05D001243 ORTHO05D000843 6.6e-09 65.5 133 29.3
TPR.G6356 Trifolium pratense HOM05D001243 ORTHO05D000843 6.6e-09 65.5 133 30.8
HanXRQChr17g0537071 Helianthus annuus HOM05D001243 ORTHO05D000843 8.6e-09 65.1 139 33.1
Lj3g0018350 Lotus japonicus HOM05D001243 ORTHO05D000843 8.6e-09 65.1 186 29.0
Medtr3g005980 Medicago truncatula HOM05D001243 ORTHO05D000843 8.6e-09 65.1 184 28.3
HanXRQChr17g0536611 Helianthus annuus HOM05D001243 ORTHO05D000843 1.1e-08 64.7 189 29.6
HanXRQChr17g0536671 Helianthus annuus HOM05D001243 ORTHO05D000843 1.1e-08 64.7 190 29.5
HanXRQChr17g0536891 Helianthus annuus HOM05D001243 ORTHO05D000843 1.1e-08 64.7 145 32.4
Medtr1g077420 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-08 64.7 114 28.9
ECA234G1514 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.5e-08 64.3 130 33.1
HanXRQChr10g0318831 Helianthus annuus HOM05D001243 ORTHO05D000843 1.9e-08 63.9 191 29.8
TPR.G31640 Trifolium pratense HOM05D001243 ORTHO05D000843 1.9e-08 63.9 115 36.5
TPR.G6047 Trifolium pratense HOM05D001243 ORTHO05D000843 1.9e-08 63.9 132 28.0
HanXRQChr14g0429371 Helianthus annuus HOM05D001243 ORTHO05D000843 2.5e-08 63.5 206 26.2
Lj1g0001805 Lotus japonicus HOM05D001243 ORTHO05D000843 2.5e-08 63.5 256 28.5
Medtr4g045680 Medicago truncatula HOM05D001243 ORTHO05D000843 2.5e-08 63.5 139 32.4
Medtr4g092440 Medicago truncatula HOM05D001243 ORTHO05D000843 2.5e-08 63.5 106 36.8
Thecc.10G178200 Theobroma cacao HOM05D000051 ORTHO05D000843 2.5e-08 63.5 143 30.8
Thecc.10G178500 Theobroma cacao HOM05D000051 ORTHO05D000843 2.5e-08 63.5 143 30.8
HanXRQChr14g0428571 Helianthus annuus HOM05D001243 ORTHO05D000843 3.3e-08 63.2 130 33.8
Medtr3g036330 Medicago truncatula HOM05D001243 ORTHO05D000843 3.3e-08 63.2 106 36.8
Thecc.10G177700 Theobroma cacao HOM05D000051 ORTHO05D000843 3.3e-08 63.2 142 28.9
Thecc.10G177800 Theobroma cacao HOM05D000051 ORTHO05D000843 3.3e-08 63.2 121 31.4
Thecc.10G178800 Theobroma cacao HOM05D000051 ORTHO05D000843 3.3e-08 63.2 143 30.8
TPR.G2514 Trifolium pratense HOM05D001243 ORTHO05D000843 3.3e-08 63.2 103 36.9
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 4.3e-08 62.8 94 40.4
Medtr3g036320 Medicago truncatula HOM05D001243 ORTHO05D000843 4.3e-08 62.8 139 33.1
Medtr4g092430 Medicago truncatula HOM05D001243 ORTHO05D000843 4.3e-08 62.8 94 39.4
RcHm_v2.0_Chr5g0028581 Rosa chinensis HOM05D000051 ORTHO05D000015 4.3e-08 62.8 76 42.1
ECA246G0835 Erigeron canadensis HOM05D001243 ORTHO05D000843 5.6e-08 62.4 185 31.9
HanXRQChr17g0536951 Helianthus annuus HOM05D001243 ORTHO05D000843 5.6e-08 62.4 139 33.8
HanXRQChr17g0537001 Helianthus annuus HOM05D001243 ORTHO05D000843 5.6e-08 62.4 132 34.8
Medtr3g019200 Medicago truncatula HOM05D001243 ORTHO05D000843 5.6e-08 62.4 139 31.7
Actinidia03267 Actinidia chinensis HOM05D001243 ORTHO05D000843 7.3e-08 62.0 231 26.4
HanXRQChr11g0329251 Helianthus annuus HOM05D001243 ORTHO05D000843 7.3e-08 62.0 144 31.2
Medtr1g067190 Medicago truncatula HOM05D001243 ORTHO05D000843 7.3e-08 62.0 240 27.9
Lj2g0015027 Lotus japonicus HOM05D001243 ORTHO05D000843 9.5e-08 61.6 133 28.6
Psat5g213200 Pisum sativum HOM05D001243 ORTHO05D000843 9.5e-08 61.6 130 31.5
arahy.Tifrunner.gnm1.ann1.26WN5G Arachis hypogaea HOM05D001243 ORTHO05D000843 1.2e-07 61.2 133 31.6
HanXRQChr11g0329211 Helianthus annuus HOM05D001243 ORTHO05D000843 1.2e-07 61.2 134 35.1
HanXRQChr17g0536741 Helianthus annuus HOM05D001243 ORTHO05D000843 1.2e-07 61.2 127 32.3
HanXRQChr17g0536961 Helianthus annuus HOM05D001243 ORTHO05D000843 1.2e-07 61.2 128 33.6
Lsat_1_v5_gn_3_26861 Lactuca sativa HOM05D001243 ORTHO05D000843 1.2e-07 61.2 201 28.9
Medtr4g051510 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-07 61.2 96 37.5
Medtr7g080440 Medicago truncatula HOM05D001243 ORTHO05D000843 1.2e-07 61.2 101 33.7
Psat7g104640 Pisum sativum HOM05D001243 ORTHO05D000843 1.2e-07 61.2 115 32.2
TPR.G1001 Trifolium pratense HOM05D001243 ORTHO05D000843 1.2e-07 61.2 115 34.8
TPR.G6327 Trifolium pratense HOM05D001243 ORTHO05D000843 1.2e-07 61.2 186 26.9
Medtr2g101950 Medicago truncatula HOM05D001243 ORTHO05D000843 1.6e-07 60.8 132 30.3
ECA232G1045 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.1e-07 60.5 135 31.1
Medtr4g047950 Medicago truncatula HOM05D001243 ORTHO05D000843 2.1e-07 60.5 260 25.0
Psat6g111120 Pisum sativum HOM05D001243 ORTHO05D000843 2.1e-07 60.5 132 25.8
HanXRQChr05g0143081 Helianthus annuus HOM05D001243 ORTHO05D000843 2.8e-07 60.1 130 31.5
HanXRQChr05g0153961 Helianthus annuus HOM05D001243 ORTHO05D000843 2.8e-07 60.1 187 28.3
HanXRQChr17g0537121 Helianthus annuus HOM05D001243 ORTHO05D000843 2.8e-07 60.1 132 33.3
Medtr3g023490 Medicago truncatula HOM05D001243 ORTHO05D000843 2.8e-07 60.1 89 33.7
HanXRQChr05g0153951 Helianthus annuus HOM05D001243 ORTHO05D000843 3.6e-07 59.7 187 28.3
HanXRQChr10g0318771 Helianthus annuus HOM05D001243 ORTHO05D000843 3.6e-07 59.7 128 32.8
HanXRQChr14g0429351 Helianthus annuus HOM05D001243 ORTHO05D000843 3.6e-07 59.7 135 32.6
HanXRQChr17g0538321 Helianthus annuus HOM05D001243 ORTHO05D000843 3.6e-07 59.7 127 32.3
Medtr3g005990 Medicago truncatula HOM05D001243 ORTHO05D000843 3.6e-07 59.7 146 30.8
Medtr4g014260 Medicago truncatula HOM05D001243 ORTHO05D000843 3.6e-07 59.7 217 25.3
HanXRQChr17g0536821 Helianthus annuus HOM05D001243 ORTHO05D000843 4.7e-07 59.3 131 33.6
Medtr3g023440 Medicago truncatula HOM05D001243 ORTHO05D000843 4.7e-07 59.3 131 33.6
Medtr3g036240 Medicago truncatula HOM05D001243 ORTHO05D000843 4.7e-07 59.3 132 28.0
Medtr3g014550 Medicago truncatula HOM05D001243 ORTHO05D000843 6.1e-07 58.9 101 37.6
Medtr3g463830 Medicago truncatula HOM05D001243 ORTHO05D000843 6.1e-07 58.9 94 38.3
Atru.chr6.3484 Acer truncatum HOM05D001243 ORTHO05D000843 8.0e-07 58.5 187 31.6
ECA238G4855 Erigeron canadensis HOM05D001243 ORTHO05D000843 8.0e-07 58.5 184 29.9
ECA246G0766 Erigeron canadensis HOM05D001243 ORTHO05D000843 8.0e-07 58.5 186 28.0
HanXRQChr17g0536851 Helianthus annuus HOM05D001243 ORTHO05D000843 8.0e-07 58.5 130 33.1
Thecc.10G178400 Theobroma cacao HOM05D001243 ORTHO05D000843 8.0e-07 58.5 143 28.0
HanXRQChr10g0312951 Helianthus annuus HOM05D001243 ORTHO05D000843 1.0e-06 58.2 181 28.7
Medtr3g014590 Medicago truncatula HOM05D001243 ORTHO05D000843 1.0e-06 58.2 101 37.6
Phvul.004G118300 Phaseolus vulgaris HOM05D001243 ORTHO05D000843 1.0e-06 58.2 131 29.8
HanXRQChr10g0318751 Helianthus annuus HOM05D001243 ORTHO05D000843 1.4e-06 57.8 129 33.3
Psat7g105120 Pisum sativum HOM05D001243 ORTHO05D000843 1.4e-06 57.8 103 31.1
COL.COLO4_04517 Corchorus olitorius HOM05D001243 ORTHO05D044682 1.8e-06 57.4 102 30.4
Duzib205G1347 Durio zibethinus HOM05D001243 ORTHO05D000843 1.8e-06 57.4 142 32.4
HanXRQChr17g0536861 Helianthus annuus HOM05D001243 ORTHO05D000843 1.8e-06 57.4 182 28.6
Psat5g156600 Pisum sativum HOM05D001243 ORTHO05D000843 1.8e-06 57.4 149 28.9
ECA246G2499 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.3e-06 57.0 196 28.1
Medtr6g025090 Medicago truncatula HOM05D001243 ORTHO05D000843 2.3e-06 57.0 108 34.3
PSO782G2892 Papaver somniferum HOM05D000051 ORTHO05D000015 2.3e-06 57.0 196 27.6
VMungo0464G2053 Vigna mungo HOM05D001243 ORTHO05D000843 2.3e-06 57.0 131 29.0
C02p11030 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-06 56.6 127 34.6
BolC2t07175H Brassica oleracea HOM05D000051 ORTHO05D000015 3.0e-06 56.6 127 34.6
CSS0025716 Camellia sinensis var. sinensis HOM05D001243 ORTHO05D000843 3.0e-06 56.6 135 30.4
CANSAT56G0180 Cannabis sativa HOM05D000051 ORTHO05D010453 3.0e-06 56.6 135 32.6
Ca_09920_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 3.0e-06 56.6 132 25.0
Lsat_1_v5_gn_0_22301 Lactuca sativa HOM05D001243 ORTHO05D000843 3.0e-06 56.6 133 30.1
Dinv10495 Davidia involucrata HOM05D001243 ORTHO05D000843 4.0e-06 56.2 191 26.7
HanXRQChr17g0536651 Helianthus annuus HOM05D001243 ORTHO05D000843 4.0e-06 56.2 127 30.7
Medtr3g019240 Medicago truncatula HOM05D001243 ORTHO05D000843 4.0e-06 56.2 176 28.4
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 4.0e-06 56.2 106 34.9
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 4.0e-06 56.2 106 34.9
Psat5g213960 Pisum sativum HOM05D001243 ORTHO05D000843 4.0e-06 56.2 55 49.1
RcHm_v2.0_Chr5g0028481 Rosa chinensis HOM05D000051 ORTHO05D000015 4.0e-06 56.2 124 31.5
HanXRQChr17g0536931 Helianthus annuus HOM05D001243 ORTHO05D000843 5.2e-06 55.8 127 31.5
Lsat_1_v5_gn_3_22861 Lactuca sativa HOM05D001243 ORTHO05D000843 5.2e-06 55.8 130 30.0
Medtr3g099900 Medicago truncatula HOM05D001243 ORTHO05D000843 5.2e-06 55.8 118 32.2
Potri.015G011200 Populus trichocarpa HOM05D001243 ORTHO05D000843 5.2e-06 55.8 185 33.0
AT1G80470 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.8e-06 55.5 127 27.6
HanXRQChr04g0111161 Helianthus annuus HOM05D001243 ORTHO05D000843 6.8e-06 55.5 134 32.1
Medtr1g038760 Medicago truncatula HOM05D001243 ORTHO05D000843 6.8e-06 55.5 131 30.5
Carub.0008s0401 Capsella rubella HOM05D000051 ORTHO05D000015 8.9e-06 55.1 128 31.2
Glyma.10G175100 Glycine max HOM05D001243 ORTHO05D000843 8.9e-06 55.1 133 28.6
HanXRQChr17g0536241 Helianthus annuus HOM05D001243 ORTHO05D000843 8.9e-06 55.1 130 34.6
Medtr4g077520 Medicago truncatula HOM05D001243 ORTHO05D000843 8.9e-06 55.1 74 39.2
PSO339G2700 Papaver somniferum HOM05D000051 ORTHO05D009405 8.9e-06 55.1 134 30.6
PSO541G0076 Papaver somniferum HOM05D000051 ORTHO05D000015 8.9e-06 55.1 137 34.3
Phvul.008G272100 Phaseolus vulgaris HOM05D031529 ORTHO05D000843 8.9e-06 55.1 140 27.1
Psat7g106440 Pisum sativum HOM05D001243 ORTHO05D000843 8.9e-06 55.1 93 34.4


User provided reference genes

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